RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 EIF1BO60739 113 aaKnown RBP14.1□□□□□ -0.15
COL7A1-204ENST00000462475 ALDOCP09972 364 aaKnown RBP14.1□□□□□ -0.15
COL7A1-204ENST00000462475 BGNP21810 368 aa14.1□□□□□ -0.15
COL7A1-204ENST00000462475 RPS4Y1P22090 263 aaKnown RBP14.1□□□□□ -0.15
COL7A1-204ENST00000462475 S100A3P33764 101 aa14.1□□□□□ -0.15
COL7A1-204ENST00000462475 CDKN2CP42773 168 aa14.1□□□□□ -0.15
COL7A1-204ENST00000462475 SLC1A3P43003 542 aa14.1□□□□□ -0.15
COL7A1-204ENST00000462475 UFM1P61960 85 aa14.1□□□□□ -0.15
COL7A1-204ENST00000462475 VLDLRP98155 873 aa14.1□□□□□ -0.15
COL7A1-204ENST00000462475 LOXL1Q08397 574 aaPredicted RBP14.1□□□□□ -0.15
COL7A1-204ENST00000462475 KRT71Q3SY84 523 aa14.1□□□□□ -0.15
COL7A1-204ENST00000462475 MRPL2Q5T653 305 aaKnown RBP14.1□□□□□ -0.15
COL7A1-204ENST00000462475 CMIPQ8IY22 773 aa14.1□□□□□ -0.15
COL7A1-204ENST00000462475 DEPDC4Q8N2C3 294 aa14.1□□□□□ -0.15
COL7A1-204ENST00000462475 C17orf78Q8N4C9 275 aa14.1□□□□□ -0.15
COL7A1-204ENST00000462475 C1orf162Q8NEQ5 155 aaPredicted RBP14.1□□□□□ -0.15
COL7A1-204ENST00000462475 WDR60Q8WVS4 1066 aa14.1□□□□□ -0.15
COL7A1-204ENST00000462475 HAO1Q9UJM8 370 aa14.1□□□□□ -0.15
COL7A1-204ENST00000462475 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.1□□□□□ -0.15
COL7A1-204ENST00000462475 AMDHD2Q9Y303 409 aa14.1□□□□□ -0.15
COL7A1-204ENST00000462475 CFAP73A6NFT4 308 aa14.09□□□□□ -0.15
COL7A1-204ENST00000462475 CCDC154A6NI56 674 aa14.09□□□□□ -0.15
COL7A1-204ENST00000462475 ATP6V1G2-DDX39BF2Z307 99 aa14.09□□□□□ -0.15
COL7A1-204ENST00000462475 FAAHO00519 579 aa14.09□□□□□ -0.15
COL7A1-204ENST00000462475 LY6HO94772 140 aa14.09□□□□□ -0.15
COL7A1-204ENST00000462475 SLC25A16P16260 332 aa14.09□□□□□ -0.15
COL7A1-204ENST00000462475 IL12AP29459 219 aa14.09□□□□□ -0.15
COL7A1-204ENST00000462475 EPS8Q12929 822 aa14.09□□□□□ -0.15
COL7A1-204ENST00000462475 COX20Q5RI15 118 aa14.09□□□□□ -0.15
COL7A1-204ENST00000462475 PAQR6Q6TCH4 344 aa14.09□□□□□ -0.15
COL7A1-204ENST00000462475 LRRC74BQ6ZQY2 392 aa14.09□□□□□ -0.15
COL7A1-204ENST00000462475 ZIC4Q8N9L1 334 aa14.09□□□□□ -0.15
COL7A1-204ENST00000462475 PNPT1Q8TCS8 783 aaKnown RBP14.09□□□□□ -0.15
COL7A1-204ENST00000462475 C10orf105Q8TEF2 133 aa14.09□□□□□ -0.15
COL7A1-204ENST00000462475 NANOS1Q8WY41 292 aaKnown RBP14.09□□□□□ -0.15
COL7A1-204ENST00000462475 FAM168AQ92567 244 aa14.09□□□□□ -0.15
COL7A1-204ENST00000462475 PMM1Q92871 262 aa14.09□□□□□ -0.15
COL7A1-204ENST00000462475 ZNF385AQ96PM9 386 aaKnown RBP14.09□□□□□ -0.15
COL7A1-204ENST00000462475 PANX1Q96RD7 426 aa14.09□□□□□ -0.15
COL7A1-204ENST00000462475 NAA11Q9BSU3 229 aaPredicted RBP14.09□□□□□ -0.15
COL7A1-204ENST00000462475 MEAF6Q9HAF1 191 aa14.09□□□□□ -0.15
COL7A1-204ENST00000462475 PNPOQ9NVS9 261 aa14.09□□□□□ -0.15
COL7A1-204ENST00000462475 AIG1Q9NVV5 245 aa14.09□□□□□ -0.15
COL7A1-204ENST00000462475 PARPBPQ9NWS1 579 aa14.09□□□□□ -0.15
COL7A1-204ENST00000462475 RGS16O15492 202 aaPredicted RBP14.08□□□□□ -0.16
COL7A1-204ENST00000462475 GSNP06396 782 aa14.08□□□□□ -0.16
COL7A1-204ENST00000462475 FAM157CP0CG43 387 aa14.08□□□□□ -0.16
COL7A1-204ENST00000462475 MPGP29372 298 aa14.08□□□□□ -0.16
COL7A1-204ENST00000462475 MPP2Q14168 576 aa14.08□□□□□ -0.16
COL7A1-204ENST00000462475 MAPK11Q15759 364 aa14.08□□□□□ -0.16
COL7A1-204ENST00000462475 HIKESHIQ53FT3 197 aa14.08□□□□□ -0.16
COL7A1-204ENST00000462475 OTUD3Q5T2D3 398 aaPredicted RBP14.08□□□□□ -0.16
COL7A1-204ENST00000462475 OGFOD2Q6N063 350 aa14.08□□□□□ -0.16
COL7A1-204ENST00000462475 LRRC34Q8IZ02 419 aa14.08□□□□□ -0.16
COL7A1-204ENST00000462475 OR9K2Q8NGE7 335 aa14.08□□□□□ -0.16
COL7A1-204ENST00000462475 TMEM45BQ96B21 275 aa14.08□□□□□ -0.16
COL7A1-204ENST00000462475 FKRPQ9H9S5 495 aa14.08□□□□□ -0.16
COL7A1-204ENST00000462475 RLIMQ9NVW2 624 aa14.08□□□□□ -0.16
COL7A1-204ENST00000462475 LIPT2A6NK58 231 aa14.07□□□□□ -0.16
COL7A1-204ENST00000462475 SDHDO14521 159 aa14.07□□□□□ -0.16
COL7A1-204ENST00000462475 TM9SF1O15321 606 aa14.07□□□□□ -0.16
COL7A1-204ENST00000462475 SNUPNO95149 360 aaKnown RBP14.07□□□□□ -0.16
COL7A1-204ENST00000462475 AKR7A3O95154 331 aa14.07□□□□□ -0.16
COL7A1-204ENST00000462475 PGRP06401 933 aa14.07□□□□□ -0.16
COL7A1-204ENST00000462475 GKN3PP0CG01 181 aa14.07□□□□□ -0.16
COL7A1-204ENST00000462475 NR2F1P10589 423 aa14.07□□□□□ -0.16
COL7A1-204ENST00000462475 IL7RP16871 459 aa14.07□□□□□ -0.16
COL7A1-204ENST00000462475 ZNF16P17020 682 aaPredicted RBP14.07□□□□□ -0.16
COL7A1-204ENST00000462475 CDH2P19022 906 aaPredicted RBP14.07□□□□□ -0.16
COL7A1-204ENST00000462475 ANXA11P50995 505 aaKnown RBP14.07□□□□□ -0.16
COL7A1-204ENST00000462475 EFNA4P52798 201 aa14.07□□□□□ -0.16
COL7A1-204ENST00000462475 TGFBR3Q03167 851 aa14.07□□□□□ -0.16
COL7A1-204ENST00000462475 CEACAM7Q14002 265 aa14.07□□□□□ -0.16
COL7A1-204ENST00000462475 GNA13Q14344 377 aa14.07□□□□□ -0.16
COL7A1-204ENST00000462475 OR7A5Q15622 319 aa14.07□□□□□ -0.16
COL7A1-204ENST00000462475 ZNF836Q6ZNA1 936 aa14.07□□□□□ -0.16
COL7A1-204ENST00000462475 ZNF621Q6ZSS3 439 aa14.07□□□□□ -0.16
COL7A1-204ENST00000462475 TRIML2Q8N7C3 387 aa14.07□□□□□ -0.16
COL7A1-204ENST00000462475 TMEM99Q8N816 258 aa14.07□□□□□ -0.16
COL7A1-204ENST00000462475 ZBTB9Q96C00 473 aa14.07□□□□□ -0.16
COL7A1-204ENST00000462475 OR52E6Q96RD3 313 aa14.07□□□□□ -0.16
COL7A1-204ENST00000462475 ADAM19Q9H013 955 aa14.07□□□□□ -0.16
COL7A1-204ENST00000462475 MTHFD2LQ9H903 347 aaPredicted RBP14.07□□□□□ -0.16
COL7A1-204ENST00000462475 SSU72Q9NP77 194 aaKnown RBP14.07□□□□□ -0.16
COL7A1-204ENST00000462475 CDC42EP3Q9UKI2 254 aa14.07□□□□□ -0.16
COL7A1-204ENST00000462475 MOKQ9UQ07 419 aa14.07□□□□□ -0.16
COL7A1-204ENST00000462475 AQP7P3A6NL99 342 aa14.06□□□□□ -0.16
COL7A1-204ENST00000462475 KLF11O14901 512 aa14.06□□□□□ -0.16
COL7A1-204ENST00000462475 PHF1O43189 567 aaPredicted RBP14.06□□□□□ -0.16
COL7A1-204ENST00000462475 GPIP06744 558 aa14.06□□□□□ -0.16
COL7A1-204ENST00000462475 DBIP07108 87 aaKnown RBP14.06□□□□□ -0.16
COL7A1-204ENST00000462475 IGHV4-31P0DP07 118 aa14.06□□□□□ -0.16
COL7A1-204ENST00000462475 UQCRBP14927 111 aa14.06□□□□□ -0.16
COL7A1-204ENST00000462475 APOBEC3AP31941 199 aaPredicted RBP14.06□□□□□ -0.16
COL7A1-204ENST00000462475 MAP2K6P52564 334 aa14.06□□□□□ -0.16
COL7A1-204ENST00000462475 PRPS1P60891 318 aa14.06□□□□□ -0.16
COL7A1-204ENST00000462475 TXNL4AP83876 142 aaKnown RBP14.06□□□□□ -0.16
COL7A1-204ENST00000462475 CHRNB3Q05901 458 aa14.06□□□□□ -0.16
COL7A1-204ENST00000462475 LGALS3BPQ08380 585 aa14.06□□□□□ -0.16
COL7A1-204ENST00000462475 BST1Q10588 318 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms