RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 OR4Q3Q8NH05 313 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 HS6ST2Q96MM7 605 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 IRGMA1A4Y4 181 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 PRICKLE3O43900 615 aaPredicted RBP14.23□□□□□ -0.13
LMNB1-203ENST00000460265 HLA-DPB1P04440 258 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 POU2F2P09086 479 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 CLUP10909 449 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 MYF5P13349 255 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 FRKP42685 505 aaPredicted RBP14.23□□□□□ -0.13
LMNB1-203ENST00000460265 LIMK1P53667 647 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 HCCSP53701 268 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 KCNAB1Q14722 419 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 ZNF169Q14929 603 aaPredicted RBP14.23□□□□□ -0.13
LMNB1-203ENST00000460265 ODF4Q2M2E3 257 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 ZNF600Q6ZNG1 722 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 SDR9C7Q8NEX9 313 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 AP3S1Q92572 193 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 FBRSQ9HAH7 460 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 GLS2Q9UI32 602 aa14.23□□□□□ -0.13
LMNB1-203ENST00000460265 PLXNA2O75051 1894 aa14.22□□□□□ -0.13
LMNB1-203ENST00000460265 C1orf189Q5VU69 101 aa14.22□□□□□ -0.13
LMNB1-203ENST00000460265 GDPGP1Q6ZNW5 385 aa14.22□□□□□ -0.13
LMNB1-203ENST00000460265 MBOAT2Q6ZWT7 520 aa14.22□□□□□ -0.13
LMNB1-203ENST00000460265 BAHD1Q8TBE0 780 aaPredicted RBP14.22□□□□□ -0.13
LMNB1-203ENST00000460265 DIO2Q92813 273 aa14.22□□□□□ -0.13
LMNB1-203ENST00000460265 SLC25A46Q96AG3 418 aa14.22□□□□□ -0.13
LMNB1-203ENST00000460265 RBP7Q96R05 134 aa14.22□□□□□ -0.13
LMNB1-203ENST00000460265 KIAA1671Q9BY89 1806 aa14.22□□□□□ -0.13
LMNB1-203ENST00000460265 C8orf33Q9H7E9 229 aaPredicted RBP14.22□□□□□ -0.13
LMNB1-203ENST00000460265 EXOSC1Q9Y3B2 195 aaKnown RBP14.22□□□□□ -0.13
LMNB1-203ENST00000460265 SLCO1B1Q9Y6L6 691 aa14.22□□□□□ -0.13
LMNB1-203ENST00000460265 CDH10Q9Y6N8 788 aa14.22□□□□□ -0.13
LMNB1-203ENST00000460265 REV3LO60673 3130 aa14.22□□□□□ -0.13
LMNB1-203ENST00000460265 HRKO00198 91 aa14.22□□□□□ -0.13
LMNB1-203ENST00000460265 SYT5O00445 386 aa14.22□□□□□ -0.13
LMNB1-203ENST00000460265 RPP14O95059 124 aaKnown RBP14.22□□□□□ -0.13
LMNB1-203ENST00000460265 OR5F1O95221 314 aa14.22□□□□□ -0.13
LMNB1-203ENST00000460265 HAAOP46952 286 aa14.22□□□□□ -0.13
LMNB1-203ENST00000460265 YPEL5P62699 121 aa14.22□□□□□ -0.13
LMNB1-203ENST00000460265 OCLNQ16625 522 aa14.22□□□□□ -0.13
LMNB1-203ENST00000460265 FAM209BQ5JX69 171 aa14.22□□□□□ -0.13
LMNB1-203ENST00000460265 PRAMEF17Q5VTA0 474 aa14.22□□□□□ -0.13
LMNB1-203ENST00000460265 PIAS4Q8N2W9 510 aaPredicted RBP14.22□□□□□ -0.13
LMNB1-203ENST00000460265 POT1Q9NUX5 634 aa14.22□□□□□ -0.13
LMNB1-203ENST00000460265 MLXQ9UH92 298 aa14.22□□□□□ -0.13
LMNB1-203ENST00000460265 ENTPD2Q9Y5L3 495 aa14.22□□□□□ -0.13
LMNB1-203ENST00000460265 SPEGQ15772 3267 aa14.22□□□□□ -0.13
LMNB1-203ENST00000460265 H0YC42 278 aa14.21□□□□□ -0.13
LMNB1-203ENST00000460265 IL20RBQ6UXL0 311 aa14.21□□□□□ -0.13
LMNB1-203ENST00000460265 GPR135Q8IZ08 494 aa14.21□□□□□ -0.13
LMNB1-203ENST00000460265 ZNF671Q8TAW3 534 aa14.21□□□□□ -0.13
LMNB1-203ENST00000460265 THAP3Q8WTV1 239 aaPredicted RBP14.21□□□□□ -0.13
LMNB1-203ENST00000460265 TM9SF4Q92544 642 aa14.21□□□□□ -0.13
LMNB1-203ENST00000460265 NXPE2Q96DL1 559 aa14.21□□□□□ -0.13
LMNB1-203ENST00000460265 ZFP3Q96NJ6 502 aa14.21□□□□□ -0.13
LMNB1-203ENST00000460265 HEXA-AS1Q9H8Q6 139 aa14.21□□□□□ -0.13
LMNB1-203ENST00000460265 MMP17Q9ULZ9 603 aa14.21□□□□□ -0.13
LMNB1-203ENST00000460265 C19orf53Q9UNZ5 99 aaPredicted RBP14.21□□□□□ -0.13
LMNB1-203ENST00000460265 SDK2Q58EX2 2172 aa14.21□□□□□ -0.13
LMNB1-203ENST00000460265 POM121CA8CG34 1229 aa14.21□□□□□ -0.13
LMNB1-203ENST00000460265 MPC2O95563 127 aa14.21□□□□□ -0.13
LMNB1-203ENST00000460265 HLA-DQA2P01906 255 aa14.21□□□□□ -0.13
LMNB1-203ENST00000460265 TSFMP43897 325 aaKnown RBP14.21□□□□□ -0.13
LMNB1-203ENST00000460265 COL19A1Q14993 1142 aa14.21□□□□□ -0.13
LMNB1-203ENST00000460265 SF3A2Q15428 464 aaKnown RBP14.21□□□□□ -0.13
LMNB1-203ENST00000460265 LGALSLQ3ZCW2 172 aaPredicted RBP14.21□□□□□ -0.13
LMNB1-203ENST00000460265 ALG8Q9BVK2 526 aa14.21□□□□□ -0.13
LMNB1-203ENST00000460265 ENKD1Q9H0I2 346 aa14.21□□□□□ -0.13
LMNB1-203ENST00000460265 SLC25A19Q9HC21 320 aa14.21□□□□□ -0.13
LMNB1-203ENST00000460265 WSB2Q9NYS7 404 aaPredicted RBP14.21□□□□□ -0.13
LMNB1-203ENST00000460265 DHCR7Q9UBM7 475 aaKnown RBP14.21□□□□□ -0.13
LMNB1-203ENST00000460265 PFDN2Q9UHV9 154 aa14.21□□□□□ -0.13
LMNB1-203ENST00000460265 TRAV20A0A0B4J274 112 aa14.21□□□□□ -0.14
LMNB1-203ENST00000460265 KIR2DS5A0A0G2JLQ3 304 aa14.21□□□□□ -0.14
LMNB1-203ENST00000460265 A0A0G2JNG1 304 aa14.21□□□□□ -0.14
LMNB1-203ENST00000460265 ARRDC5A6NEK1 342 aa14.21□□□□□ -0.14
LMNB1-203ENST00000460265 KIR2DS3K7RE56 304 aa14.21□□□□□ -0.14
LMNB1-203ENST00000460265 HRO43593 1189 aa14.21□□□□□ -0.14
LMNB1-203ENST00000460265 GALR3O60755 368 aaPredicted RBP14.21□□□□□ -0.14
LMNB1-203ENST00000460265 HPGDSO60760 199 aa14.21□□□□□ -0.14
LMNB1-203ENST00000460265 KDM4BO94953 1096 aa14.21□□□□□ -0.14
LMNB1-203ENST00000460265 IFNGP01579 166 aa14.21□□□□□ -0.14
LMNB1-203ENST00000460265 ZNF3P17036 446 aa14.21□□□□□ -0.14
LMNB1-203ENST00000460265 CRYBB2P43320 205 aa14.21□□□□□ -0.14
LMNB1-203ENST00000460265 CSNK1EP49674 416 aaKnown RBP14.21□□□□□ -0.14
LMNB1-203ENST00000460265 GDI2P50395 445 aaKnown RBP14.21□□□□□ -0.14
LMNB1-203ENST00000460265 KIR2DS5Q14953 304 aa14.21□□□□□ -0.14
LMNB1-203ENST00000460265 RPTNQ6XPR3 784 aa14.21□□□□□ -0.14
LMNB1-203ENST00000460265 APOBEC4Q8WW27 367 aaKnown RBP14.21□□□□□ -0.14
LMNB1-203ENST00000460265 SHARPINQ9H0F6 387 aa14.21□□□□□ -0.14
LMNB1-203ENST00000460265 ISG20L2Q9H9L3 353 aaKnown RBP14.21□□□□□ -0.14
LMNB1-203ENST00000460265 ZFP64Q9NPA5 681 aa14.21□□□□□ -0.14
LMNB1-203ENST00000460265 FBXL4Q9UKA2 621 aa14.21□□□□□ -0.14
LMNB1-203ENST00000460265 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 WDPCPO95876 746 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 MAKP20794 623 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 AHCYP23526 432 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 FLI1Q01543 452 aaPredicted RBP14.2□□□□□ -0.14
LMNB1-203ENST00000460265 CRMP1Q14194 572 aa14.2□□□□□ -0.14
LMNB1-203ENST00000460265 ZSWIM7Q19AV6 140 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms