RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 ZNF41P51814 821 aaPredicted RBP8.14□□□□□ -1.11
VPS50-207ENST00000458530 MAP2K6P52564 334 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 MLF1P58340 268 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 CDK5Q00535 292 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 MVKQ03426 396 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 CRYZQ08257 329 aaKnown RBP8.14□□□□□ -1.11
VPS50-207ENST00000458530 GINS1Q14691 196 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 CTU2Q2VPK5 515 aaKnown RBP8.14□□□□□ -1.11
VPS50-207ENST00000458530 NDUFAF6Q330K2 333 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 SMARCD3Q6STE5 483 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 APOOLQ6UXV4 268 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 LINC00114Q6XXX2 140 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 GRINAQ7Z429 371 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 ATG4DQ86TL0 474 aaPredicted RBP8.14□□□□□ -1.11
VPS50-207ENST00000458530 OAFQ86UD1 273 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 TMEM156Q8N614 296 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 BPIFB6Q8NFQ5 453 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 OR5M3Q8NGP4 307 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 RHOXF1Q8NHV9 184 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 CNIH3Q8TBE1 160 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 RNF138Q8WVD3 245 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 SGCZQ96LD1 299 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 FER1L6-AS2Q96M78 137 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 NODALQ96S42 347 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 TSSK6Q9BXA6 273 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 POLDIP3Q9BY77 421 aaKnown RBP8.14□□□□□ -1.11
VPS50-207ENST00000458530 PTGES2Q9H7Z7 377 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 GPN2Q9H9Y4 310 aaPredicted RBP8.14□□□□□ -1.11
VPS50-207ENST00000458530 RASSF1Q9NS23 344 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 HPF1Q9NWY4 346 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 P4HTMQ9NXG6 502 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 CNOT2Q9NZN8 540 aaKnown RBP8.14□□□□□ -1.11
VPS50-207ENST00000458530 ZNF337Q9Y3M9 751 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 PCDHGB5Q9Y5G0 923 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 WIF1Q9Y5W5 379 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 SPIN1Q9Y657 262 aaPredicted RBP8.14□□□□□ -1.11
VPS50-207ENST00000458530 CENPEQ02224 2701 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 DOCK10Q96BY6 2186 aa8.14□□□□□ -1.11
VPS50-207ENST00000458530 EML6Q6ZMW3 1958 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 SPENQ96T58 3664 aaKnown RBP8.13□□□□□ -1.11
VPS50-207ENST00000458530 IGLV3-32A0A0A0MS00 114 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 A6NHS1 94 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 RGS10O43665 173 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 SMNDC1O75940 238 aaKnown RBP eCLIP8.13□□□□□ -1.11
VPS50-207ENST00000458530 OR7A10O76100 309 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 IFNGP01579 166 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 HIST1H2ABP04908 130 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 LIPCP11150 499 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 FUT4P22083 530 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 FKBP2P26885 142 aaKnown RBP8.13□□□□□ -1.11
VPS50-207ENST00000458530 EPHA2P29317 976 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 TACR3P29371 465 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 FMO3P31513 532 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 SOX3P41225 446 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 RRADP55042 308 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 PRPS1P60891 318 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 RPS18P62269 152 aaKnown RBP8.13□□□□□ -1.11
VPS50-207ENST00000458530 AIMP2Q13155 320 aaKnown RBP8.13□□□□□ -1.11
VPS50-207ENST00000458530 SRSF6Q13247 344 aaKnown RBP8.13□□□□□ -1.11
VPS50-207ENST00000458530 MFSD13AQ14CX5 517 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 QPRTQ15274 297 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 SNAPC1Q16533 368 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 OCLNQ16625 522 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 TBR1Q16650 682 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.13□□□□□ -1.11
VPS50-207ENST00000458530 PGGHGQ32M88 737 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 ZNF791Q3KP31 576 aaPredicted RBP8.13□□□□□ -1.11
VPS50-207ENST00000458530 ZBED5Q49AG3 693 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 TMEM201Q5SNT2 666 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 SLC25A30Q5SVS4 291 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 ARHGAP11AQ6P4F7 1023 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 CBLN3Q6UW01 205 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 WDR88Q6ZMY6 472 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 RTL4Q6ZR62 310 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 HIST3H2AQ7L7L0 130 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 FAM26EQ8N5C1 309 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 ZNF540Q8NDQ6 660 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 OR4K17Q8NGC6 315 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 PFN4Q8NHR9 129 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 DUSP19Q8WTR2 217 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 FCGR1BQ92637 280 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 HIST1H2ACQ93077 130 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 RFKQ969G6 155 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 TUBA1CQ9BQE3 449 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 ADAM19Q9H013 955 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 SLC25A18Q9H1K4 315 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 OR52D1Q9H346 318 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 FN3KQ9H479 309 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 CDCP1Q9H5V8 836 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 LIN28AQ9H9Z2 209 aaKnown RBP8.13□□□□□ -1.11
VPS50-207ENST00000458530 TVP23BQ9NYZ1 205 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 RPL36Q9Y3U8 105 aaKnown RBP8.13□□□□□ -1.11
VPS50-207ENST00000458530 DOPEY1Q5JWR5 2465 aa8.13□□□□□ -1.11
VPS50-207ENST00000458530 PCNX3Q9H6A9 2034 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 TRAV36DV7A0A075B6V5 113 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 A0A087WZY1 265 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 RIIAD1A6NNX1 92 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 OIP5O43482 229 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 OR2T1O43869 369 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 NOL3O60936 208 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms