RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 OR4A16Q8NH70 328 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 COQ8AQ8NI60 647 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 NAT14Q8WUY8 206 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 TMEM203Q969S6 136 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 C18orf25Q96B23 403 aaPredicted RBP4.94□□□□□ -1.62
VPS41-209ENST00000457055 ANKRD9Q96BM1 317 aaPredicted RBP4.94□□□□□ -1.62
VPS41-209ENST00000457055 OR2V2Q96R30 315 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 CLSTN3Q9BQT9 956 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 TTYH2Q9BSA4 534 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 RSG1Q9BU20 258 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 PTDSS2Q9BVG9 487 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 MRPS26Q9BYN8 205 aaKnown RBP4.94□□□□□ -1.62
VPS41-209ENST00000457055 PORCNQ9H237 461 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 TUBB1Q9H4B7 451 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 GAREM1Q9H706 876 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 PPP1R3EQ9H7J1 279 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 TMBIM4Q9HC24 238 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 CPNE5Q9HCH3 593 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 CUTCQ9NTM9 273 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 C20orf141Q9NUB4 165 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 SLC38A7Q9NVC3 462 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 NECAP2Q9NVZ3 263 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 MTMR10Q9NXD2 777 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 XPR1Q9UBH6 696 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 LRWD1Q9UFC0 647 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 SLC23A1Q9UHI7 598 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 KCNG2Q9UJ96 466 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 ELF5Q9UKW6 265 aaPredicted RBP4.94□□□□□ -1.62
VPS41-209ENST00000457055 ZDHHC8Q9ULC8 765 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 MOKQ9UQ07 419 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 PDE10AQ9Y233 779 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 MAP3K2Q9Y2U5 619 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 PPIAL4AQ9Y536 164 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 UMODL1Q5DID0 1318 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 SPTBN5Q9NRC6 3674 aaKnown RBP4.93□□□□□ -1.62
VPS41-209ENST00000457055 HTTP42858 3142 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 ZNF831Q5JPB2 1677 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 A0A1W2PPM1 405 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 A0A1W2PR77 199 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 C9orf170A2RU37 121 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 DISC1C4P0D8 188 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 E5RJQ4 531 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 G3V2T6 193 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 M0QXV9 152 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 PDXKO00764 312 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 TEX33O43247 280 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 DLEU1O43261 78 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 DHHO43323 396 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 PCDH7O60245 1069 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 TPST2O60704 377 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 SCGNO76038 276 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 SCELO95171 688 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 VAPBO95292 243 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 CBX6O95503 412 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 ETHE1O95571 254 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 CYB5R3P00387 301 aaPredicted RBP4.93□□□□□ -1.62
VPS41-209ENST00000457055 ZNF806P0C7X5 589 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 IFI30P13284 250 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 CSNK2A2P19784 350 aaPredicted RBP4.93□□□□□ -1.62
VPS41-209ENST00000457055 CD82P27701 267 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 RBMS1P29558 406 aaKnown RBP4.93□□□□□ -1.62
VPS41-209ENST00000457055 PRDX2P32119 198 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 TIMP3P35625 211 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 NUMBP49757 651 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 HLCSP50747 726 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 CCR6P51684 374 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 NAPAP54920 295 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 OR4D2P58180 307 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 HSD11B2P80365 405 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 MRPS11P82912 194 aaKnown RBP4.93□□□□□ -1.62
VPS41-209ENST00000457055 FAM3AP98173 230 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 SORDQ00796 357 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 IFITM2Q01629 132 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 OGDHQ02218 1023 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 SEMG2Q02383 582 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 ZNF91Q05481 1191 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 SRSF6Q13247 344 aaKnown RBP4.93□□□□□ -1.62
VPS41-209ENST00000457055 TFDP2Q14188 446 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 POU2AF1Q16633 256 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 KNOP1Q1ED39 458 aaKnown RBP4.93□□□□□ -1.62
VPS41-209ENST00000457055 SOWAHAQ2M3V2 549 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 LIN52Q52LA3 116 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 WASHC2DQ5SRD0 308 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 IDNKQ5T6J7 187 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 MANEALQ5VSG8 457 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 SUSD4Q5VX71 490 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 TXNDC8Q6A555 127 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 SLC39A4Q6P5W5 647 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 ABHD15Q6UXT9 468 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 ZNF836Q6ZNA1 936 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 APTXQ7Z2E3 356 aaKnown RBP4.93□□□□□ -1.62
VPS41-209ENST00000457055 SLC22A16Q86VW1 577 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 SERPINA9Q86WD7 417 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 ZC3H3Q8IXZ2 948 aaKnown RBP4.93□□□□□ -1.62
VPS41-209ENST00000457055 LGI2Q8N0V4 545 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 DEFB123Q8N688 67 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 AMER3Q8N944 861 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 HJURPQ8NCD3 748 aaPredicted RBP4.93□□□□□ -1.62
VPS41-209ENST00000457055 TMEM161BQ8NDZ6 487 aa4.93□□□□□ -1.62
VPS41-209ENST00000457055 OR1L4Q8NGR5 311 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms