RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 SFXN3Q9BWM7 321 aa15.17■□□□□ 0.02
USP39-211ENST00000465282 SRXN1Q9BYN0 137 aa15.17■□□□□ 0.02
USP39-211ENST00000465282 OR11A1Q9GZK7 315 aa15.17■□□□□ 0.02
USP39-211ENST00000465282 CACNA1CQ13936 2221 aa15.16■□□□□ 0.02
USP39-211ENST00000465282 ZC3H12DA2A288 527 aaKnown RBP15.16■□□□□ 0.02
USP39-211ENST00000465282 DNAJC8O75937 253 aaPredicted RBP15.16■□□□□ 0.02
USP39-211ENST00000465282 AHSA1O95433 338 aa15.16■□□□□ 0.02
USP39-211ENST00000465282 CLDN14O95500 239 aa15.16■□□□□ 0.02
USP39-211ENST00000465282 MSX2P35548 267 aaPredicted RBP15.16■□□□□ 0.02
USP39-211ENST00000465282 TAS2R41P59536 307 aa15.16■□□□□ 0.02
USP39-211ENST00000465282 H3F3AP84243 136 aa15.16■□□□□ 0.02
USP39-211ENST00000465282 TRAP1Q12931 704 aaKnown RBP15.16■□□□□ 0.02
USP39-211ENST00000465282 MFSD13AQ14CX5 517 aa15.16■□□□□ 0.02
USP39-211ENST00000465282 SLC25A35Q3KQZ1 300 aa15.16■□□□□ 0.02
USP39-211ENST00000465282 C1orf140Q5VVS0 124 aa15.16■□□□□ 0.02
USP39-211ENST00000465282 NCCRP1Q6ZVX7 275 aaPredicted RBP15.16■□□□□ 0.02
USP39-211ENST00000465282 FCRLAQ7L513 359 aa15.16■□□□□ 0.02
USP39-211ENST00000465282 DHFR2Q86XF0 187 aa15.16■□□□□ 0.02
USP39-211ENST00000465282 MFSD8Q8NHS3 518 aa15.16■□□□□ 0.02
USP39-211ENST00000465282 RNF128Q8TEB7 428 aa15.16■□□□□ 0.02
USP39-211ENST00000465282 PYURFQ96I23 114 aa15.16■□□□□ 0.02
USP39-211ENST00000465282 GMPPAQ96IJ6 420 aaPredicted RBP15.16■□□□□ 0.02
USP39-211ENST00000465282 NAA11Q9BSU3 229 aaPredicted RBP15.16■□□□□ 0.02
USP39-211ENST00000465282 TAPBPLQ9BX59 468 aa15.16■□□□□ 0.02
USP39-211ENST00000465282 SLC19A3Q9BZV2 496 aa15.16■□□□□ 0.02
USP39-211ENST00000465282 MMADHCQ9H3L0 296 aaPredicted RBP15.16■□□□□ 0.02
USP39-211ENST00000465282 RIMS3Q9UJD0 308 aa15.16■□□□□ 0.02
USP39-211ENST00000465282 TRAV36DV7A0A075B6V5 113 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 HTR3EA5X5Y0 456 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 LIPT2A6NK58 231 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 EBAG9O00559 213 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 AQP8O94778 261 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 PRKD3O94806 890 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 ITGA2P17301 1181 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 TNFRSF1BP20333 461 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 OR2B6P58173 313 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 EGR4Q05215 589 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 ST3GAL3Q11203 375 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 PDK3Q15120 406 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 LCN8Q6JVE9 175 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 PPP4R4Q6NUP7 873 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 PGM2L1Q6PCE3 622 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 PAQR6Q6TCH4 344 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 DEF8Q6ZN54 512 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 CYP4Z1Q86W10 505 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 CCDC71Q8IV32 467 aaPredicted RBP15.15■□□□□ 0.02
USP39-211ENST00000465282 MCEMP1Q8IX19 187 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 NAXEQ8NCW5 288 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 RNF217Q8TC41 542 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 INTS12Q96CB8 462 aaKnown RBP15.15■□□□□ 0.02
USP39-211ENST00000465282 SLC41A3Q96GZ6 507 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 PRRC1Q96M27 445 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 HS6ST2Q96MM7 605 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 ZNF426Q9BUY5 554 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 AMBRA1Q9C0C7 1298 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 PIGMQ9H3S5 423 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 KLHL9Q9P2J3 617 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 SLC7A7Q9UM01 511 aa15.15■□□□□ 0.02
USP39-211ENST00000465282 KLF2Q9Y5W3 355 aaPredicted RBP15.15■□□□□ 0.02
USP39-211ENST00000465282 USP9YO00507 2555 aaPredicted RBP15.14■□□□□ 0.01
USP39-211ENST00000465282 SMAD9O15198 467 aaKnown RBP15.14■□□□□ 0.01
USP39-211ENST00000465282 GSC2O15499 205 aa15.14■□□□□ 0.01
USP39-211ENST00000465282 CYTIPO60759 359 aa15.14■□□□□ 0.01
USP39-211ENST00000465282 FZD7O75084 574 aa15.14■□□□□ 0.01
USP39-211ENST00000465282 SS18L1O75177 396 aaPredicted RBP15.14■□□□□ 0.01
USP39-211ENST00000465282 PLGP00747 810 aaPredicted RBP15.14■□□□□ 0.01
USP39-211ENST00000465282 IMPDH2P12268 514 aa15.14■□□□□ 0.01
USP39-211ENST00000465282 HOXB6P17509 224 aaKnown RBP15.14■□□□□ 0.01
USP39-211ENST00000465282 FPR1P21462 350 aa15.14■□□□□ 0.01
USP39-211ENST00000465282 RBM34P42696 430 aaKnown RBP15.14■□□□□ 0.01
USP39-211ENST00000465282 PIN1Q13526 163 aaPredicted RBP15.14■□□□□ 0.01
USP39-211ENST00000465282 GUSBP1Q15486 140 aa15.14■□□□□ 0.01
USP39-211ENST00000465282 FAM69AQ5T7M9 428 aa15.14■□□□□ 0.01
USP39-211ENST00000465282 TTC33Q6PID6 262 aaPredicted RBP15.14■□□□□ 0.01
USP39-211ENST00000465282 FAM214BQ7L5A3 538 aa15.14■□□□□ 0.01
USP39-211ENST00000465282 GDF7Q7Z4P5 450 aa15.14■□□□□ 0.01
USP39-211ENST00000465282 PIGXQ8TBF5 258 aa15.14■□□□□ 0.01
USP39-211ENST00000465282 ROBO4Q8WZ75 1007 aa15.14■□□□□ 0.01
USP39-211ENST00000465282 MCUR1Q96AQ8 359 aa15.14■□□□□ 0.01
USP39-211ENST00000465282 TRIM15Q9C019 465 aa15.14■□□□□ 0.01
USP39-211ENST00000465282 KCNJ16Q9NPI9 418 aa15.14■□□□□ 0.01
USP39-211ENST00000465282 A4GNTQ9UNA3 340 aa15.14■□□□□ 0.01
USP39-211ENST00000465282 EMC9Q9Y3B6 208 aa15.14■□□□□ 0.01
USP39-211ENST00000465282 FAM32AQ9Y421 112 aaKnown RBP15.14■□□□□ 0.01
USP39-211ENST00000465282 ENPP4Q9Y6X5 453 aa15.14■□□□□ 0.01
USP39-211ENST00000465282 DOPEY2Q9Y3R5 2298 aa15.13■□□□□ 0.01
USP39-211ENST00000465282 IGKV1D-42A0A075B6H8 117 aa15.13■□□□□ 0.01
USP39-211ENST00000465282 A0A1W2PNV4 684 aa15.13■□□□□ 0.01
USP39-211ENST00000465282 PDE5AO76074 875 aa15.13■□□□□ 0.01
USP39-211ENST00000465282 VAMP5O95183 116 aa15.13■□□□□ 0.01
USP39-211ENST00000465282 LYPD3O95274 346 aa15.13■□□□□ 0.01
USP39-211ENST00000465282 IGF2P01344 180 aa15.13■□□□□ 0.01
USP39-211ENST00000465282 THY1P04216 161 aa15.13■□□□□ 0.01
USP39-211ENST00000465282 RHCEP18577 417 aa15.13■□□□□ 0.01
USP39-211ENST00000465282 HCFC1P51610 2035 aa15.13■□□□□ 0.01
USP39-211ENST00000465282 CTBP2P56545 445 aa15.13■□□□□ 0.01
USP39-211ENST00000465282 RASGEF1BQ0VAM2 473 aa15.13■□□□□ 0.01
USP39-211ENST00000465282 PLXDC2Q6UX71 529 aa15.13■□□□□ 0.01
USP39-211ENST00000465282 CCDC121Q6ZUS5 278 aa15.13■□□□□ 0.01
USP39-211ENST00000465282 TSPYL5Q86VY4 417 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms