RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 C3orf49Q96BT1 292 aa20.6■□□□□ 0.89
CBX3-204ENST00000456948 FRS3O43559 492 aa20.59■□□□□ 0.89
CBX3-204ENST00000456948 AHSA1O95433 338 aa20.59■□□□□ 0.89
CBX3-204ENST00000456948 IL32P24001 234 aa20.59■□□□□ 0.89
CBX3-204ENST00000456948 GTF2E2P29084 291 aaKnown RBP20.59■□□□□ 0.89
CBX3-204ENST00000456948 OR3A2P47893 321 aa20.59■□□□□ 0.89
CBX3-204ENST00000456948 PCBP3P57721 371 aaKnown RBP20.59■□□□□ 0.89
CBX3-204ENST00000456948 H3F3AP84243 136 aa20.59■□□□□ 0.89
CBX3-204ENST00000456948 CEACAM7Q14002 265 aa20.59■□□□□ 0.89
CBX3-204ENST00000456948 SELPLGQ14242 412 aa20.59■□□□□ 0.89
CBX3-204ENST00000456948 VMACQ2NL98 169 aa20.59■□□□□ 0.89
CBX3-204ENST00000456948 C1orf140Q5VVS0 124 aa20.59■□□□□ 0.89
CBX3-204ENST00000456948 FAM91A1Q658Y4 838 aa20.59■□□□□ 0.89
CBX3-204ENST00000456948 ABLIM2Q6H8Q1 611 aa20.59■□□□□ 0.89
CBX3-204ENST00000456948 STAC2Q6ZMT1 411 aa20.59■□□□□ 0.89
CBX3-204ENST00000456948 CDC20BQ86Y33 519 aa20.59■□□□□ 0.89
CBX3-204ENST00000456948 DNAJA3Q96EY1 480 aa20.59■□□□□ 0.89
CBX3-204ENST00000456948 SLC47A1Q96FL8 570 aa20.59■□□□□ 0.89
CBX3-204ENST00000456948 ELAC2Q9BQ52 826 aaKnown RBP20.59■□□□□ 0.89
CBX3-204ENST00000456948 SPG11Q96JI7 2443 aa20.59■□□□□ 0.89
CBX3-204ENST00000456948 TACC2O95359 2948 aa20.59■□□□□ 0.89
CBX3-204ENST00000456948 PDZD2O15018 2839 aa20.59■□□□□ 0.89
CBX3-204ENST00000456948 ABCA4P78363 2273 aa20.58■□□□□ 0.89
CBX3-204ENST00000456948 OR2T1O43869 369 aa20.58■□□□□ 0.89
CBX3-204ENST00000456948 MRPL33O75394 65 aaKnown RBP20.58■□□□□ 0.89
CBX3-204ENST00000456948 VAMP5O95183 116 aa20.58■□□□□ 0.89
CBX3-204ENST00000456948 SLC16A1P53985 500 aa20.58■□□□□ 0.89
CBX3-204ENST00000456948 HOXC5Q00444 222 aa20.58■□□□□ 0.89
CBX3-204ENST00000456948 OR7A5Q15622 319 aa20.58■□□□□ 0.89
CBX3-204ENST00000456948 ALG10BQ5I7T1 473 aa20.58■□□□□ 0.89
CBX3-204ENST00000456948 TMEM225Q6GV28 225 aa20.58■□□□□ 0.89
CBX3-204ENST00000456948 Q6ZT83 130 aa20.58■□□□□ 0.89
CBX3-204ENST00000456948 ARPINQ7Z6K5 226 aa20.58■□□□□ 0.89
CBX3-204ENST00000456948 ATG4DQ86TL0 474 aaPredicted RBP20.58■□□□□ 0.89
CBX3-204ENST00000456948 RNF217Q8TC41 542 aa20.58■□□□□ 0.89
CBX3-204ENST00000456948 APH1AQ96BI3 265 aa20.58■□□□□ 0.89
CBX3-204ENST00000456948 ZNF775Q96BV0 537 aaPredicted RBP20.58■□□□□ 0.89
CBX3-204ENST00000456948 ZNF300Q96RE9 604 aaPredicted RBP20.58■□□□□ 0.89
CBX3-204ENST00000456948 SF3B5Q9BWJ5 86 aaKnown RBP20.58■□□□□ 0.89
CBX3-204ENST00000456948 NGBQ9NPG2 151 aa20.58■□□□□ 0.89
CBX3-204ENST00000456948 ARMCX1Q9P291 453 aa20.58■□□□□ 0.89
CBX3-204ENST00000456948 SLC9A8Q9Y2E8 581 aa20.58■□□□□ 0.89
CBX3-204ENST00000456948 ANKRD17O75179 2603 aaKnown RBP20.57■□□□□ 0.88
CBX3-204ENST00000456948 ZC3H12DA2A288 527 aaKnown RBP20.57■□□□□ 0.88
CBX3-204ENST00000456948 GMNCA6NCL1 334 aa20.57■□□□□ 0.88
CBX3-204ENST00000456948 LIPT2A6NK58 231 aa20.57■□□□□ 0.88
CBX3-204ENST00000456948 TPST1O60507 370 aa20.57■□□□□ 0.88
CBX3-204ENST00000456948 IMPDH2P12268 514 aa20.57■□□□□ 0.88
CBX3-204ENST00000456948 CRYGSP22914 178 aa20.57■□□□□ 0.88
CBX3-204ENST00000456948 DMTNQ08495 405 aa20.57■□□□□ 0.88
CBX3-204ENST00000456948 BNIP2Q12982 314 aa20.57■□□□□ 0.88
CBX3-204ENST00000456948 ITGADQ13349 1161 aa20.57■□□□□ 0.88
CBX3-204ENST00000456948 VEZF1Q14119 521 aa20.57■□□□□ 0.88
CBX3-204ENST00000456948 OTUD3Q5T2D3 398 aaPredicted RBP20.57■□□□□ 0.88
CBX3-204ENST00000456948 ANKRD34AQ69YU3 496 aa20.57■□□□□ 0.88
CBX3-204ENST00000456948 SSX8Q7RTT4 187 aa20.57■□□□□ 0.88
CBX3-204ENST00000456948 CXorf67Q86X51 503 aaPredicted RBP20.57■□□□□ 0.88
CBX3-204ENST00000456948 GABRG1Q8N1C3 465 aa20.57■□□□□ 0.88
CBX3-204ENST00000456948 UBE2J2Q8N2K1 259 aa20.57■□□□□ 0.88
CBX3-204ENST00000456948 SMYD1Q8NB12 490 aa20.57■□□□□ 0.88
CBX3-204ENST00000456948 KISS1RQ969F8 398 aaPredicted RBP20.57■□□□□ 0.88
CBX3-204ENST00000456948 ZC3HAV1LQ96H79 300 aaKnown RBP20.57■□□□□ 0.88
CBX3-204ENST00000456948 ACTR6Q9GZN1 396 aa20.57■□□□□ 0.88
CBX3-204ENST00000456948 FAM107BQ9H098 131 aa20.57■□□□□ 0.88
CBX3-204ENST00000456948 PIF1Q9H611 641 aa20.57■□□□□ 0.88
CBX3-204ENST00000456948 EFCAB1Q9HAE3 211 aa20.57■□□□□ 0.88
CBX3-204ENST00000456948 ADPRHL2Q9NX46 363 aa20.57■□□□□ 0.88
CBX3-204ENST00000456948 ING1Q9UK53 422 aaPredicted RBP20.57■□□□□ 0.88
CBX3-204ENST00000456948 A0A1B0GWA3 101 aa20.56■□□□□ 0.88
CBX3-204ENST00000456948 ZNF716A6NP11 495 aa20.56■□□□□ 0.88
CBX3-204ENST00000456948 DYNC1I1O14576 645 aa20.56■□□□□ 0.88
CBX3-204ENST00000456948 FMO6PO60774 539 aa20.56■□□□□ 0.88
CBX3-204ENST00000456948 LGI1O95970 557 aa20.56■□□□□ 0.88
CBX3-204ENST00000456948 ADAP00813 363 aa20.56■□□□□ 0.88
CBX3-204ENST00000456948 SFRP5Q5T4F7 317 aa20.56■□□□□ 0.88
CBX3-204ENST00000456948 C6orf89Q6UWU4 347 aa20.56■□□□□ 0.88
CBX3-204ENST00000456948 CCDC103Q8IW40 242 aa20.56■□□□□ 0.88
CBX3-204ENST00000456948 MFSD8Q8NHS3 518 aa20.56■□□□□ 0.88
CBX3-204ENST00000456948 SLC38A4Q969I6 547 aa20.56■□□□□ 0.88
CBX3-204ENST00000456948 CMTM5Q96DZ9 223 aa20.56■□□□□ 0.88
CBX3-204ENST00000456948 EPYCQ99645 322 aa20.56■□□□□ 0.88
CBX3-204ENST00000456948 CSMD2Q7Z408 3487 aa20.56■□□□□ 0.88
CBX3-204ENST00000456948 NDUFAB1O14561 156 aa20.55■□□□□ 0.88
CBX3-204ENST00000456948 COX4I1P13073 169 aa20.55■□□□□ 0.88
CBX3-204ENST00000456948 LSP1P33241 339 aa20.55■□□□□ 0.88
CBX3-204ENST00000456948 SEC24CP53992 1094 aa20.55■□□□□ 0.88
CBX3-204ENST00000456948 OR1Q1Q15612 314 aa20.55■□□□□ 0.88
CBX3-204ENST00000456948 GLIPR1L2Q4G1C9 344 aa20.55■□□□□ 0.88
CBX3-204ENST00000456948 RABL3Q5HYI8 236 aa20.55■□□□□ 0.88
CBX3-204ENST00000456948 SWT1Q5T5J6 900 aaKnown RBP20.55■□□□□ 0.88
CBX3-204ENST00000456948 CCDC80Q76M96 950 aa20.55■□□□□ 0.88
CBX3-204ENST00000456948 HSD17B8Q92506 261 aa20.55■□□□□ 0.88
CBX3-204ENST00000456948 PROX1Q92786 737 aa20.55■□□□□ 0.88
CBX3-204ENST00000456948 NINJ1Q92982 152 aa20.55■□□□□ 0.88
CBX3-204ENST00000456948 RCN3Q96D15 328 aa20.55■□□□□ 0.88
CBX3-204ENST00000456948 HOPXQ9BPY8 73 aaPredicted RBP20.55■□□□□ 0.88
CBX3-204ENST00000456948 C6orf203Q9P0P8 240 aaPredicted RBP20.55■□□□□ 0.88
CBX3-204ENST00000456948 BAG5Q9UL15 447 aa20.55■□□□□ 0.88
CBX3-204ENST00000456948 POLQO75417 2590 aa20.55■□□□□ 0.88
CBX3-204ENST00000456948 AQP7P3A6NL99 342 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms