RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 LRRC28Q86X40 367 aaPredicted RBP16.63■□□□□ 0.25
HPS3-202ENST00000460120 DACT3Q96B18 629 aaPredicted RBP16.63■□□□□ 0.25
HPS3-202ENST00000460120 KLHDC7BQ96G42 594 aa16.63■□□□□ 0.25
HPS3-202ENST00000460120 RNF170Q96K19 258 aa16.63■□□□□ 0.25
HPS3-202ENST00000460120 SNX18Q96RF0 628 aa16.63■□□□□ 0.25
HPS3-202ENST00000460120 BEX1Q9HBH7 125 aa16.63■□□□□ 0.25
HPS3-202ENST00000460120 CYSLTR2Q9NS75 346 aa16.63■□□□□ 0.25
HPS3-202ENST00000460120 CHRNA9Q9UGM1 479 aa16.63■□□□□ 0.25
HPS3-202ENST00000460120 OR6C68A6NDL8 312 aa16.63■□□□□ 0.25
HPS3-202ENST00000460120 F13BP05160 661 aa16.63■□□□□ 0.25
HPS3-202ENST00000460120 ARSBP15848 533 aa16.63■□□□□ 0.25
HPS3-202ENST00000460120 ATF1P18846 271 aa16.63■□□□□ 0.25
HPS3-202ENST00000460120 RPS27P42677 84 aaKnown RBP16.63■□□□□ 0.25
HPS3-202ENST00000460120 METAP1DQ6UB28 335 aaPredicted RBP16.63■□□□□ 0.25
HPS3-202ENST00000460120 CBLN3Q6UW01 205 aa16.63■□□□□ 0.25
HPS3-202ENST00000460120 ZNF433Q8N7K0 673 aaPredicted RBP16.63■□□□□ 0.25
HPS3-202ENST00000460120 ZNF511Q8NB15 262 aa16.63■□□□□ 0.25
HPS3-202ENST00000460120 LMX1AQ8TE12 382 aa16.63■□□□□ 0.25
HPS3-202ENST00000460120 LMF2Q9BU23 707 aaKnown RBP16.63■□□□□ 0.25
HPS3-202ENST00000460120 SPRTNQ9H040 489 aaPredicted RBP16.63■□□□□ 0.25
HPS3-202ENST00000460120 ST6GALNAC2Q9UJ37 374 aa16.63■□□□□ 0.25
HPS3-202ENST00000460120 ACOD1A6NK06 481 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 HLA-DQB1P01920 261 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 HPGDP15428 266 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 AQP2P41181 271 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 MLLT3P42568 568 aaPredicted RBP16.62■□□□□ 0.25
HPS3-202ENST00000460120 FGFBP1Q14512 234 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 PON3Q15166 354 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 CD226Q15762 336 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 DMKNQ6E0U4 476 aaPredicted RBP16.62■□□□□ 0.25
HPS3-202ENST00000460120 TRILQ7L0X0 811 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 PHOSPHO1Q8TCT1 267 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 PHF21AQ96BD5 680 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 RPRD1BQ9NQG5 326 aaKnown RBP16.62■□□□□ 0.25
HPS3-202ENST00000460120 ITGB1BP2Q9UKP3 347 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 TEX13CA0A0J9YWL9 993 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 FAM172BPA6NC97 362 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 AKR7A2O43488 359 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 YES1P07947 543 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 FAM157BP0CG42 384 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 HOXD11P31277 338 aaPredicted RBP16.62■□□□□ 0.25
HPS3-202ENST00000460120 ATP12AP54707 1039 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 CLDN12P56749 244 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 NRG3P56975 720 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 EFR3AQ14156 821 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 ODF4Q2M2E3 257 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 BMPERQ8N8U9 685 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.62■□□□□ 0.25
HPS3-202ENST00000460120 ACOT12Q8WYK0 555 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 Q96M85 177 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 DERL3Q96Q80 235 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 SLC38A3Q99624 504 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 KCNJ15Q99712 375 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 NRSN2Q9GZP1 204 aa16.62■□□□□ 0.25
HPS3-202ENST00000460120 MRPS33Q9Y291 106 aaKnown RBP16.62■□□□□ 0.25
HPS3-202ENST00000460120 SERINC4A6NH21 518 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 CLDN4O14493 209 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 ORC5O43913 435 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 CTNSO60931 367 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 SYPP08247 313 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 CFL1P23528 166 aaKnown RBP16.61■□□□□ 0.25
HPS3-202ENST00000460120 OR1D4P47884 311 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 GBX2P52951 348 aaPredicted RBP16.61■□□□□ 0.25
HPS3-202ENST00000460120 CLDN20P56880 219 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 DGCR2P98153 550 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 MANEAQ5SRI9 462 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 HES5Q5TA89 166 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 THOC7Q6I9Y2 204 aaKnown RBP16.61■□□□□ 0.25
HPS3-202ENST00000460120 LEG1Q6P5S2 330 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 MED25Q71SY5 747 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 ZNF550Q7Z398 422 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.61■□□□□ 0.25
HPS3-202ENST00000460120 ZNF671Q8TAW3 534 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 GAL3ST4Q96RP7 486 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 ZNF426Q9BUY5 554 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 OR8D2Q9GZM6 311 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 NUDT15Q9NV35 164 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 FBXL21Q9UKT6 434 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 NOX1Q9Y5S8 564 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 ALPK2Q86TB3 2170 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 OR5K4A6NMS3 321 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 PRAMEF2O60811 474 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 TSC22D2O75157 780 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 CCINQ13939 588 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 DEFB133Q30KQ1 61 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 SERPINA12Q8IW75 414 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 OR51Q1Q8NH59 317 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 HSD17B8Q92506 261 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 ZNF524Q96C55 264 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 FOXN4Q96NZ1 517 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 ELF4Q99607 663 aaPredicted RBP16.61■□□□□ 0.25
HPS3-202ENST00000460120 TWSG1Q9GZX9 223 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 INPP5EQ9NRR6 644 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 GPR3P46089 330 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 ACTC1P68032 377 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 ACTA1P68133 377 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 MOGAT1Q96PD6 335 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 SRA1Q9HD15 236 aaKnown RBP16.61■□□□□ 0.25
HPS3-202ENST00000460120 PRDM9Q9NQV7 894 aa16.61■□□□□ 0.25
HPS3-202ENST00000460120 POLE3Q9NRF9 147 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms