RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 SMAD9O15198 467 aaKnown RBP12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 EEF1E1O43324 174 aaKnown RBP12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 EIF1BO60739 113 aaKnown RBP12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 CYTIPO60759 359 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 NPIPB7O75200 414 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 GMNNO75496 209 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 HSD17B1P14061 328 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 NCK1P16333 377 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 GGT1P19440 569 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 KLK2P20151 261 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 TNFRSF1BP20333 461 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 FPR1P21462 350 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 IDUAP35475 653 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 CPOXP36551 454 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 CDH12P55289 794 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 RASGEF1BQ0VAM2 473 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 CEACAM7Q14002 265 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 FBXL19-AS1Q494R0 122 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 SWT1Q5T5J6 900 aaKnown RBP12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 C1orf140Q5VVS0 124 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 HIST2H2BCQ6DN03 193 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 GLYATQ6IB77 296 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 VWA1Q6PCB0 445 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 CBLL1Q75N03 491 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 BTLAQ7Z6A9 289 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 FAM156AQ8NDB6 213 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 RBM15BQ8NDT2 890 aaKnown RBP12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 ADAMTS16Q8TE57 1224 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 FAM162AQ96A26 154 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 PCDHAC1Q9H158 963 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 GP6Q9HCN6 339 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 NPDC1Q9NQX5 325 aaPredicted RBP12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 KLHL9Q9P2J3 617 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 CD300AQ9UGN4 299 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 SETXQ7Z333 2677 aaKnown RBP12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 LIPT2A6NK58 231 aa12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 A8MXE2 369 aa12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 MSTNO14793 375 aa12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 SMNDC1O75940 238 aaKnown RBP eCLIP12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 ZNF682O95780 498 aa12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 SERPINA1P01009 418 aa12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 GPIP06744 558 aa12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 YES1P07947 543 aa12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 TCN1P20061 433 aaPredicted RBP12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 OR1E2P47887 323 aa12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 H3F3AP84243 136 aa12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 EGR4Q05215 589 aa12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 OR7A5Q15622 319 aa12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 SPATS1Q496A3 300 aa12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 TMEM201Q5SNT2 666 aa12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 RINLQ6ZS11 566 aa12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 LUZP2Q86TE4 346 aa12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 TUSC5Q8IXB3 177 aa12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 OR6K3Q8NGY3 331 aa12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 RNASE6Q93091 150 aaKnown RBP12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 NAA11Q9BSU3 229 aaPredicted RBP12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 TAPBPLQ9BX59 468 aa12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 PLSCR4Q9NRQ2 329 aa12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 KLHL13Q9P2N7 655 aa12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 FOXD3Q9UJU5 478 aaPredicted RBP12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 PROCRQ9UNN8 238 aa12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 CRYBG3Q68DQ2 2970 aa12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 CENPEQ02224 2701 aa12.94□□□□□ -0.34
SQSTM1-205ENST00000464493 TRAPPC13A5PLN9 417 aa12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 CHP2O43745 196 aa12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 AHSA1O95433 338 aa12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 CGAP01215 116 aa12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 CD8BP10966 210 aa12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 AGTR1P30556 359 aa12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 UQCRC1P31930 480 aa12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 RPS5P46782 204 aaKnown RBP12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 PDK3Q15120 406 aa12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 FXNQ16595 210 aa12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 PAQR6Q6TCH4 344 aa12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 C5orf46Q6UWT4 87 aa12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 DEF8Q6ZN54 512 aa12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 VTCN1Q7Z7D3 282 aa12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 TSPYL5Q86VY4 417 aaPredicted RBP12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 CCDC103Q8IW40 242 aa12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 MFSD8Q8NHS3 518 aa12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 KTI12Q96EK9 354 aaPredicted RBP12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 SPOCK3Q9BQ16 436 aa12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 PSD2Q9BQI7 771 aa12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 TACO1Q9BSH4 297 aaKnown RBP12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 RBM24Q9BX46 236 aaKnown RBP12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 POLR2J2Q9GZM3 115 aaKnown RBP12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 ENKD1Q9H0I2 346 aa12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 POLR2J3Q9H1A7 115 aaKnown RBP12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 OPN3Q9H1Y3 402 aaPredicted RBP12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 C1orf21Q9H246 121 aa12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 GORASP2Q9H8Y8 452 aa12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 BCO1Q9HAY6 547 aa12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 RPS6KA6Q9UK32 745 aa12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 ING1Q9UK53 422 aaPredicted RBP12.93□□□□□ -0.34
SQSTM1-205ENST00000464493 IGKV1D-42A0A075B6H8 117 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 TRAV36DV7A0A075B6V5 113 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 ZNF724A8MTY0 619 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 ZNF814B7Z6K7 855 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 OR2T1O43869 369 aa12.92□□□□□ -0.34
SQSTM1-205ENST00000464493 UBOX5O94941 541 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms