RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 CAPRIN1Q14444 709 aaKnown RBP16.71■□□□□ 0.27
COL5A1-203ENST00000460264 ZNF311Q5JNZ3 666 aa16.71■□□□□ 0.27
COL5A1-203ENST00000460264 Q5PR19 223 aa16.71■□□□□ 0.27
COL5A1-203ENST00000460264 NCMAPQ5T1S8 102 aa16.71■□□□□ 0.27
COL5A1-203ENST00000460264 GCNT6Q5T4J0 391 aa16.71■□□□□ 0.27
COL5A1-203ENST00000460264 FBXW9Q5XUX1 488 aa16.71■□□□□ 0.27
COL5A1-203ENST00000460264 PAQR6Q6TCH4 344 aa16.71■□□□□ 0.27
COL5A1-203ENST00000460264 ATG4DQ86TL0 474 aaPredicted RBP16.71■□□□□ 0.27
COL5A1-203ENST00000460264 C10orf111Q8N326 155 aa16.71■□□□□ 0.27
COL5A1-203ENST00000460264 NAA11Q9BSU3 229 aaPredicted RBP16.71■□□□□ 0.27
COL5A1-203ENST00000460264 MALT1Q9UDY8 824 aa16.71■□□□□ 0.27
COL5A1-203ENST00000460264 RNF115Q9Y4L5 304 aa16.71■□□□□ 0.27
COL5A1-203ENST00000460264 LIPT2A6NK58 231 aa16.7■□□□□ 0.26
COL5A1-203ENST00000460264 ARHGEF9O43307 516 aa16.7■□□□□ 0.26
COL5A1-203ENST00000460264 SASH3O75995 380 aa16.7■□□□□ 0.26
COL5A1-203ENST00000460264 GPIP06744 558 aa16.7■□□□□ 0.26
COL5A1-203ENST00000460264 ETS2P15036 469 aa16.7■□□□□ 0.26
COL5A1-203ENST00000460264 NCF2P19878 526 aaPredicted RBP16.7■□□□□ 0.26
COL5A1-203ENST00000460264 SLC17A1Q14916 467 aa16.7■□□□□ 0.26
COL5A1-203ENST00000460264 STK11Q15831 433 aa16.7■□□□□ 0.26
COL5A1-203ENST00000460264 P3H2Q8IVL5 708 aa16.7■□□□□ 0.26
COL5A1-203ENST00000460264 UBE2J2Q8N2K1 259 aa16.7■□□□□ 0.26
COL5A1-203ENST00000460264 ZNF433Q8N7K0 673 aaPredicted RBP16.7■□□□□ 0.26
COL5A1-203ENST00000460264 ZNF611Q8N823 705 aa16.7■□□□□ 0.26
COL5A1-203ENST00000460264 NFKBIDQ8NI38 313 aa16.7■□□□□ 0.26
COL5A1-203ENST00000460264 SLC35B4Q969S0 331 aa16.7■□□□□ 0.26
COL5A1-203ENST00000460264 C3orf49Q96BT1 292 aa16.7■□□□□ 0.26
COL5A1-203ENST00000460264 THOC1Q96FV9 657 aaKnown RBP16.7■□□□□ 0.26
COL5A1-203ENST00000460264 IKZF5Q9H5V7 419 aa16.7■□□□□ 0.26
COL5A1-203ENST00000460264 ESRP2Q9H6T0 727 aaKnown RBP16.7■□□□□ 0.26
COL5A1-203ENST00000460264 FLVCR1Q9Y5Y0 555 aa16.7■□□□□ 0.26
COL5A1-203ENST00000460264 NIPBLQ6KC79 2804 aaeCLIP16.69■□□□□ 0.26
COL5A1-203ENST00000460264 A0A1W2PP18 115 aa16.69■□□□□ 0.26
COL5A1-203ENST00000460264 FRS3O43559 492 aa16.69■□□□□ 0.26
COL5A1-203ENST00000460264 MRPL33O75394 65 aaKnown RBP16.69■□□□□ 0.26
COL5A1-203ENST00000460264 CD3EP07766 207 aa16.69■□□□□ 0.26
COL5A1-203ENST00000460264 GGT1P19440 569 aa16.69■□□□□ 0.26
COL5A1-203ENST00000460264 BSPH1Q075Z2 132 aa16.69■□□□□ 0.26
COL5A1-203ENST00000460264 BNIP2Q12982 314 aa16.69■□□□□ 0.26
COL5A1-203ENST00000460264 CEACAM7Q14002 265 aa16.69■□□□□ 0.26
COL5A1-203ENST00000460264 PPA1Q15181 289 aa16.69■□□□□ 0.26
COL5A1-203ENST00000460264 OR7A5Q15622 319 aa16.69■□□□□ 0.26
COL5A1-203ENST00000460264 TIMM23BQ5SRD1 257 aa16.69■□□□□ 0.26
COL5A1-203ENST00000460264 OTUD3Q5T2D3 398 aaPredicted RBP16.69■□□□□ 0.26
COL5A1-203ENST00000460264 ADAM5Q6NVV9 412 aa16.69■□□□□ 0.26
COL5A1-203ENST00000460264 CASP12Q6UXS9 341 aa16.69■□□□□ 0.26
COL5A1-203ENST00000460264 P2RY8Q86VZ1 359 aa16.69■□□□□ 0.26
COL5A1-203ENST00000460264 LILRB1Q8NHL6 650 aaPredicted RBP16.69■□□□□ 0.26
COL5A1-203ENST00000460264 AKAP1Q92667 903 aaKnown RBP eCLIP16.69■□□□□ 0.26
COL5A1-203ENST00000460264 PERPQ96FX8 193 aa16.69■□□□□ 0.26
COL5A1-203ENST00000460264 RSPO3Q9BXY4 272 aaPredicted RBP16.69■□□□□ 0.26
COL5A1-203ENST00000460264 RABEP2Q9H5N1 569 aa16.69■□□□□ 0.26
COL5A1-203ENST00000460264 ZNF385DQ9H6B1 395 aa16.69■□□□□ 0.26
COL5A1-203ENST00000460264 SLC9A8Q9Y2E8 581 aa16.69■□□□□ 0.26
COL5A1-203ENST00000460264 USF3Q68DE3 2245 aa16.68■□□□□ 0.26
COL5A1-203ENST00000460264 OR5H1A6NKK0 313 aa16.68■□□□□ 0.26
COL5A1-203ENST00000460264 A8MVM7 634 aa16.68■□□□□ 0.26
COL5A1-203ENST00000460264 TMEM229AB2RXF0 380 aa16.68■□□□□ 0.26
COL5A1-203ENST00000460264 CLOCKO15516 846 aa16.68■□□□□ 0.26
COL5A1-203ENST00000460264 RAD51DO75771 328 aa16.68■□□□□ 0.26
COL5A1-203ENST00000460264 AKR7A3O95154 331 aa16.68■□□□□ 0.26
COL5A1-203ENST00000460264 PRKAR1BP31321 381 aa16.68■□□□□ 0.26
COL5A1-203ENST00000460264 HOXC5Q00444 222 aa16.68■□□□□ 0.26
COL5A1-203ENST00000460264 CDK6Q00534 326 aa16.68■□□□□ 0.26
COL5A1-203ENST00000460264 REEP3Q6NUK4 255 aa16.68■□□□□ 0.26
COL5A1-203ENST00000460264 DLEU7Q6UYE1 221 aa16.68■□□□□ 0.26
COL5A1-203ENST00000460264 TMEM99Q8N816 258 aa16.68■□□□□ 0.26
COL5A1-203ENST00000460264 MUCL1Q96DR8 90 aa16.68■□□□□ 0.26
COL5A1-203ENST00000460264 CPPED1Q9BRF8 314 aaPredicted RBP16.68■□□□□ 0.26
COL5A1-203ENST00000460264 GSX2Q9BZM3 304 aa16.68■□□□□ 0.26
COL5A1-203ENST00000460264 NPHS2Q9NP85 383 aa16.68■□□□□ 0.26
COL5A1-203ENST00000460264 ASB6Q9NWX5 421 aa16.68■□□□□ 0.26
COL5A1-203ENST00000460264 TAS2R16Q9NYV7 291 aa16.68■□□□□ 0.26
COL5A1-203ENST00000460264 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.68■□□□□ 0.26
COL5A1-203ENST00000460264 DCTN4Q9UJW0 460 aa16.68■□□□□ 0.26
COL5A1-203ENST00000460264 CORO2BQ9UQ03 480 aa16.68■□□□□ 0.26
COL5A1-203ENST00000460264 ZFHX3Q15911 3703 aa16.67■□□□□ 0.26
COL5A1-203ENST00000460264 DPRXA6NFQ7 191 aa16.67■□□□□ 0.26
COL5A1-203ENST00000460264 AQP7P3A6NL99 342 aa16.67■□□□□ 0.26
COL5A1-203ENST00000460264 EDF1O60869 148 aaKnown RBP16.67■□□□□ 0.26
COL5A1-203ENST00000460264 NPIPB7O75200 414 aa16.67■□□□□ 0.26
COL5A1-203ENST00000460264 GPX2P18283 190 aa16.67■□□□□ 0.26
COL5A1-203ENST00000460264 PTH2RP49190 550 aa16.67■□□□□ 0.26
COL5A1-203ENST00000460264 FOXG1P55316 489 aaPredicted RBP16.67■□□□□ 0.26
COL5A1-203ENST00000460264 FAPQ12884 760 aa16.67■□□□□ 0.26
COL5A1-203ENST00000460264 C1orf140Q5VVS0 124 aa16.67■□□□□ 0.26
COL5A1-203ENST00000460264 PRSS57Q6UWY2 283 aa16.67■□□□□ 0.26
COL5A1-203ENST00000460264 SSX8Q7RTT4 187 aa16.67■□□□□ 0.26
COL5A1-203ENST00000460264 COMTD1Q86VU5 262 aa16.67■□□□□ 0.26
COL5A1-203ENST00000460264 KRT73Q86Y46 540 aa16.67■□□□□ 0.26
COL5A1-203ENST00000460264 OR9K2Q8NGE7 335 aa16.67■□□□□ 0.26
COL5A1-203ENST00000460264 TMEM171Q8WVE6 324 aa16.67■□□□□ 0.26
COL5A1-203ENST00000460264 GSX1Q9H4S2 264 aaPredicted RBP16.67■□□□□ 0.26
COL5A1-203ENST00000460264 TMEM38AQ9H6F2 299 aa16.67■□□□□ 0.26
COL5A1-203ENST00000460264 PARPBPQ9NWS1 579 aa16.67■□□□□ 0.26
COL5A1-203ENST00000460264 ADPRHL2Q9NX46 363 aa16.67■□□□□ 0.26
COL5A1-203ENST00000460264 NPAP1Q9NZP6 1156 aa16.67■□□□□ 0.26
COL5A1-203ENST00000460264 CIB4A0PJX0 185 aa16.66■□□□□ 0.26
COL5A1-203ENST00000460264 PDLIM1O00151 329 aa16.66■□□□□ 0.26
COL5A1-203ENST00000460264 TMCC2O75069 709 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms