RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 ST7LQ8TDW4 575 aa8.02□□□□□ -1.13
APP-213ENST00000464867 SGCDQ92629 289 aa8.02□□□□□ -1.13
APP-213ENST00000464867 YIPF5Q969M3 257 aa8.02□□□□□ -1.13
APP-213ENST00000464867 TIMD4Q96H15 378 aa8.02□□□□□ -1.13
APP-213ENST00000464867 SLC7A10Q9NS82 523 aa8.02□□□□□ -1.13
APP-213ENST00000464867 NECAP2Q9NVZ3 263 aa8.02□□□□□ -1.13
APP-213ENST00000464867 ASH2LQ9UBL3 628 aa8.02□□□□□ -1.13
APP-213ENST00000464867 CHMP2BQ9UQN3 213 aa8.02□□□□□ -1.13
APP-213ENST00000464867 SLC9A8Q9Y2E8 581 aa8.02□□□□□ -1.13
APP-213ENST00000464867 TNPO3Q9Y5L0 923 aaKnown RBP8.02□□□□□ -1.13
APP-213ENST00000464867 AUP1Q9Y679 476 aa8.02□□□□□ -1.13
APP-213ENST00000464867 CCDC151A5D8V7 595 aa8.01□□□□□ -1.13
APP-213ENST00000464867 WISP3O95389 354 aaPredicted RBP8.01□□□□□ -1.13
APP-213ENST00000464867 HSPA4LO95757 839 aa8.01□□□□□ -1.13
APP-213ENST00000464867 IGHV2-5P01817 119 aa8.01□□□□□ -1.13
APP-213ENST00000464867 IGFBP1P08833 259 aaPredicted RBP8.01□□□□□ -1.13
APP-213ENST00000464867 TFPIP10646 304 aa8.01□□□□□ -1.13
APP-213ENST00000464867 TYK2P29597 1187 aa8.01□□□□□ -1.13
APP-213ENST00000464867 TIA1P31483 386 aaKnown RBP eCLIP8.01□□□□□ -1.13
APP-213ENST00000464867 ELK3P41970 407 aa8.01□□□□□ -1.13
APP-213ENST00000464867 SLC16A1P53985 500 aa8.01□□□□□ -1.13
APP-213ENST00000464867 ALDH18A1P54886 795 aaKnown RBP8.01□□□□□ -1.13
APP-213ENST00000464867 LCN2P80188 198 aa8.01□□□□□ -1.13
APP-213ENST00000464867 TEKQ02763 1124 aa8.01□□□□□ -1.13
APP-213ENST00000464867 ZNF117Q03924 483 aa8.01□□□□□ -1.13
APP-213ENST00000464867 GALNT1Q10472 559 aaPredicted RBP8.01□□□□□ -1.13
APP-213ENST00000464867 SNTB2Q13425 540 aaKnown RBP8.01□□□□□ -1.13
APP-213ENST00000464867 DAG1Q14118 895 aa8.01□□□□□ -1.13
APP-213ENST00000464867 TBRG1Q3YBR2 411 aa8.01□□□□□ -1.13
APP-213ENST00000464867 C11orf87Q6NUJ2 197 aa8.01□□□□□ -1.13
APP-213ENST00000464867 RAPH1Q70E73 1250 aa8.01□□□□□ -1.13
APP-213ENST00000464867 ISCA2Q86U28 154 aa8.01□□□□□ -1.13
APP-213ENST00000464867 OR2L13Q8N349 312 aa8.01□□□□□ -1.13
APP-213ENST00000464867 C1orf52Q8N6N3 182 aaKnown RBP8.01□□□□□ -1.13
APP-213ENST00000464867 POMGNT2Q8NAT1 580 aa8.01□□□□□ -1.13
APP-213ENST00000464867 GLB1L3Q8NCI6 653 aaPredicted RBP8.01□□□□□ -1.13
APP-213ENST00000464867 IL17RDQ8NFM7 739 aa8.01□□□□□ -1.13
APP-213ENST00000464867 JADE3Q92613 823 aa8.01□□□□□ -1.13
APP-213ENST00000464867 RAB1CQ92928 201 aa8.01□□□□□ -1.13
APP-213ENST00000464867 MAGOHBQ96A72 148 aaKnown RBP8.01□□□□□ -1.13
APP-213ENST00000464867 UBXN10Q96LJ8 280 aa8.01□□□□□ -1.13
APP-213ENST00000464867 RBBP8Q99708 897 aa8.01□□□□□ -1.13
APP-213ENST00000464867 KLHDC3Q9BQ90 382 aa8.01□□□□□ -1.13
APP-213ENST00000464867 MRI1Q9BV20 369 aa8.01□□□□□ -1.13
APP-213ENST00000464867 ZNF385DQ9H6B1 395 aa8.01□□□□□ -1.13
APP-213ENST00000464867 NOL11Q9H8H0 719 aaKnown RBP8.01□□□□□ -1.13
APP-213ENST00000464867 EQTNQ9NQ60 294 aa8.01□□□□□ -1.13
APP-213ENST00000464867 MTO1Q9Y2Z2 717 aaKnown RBP8.01□□□□□ -1.13
APP-213ENST00000464867 NOX1Q9Y5S8 564 aa8.01□□□□□ -1.13
APP-213ENST00000464867 NOTCH3Q9UM47 2321 aa8.01□□□□□ -1.13
APP-213ENST00000464867 TET2Q6N021 2002 aaPredicted RBP8□□□□□ -1.13
APP-213ENST00000464867 PPIAL4EA0A075B759 164 aa8□□□□□ -1.13
APP-213ENST00000464867 PPIAL4CA0A0B4J2A2 164 aa8□□□□□ -1.13
APP-213ENST00000464867 PPIAL4DF5H284 164 aa8□□□□□ -1.13
APP-213ENST00000464867 HOXA3O43365 443 aaPredicted RBP8□□□□□ -1.13
APP-213ENST00000464867 FRS3O43559 492 aa8□□□□□ -1.13
APP-213ENST00000464867 CDC14BO60729 498 aa8□□□□□ -1.13
APP-213ENST00000464867 SKAP2O75563 359 aaPredicted RBP8□□□□□ -1.13
APP-213ENST00000464867 FOXH1O75593 365 aa8□□□□□ -1.13
APP-213ENST00000464867 PSMG1O95456 288 aa8□□□□□ -1.13
APP-213ENST00000464867 H6PDO95479 791 aa8□□□□□ -1.13
APP-213ENST00000464867 PF4P02776 101 aa8□□□□□ -1.13
APP-213ENST00000464867 ALOX5P09917 674 aa8□□□□□ -1.13
APP-213ENST00000464867 PPIAL4FP0DN26 164 aa8□□□□□ -1.13
APP-213ENST00000464867 PRPS2P11908 318 aa8□□□□□ -1.13
APP-213ENST00000464867 NTSP30990 170 aa8□□□□□ -1.13
APP-213ENST00000464867 FRG1Q14331 258 aaKnown RBP8□□□□□ -1.13
APP-213ENST00000464867 CD226Q15762 336 aa8□□□□□ -1.13
APP-213ENST00000464867 TIGD2Q4W5G0 525 aa8□□□□□ -1.13
APP-213ENST00000464867 TSPO2Q5TGU0 170 aa8□□□□□ -1.13
APP-213ENST00000464867 FAM205BPQ63HN1 556 aa8□□□□□ -1.13
APP-213ENST00000464867 METTL2BQ6P1Q9 378 aaKnown RBP8□□□□□ -1.13
APP-213ENST00000464867 FIP1L1Q6UN15 594 aaKnown RBP8□□□□□ -1.13
APP-213ENST00000464867 CREG2Q8IUH2 290 aa8□□□□□ -1.13
APP-213ENST00000464867 TMCO5AQ8N6Q1 288 aa8□□□□□ -1.13
APP-213ENST00000464867 FAM169BQ8N8A8 192 aa8□□□□□ -1.13
APP-213ENST00000464867 NOA1Q8NC60 698 aaKnown RBP8□□□□□ -1.13
APP-213ENST00000464867 RFWD2Q8NHY2 731 aa8□□□□□ -1.13
APP-213ENST00000464867 GPR119Q8TDV5 335 aa8□□□□□ -1.13
APP-213ENST00000464867 SLC25A43Q8WUT9 341 aaPredicted RBP8□□□□□ -1.13
APP-213ENST00000464867 SELENOMQ8WWX9 145 aa8□□□□□ -1.13
APP-213ENST00000464867 LRRC39Q96DD0 335 aa8□□□□□ -1.13
APP-213ENST00000464867 ELP4Q96EB1 424 aa8□□□□□ -1.13
APP-213ENST00000464867 BOD1Q96IK1 185 aa8□□□□□ -1.13
APP-213ENST00000464867 ZNF317Q96PQ6 595 aaPredicted RBP8□□□□□ -1.13
APP-213ENST00000464867 DIRC2Q96SL1 478 aa8□□□□□ -1.13
APP-213ENST00000464867 ATOH8Q96SQ7 321 aa8□□□□□ -1.13
APP-213ENST00000464867 GATA5Q9BWX5 397 aaPredicted RBP8□□□□□ -1.13
APP-213ENST00000464867 BRF2Q9HAW0 419 aa8□□□□□ -1.13
APP-213ENST00000464867 C1RLQ9NZP8 487 aa8□□□□□ -1.13
APP-213ENST00000464867 CRNNQ9UBG3 495 aaPredicted RBP8□□□□□ -1.13
APP-213ENST00000464867 ZNF346Q9UL40 294 aaKnown RBP8□□□□□ -1.13
APP-213ENST00000464867 GRID1Q9ULK0 1009 aa8□□□□□ -1.13
APP-213ENST00000464867 CARD8Q9Y2G2 431 aa8□□□□□ -1.13
APP-213ENST00000464867 SPIN1Q9Y657 262 aaPredicted RBP8□□□□□ -1.13
APP-213ENST00000464867 A0A096LPK6 155 aa7.99□□□□□ -1.13
APP-213ENST00000464867 ARPC4-TTLL3A0A0A6YYG9 625 aa7.99□□□□□ -1.13
APP-213ENST00000464867 MYO1GB0I1T2 1018 aa7.99□□□□□ -1.13
APP-213ENST00000464867 CLDN25C9JDP6 229 aa7.99□□□□□ -1.13
APP-213ENST00000464867 DNPH1O43598 174 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms