RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 DLX2Q07687 328 aaPredicted RBP16.81■□□□□ 0.28
SYNE4-204ENST00000465425 NDUFAF6Q330K2 333 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 CDONQ4KMG0 1287 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 THOC7Q6I9Y2 204 aaKnown RBP16.81■□□□□ 0.28
SYNE4-204ENST00000465425 RPL22L1Q6P5R6 122 aaKnown RBP16.81■□□□□ 0.28
SYNE4-204ENST00000465425 DPY19L2P2Q6ZN68 376 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 SYT9Q86SS6 491 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 CMIPQ8IY22 773 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 OR6K6Q8NGW6 343 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 PHF21AQ96BD5 680 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 ZFP3Q96NJ6 502 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 NMNAT3Q96T66 252 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 TRAF4Q9BUZ4 470 aaPredicted RBP16.81■□□□□ 0.28
SYNE4-204ENST00000465425 PRTFDC1Q9NRG1 225 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 TRAV6A0A075B6T7 132 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 A0A087WUJ7 227 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 A0A0A6YYJ9 748 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.81■□□□□ 0.28
SYNE4-204ENST00000465425 CTNSO60931 367 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 GATBO75879 557 aaKnown RBP16.81■□□□□ 0.28
SYNE4-204ENST00000465425 ATF1P18846 271 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 ERV3-1Q14264 604 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 OR14A16Q8NHC5 309 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 YIPF2Q9BWQ6 316 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 MED28Q9H204 178 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 LRIT1Q9P2V4 623 aa16.81■□□□□ 0.28
SYNE4-204ENST00000465425 B4DGG1 531 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 SMLR1H3BR10 107 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 TGFBR3LH3BV60 316 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 SERPINI2O75830 405 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 MAT1AQ00266 395 aaKnown RBP16.8■□□□□ 0.28
SYNE4-204ENST00000465425 EIF2B5Q13144 721 aaKnown RBP16.8■□□□□ 0.28
SYNE4-204ENST00000465425 RNASE12Q5GAN4 147 aaKnown RBP16.8■□□□□ 0.28
SYNE4-204ENST00000465425 LYPD4Q6UWN0 246 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 ZNF595Q8IYB9 648 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 ZNF671Q8TAW3 534 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 ZDHHC1Q8WTX9 485 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 HSPA12BQ96MM6 686 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 OR14A2Q96R54 314 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 ZNF337Q9Y3M9 751 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 A0A0B4J203 849 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 SPTY2D1-AS1A0A0U1RR47 76 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 SERINC4A6NH21 518 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 NPIPB9F8W1W9 429 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 ZNF780AO75290 641 aaPredicted RBP16.8■□□□□ 0.28
SYNE4-204ENST00000465425 OR2B3O76000 313 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 IGHV4-34P06331 123 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 CD3GP09693 182 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 UCHL1P09936 223 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 THEGLP0DJG4 465 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 BTCP35070 178 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 DIO1P49895 249 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 MMP15P51511 669 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 BTBD16Q32M84 506 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 HSD17B12Q53GQ0 312 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 OR4C3Q8NH37 302 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 DEDD2Q8WXF8 326 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 PDCD1LG2Q9BQ51 273 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 STMN3Q9NZ72 180 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 MSRAQ9UJ68 235 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 ICAM5Q9UMF0 924 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 ERVK-19Q9WJR5 959 aa16.8■□□□□ 0.28
SYNE4-204ENST00000465425 ZNF879B4DU55 563 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 CT45A8P0DMV1 189 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 CT45A9P0DMV2 189 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 SLC36A2Q495M3 483 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 GXYLT1Q4G148 440 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 CCDC58Q4VC31 144 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 CT45A2Q5DJT8 189 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 ARHGEF39Q8N4T4 335 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 NPEPL1Q8NDH3 523 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 OR4D9Q8NGE8 314 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 C16orf52Q8NHV5 167 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 NECTIN4Q96NY8 510 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 AK6Q9Y3D8 172 aaKnown RBP16.79■□□□□ 0.28
SYNE4-204ENST00000465425 NUBP2Q9Y5Y2 271 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 LRP4O75096 1905 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 BLACEA4D250 179 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 SELENOFO60613 162 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 SRPX2O60687 465 aaPredicted RBP16.79■□□□□ 0.28
SYNE4-204ENST00000465425 IFNA16P05015 189 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 SPI1P17947 270 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 GPR3P46089 330 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 PRPS1P60891 318 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 BTG2P78543 158 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 PRTGQ2VWP7 1150 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 SLC35D3Q5M8T2 416 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 OVCH1Q7RTY7 1134 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 SLITRK4Q8IW52 837 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 BCORP1Q8N888 145 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 YIPF5Q969M3 257 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 HYLS1Q96M11 299 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 OR10A5Q9H207 317 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 NRIP3Q9NQ35 241 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 NCDNQ9UBB6 729 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 SPATA2Q9UM82 520 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 HSPB11Q9Y547 144 aa16.79■□□□□ 0.28
SYNE4-204ENST00000465425 OR2W5A6NFC9 320 aa16.78■□□□□ 0.28
SYNE4-204ENST00000465425 STOMP27105 288 aa16.78■□□□□ 0.28
SYNE4-204ENST00000465425 LBX1P52954 281 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms