RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 RUNDC3AQ59EK9 446 aa14.36□□□□□ -0.11
CPSF6-203ENST00000456847 OTUD3Q5T2D3 398 aaPredicted RBP14.36□□□□□ -0.11
CPSF6-203ENST00000456847 METTL21CQ5VZV1 264 aa14.36□□□□□ -0.11
CPSF6-203ENST00000456847 DLEU7Q6UYE1 221 aa14.36□□□□□ -0.11
CPSF6-203ENST00000456847 SLC35B4Q969S0 331 aa14.36□□□□□ -0.11
CPSF6-203ENST00000456847 C3orf49Q96BT1 292 aa14.36□□□□□ -0.11
CPSF6-203ENST00000456847 ZNF607Q96SK3 696 aa14.36□□□□□ -0.11
CPSF6-203ENST00000456847 NGBQ9NPG2 151 aa14.36□□□□□ -0.11
CPSF6-203ENST00000456847 GMEB1Q9Y692 573 aa14.36□□□□□ -0.11
CPSF6-203ENST00000456847 F8P00451 2351 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 KLF4O43474 513 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 LOXP28300 417 aaPredicted RBP14.35□□□□□ -0.11
CPSF6-203ENST00000456847 ADSLP30566 484 aaPredicted RBP14.35□□□□□ -0.11
CPSF6-203ENST00000456847 ARFIP2P53365 341 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 MTPNP58546 118 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 ACKR1Q16570 336 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 PAQR6Q6TCH4 344 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 ZNF704Q6ZNC4 412 aaPredicted RBP14.35□□□□□ -0.11
CPSF6-203ENST00000456847 HIPK4Q8NE63 616 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 HSD17B8Q92506 261 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 CGREF1Q99674 301 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 CCL19Q99731 98 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 USB1Q9BQ65 265 aaKnown RBP14.35□□□□□ -0.11
CPSF6-203ENST00000456847 BEX4Q9NWD9 120 aaPredicted RBP14.35□□□□□ -0.11
CPSF6-203ENST00000456847 ADPRHL2Q9NX46 363 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 SLC9A8Q9Y2E8 581 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 PRORSD1PA6NEY8 169 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 LIPT2A6NK58 231 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 ELOA3DA6NLF2 546 aaPredicted RBP14.35□□□□□ -0.11
CPSF6-203ENST00000456847 AKR7A3O95154 331 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 AHSA1O95433 338 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 CNOT4O95628 575 aaKnown RBP14.35□□□□□ -0.11
CPSF6-203ENST00000456847 IGHV1-2P23083 117 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 TAB1Q15750 504 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 ELOA3BQ3SY89 546 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 FBXW9Q5XUX1 488 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 DHRS4L2Q6PKH6 230 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 C20orf204Q6ZNR8 217 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 RETREG3Q86VR2 466 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 DPP10Q8N608 796 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 C11orf65Q8NCR3 313 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 ELOA3Q8NG57 546 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 TSPEARQ8WU66 669 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 ANKRD27Q96NW4 1050 aa14.35□□□□□ -0.11
CPSF6-203ENST00000456847 RAI1Q7Z5J4 1906 aaPredicted RBP14.35□□□□□ -0.11
CPSF6-203ENST00000456847 MED13LQ71F56 2210 aa14.34□□□□□ -0.11
CPSF6-203ENST00000456847 PRRC2AP48634 2157 aaKnown RBP14.34□□□□□ -0.11
CPSF6-203ENST00000456847 CIB4A0PJX0 185 aa14.34□□□□□ -0.11
CPSF6-203ENST00000456847 SERPINB7O75635 380 aa14.34□□□□□ -0.11
CPSF6-203ENST00000456847 GTF2E2P29084 291 aaKnown RBP14.34□□□□□ -0.11
CPSF6-203ENST00000456847 RGS8P57771 180 aaPredicted RBP14.34□□□□□ -0.11
CPSF6-203ENST00000456847 H3F3AP84243 136 aa14.34□□□□□ -0.11
CPSF6-203ENST00000456847 C1orf140Q5VVS0 124 aa14.34□□□□□ -0.11
CPSF6-203ENST00000456847 ATG4DQ86TL0 474 aaPredicted RBP14.34□□□□□ -0.11
CPSF6-203ENST00000456847 TGIF2LYQ8IUE0 185 aa14.34□□□□□ -0.11
CPSF6-203ENST00000456847 ARMC8Q8IUR7 673 aa14.34□□□□□ -0.11
CPSF6-203ENST00000456847 TMEM99Q8N816 258 aa14.34□□□□□ -0.11
CPSF6-203ENST00000456847 RNF217Q8TC41 542 aa14.34□□□□□ -0.11
CPSF6-203ENST00000456847 FLVCR1Q9Y5Y0 555 aa14.34□□□□□ -0.11
CPSF6-203ENST00000456847 CCT8L1PA6NM43 557 aa14.33□□□□□ -0.11
CPSF6-203ENST00000456847 TMEM229AB2RXF0 380 aa14.33□□□□□ -0.11
CPSF6-203ENST00000456847 RAD51DO75771 328 aa14.33□□□□□ -0.11
CPSF6-203ENST00000456847 GGT1P19440 569 aa14.33□□□□□ -0.11
CPSF6-203ENST00000456847 COX5AP20674 150 aa14.33□□□□□ -0.11
CPSF6-203ENST00000456847 SELPLGQ14242 412 aa14.33□□□□□ -0.11
CPSF6-203ENST00000456847 GPAT4Q86UL3 456 aa14.33□□□□□ -0.11
CPSF6-203ENST00000456847 BHLHE22Q8NFJ8 381 aaPredicted RBP14.33□□□□□ -0.11
CPSF6-203ENST00000456847 OR52E4Q8NGH9 312 aa14.33□□□□□ -0.11
CPSF6-203ENST00000456847 STK35Q8TDR2 534 aa14.33□□□□□ -0.11
CPSF6-203ENST00000456847 PIGTQ969N2 578 aa14.33□□□□□ -0.11
CPSF6-203ENST00000456847 MUCL1Q96DR8 90 aa14.33□□□□□ -0.11
CPSF6-203ENST00000456847 ESRP2Q9H6T0 727 aaKnown RBP14.33□□□□□ -0.11
CPSF6-203ENST00000456847 MRGBPQ9NV56 204 aa14.33□□□□□ -0.11
CPSF6-203ENST00000456847 PARPBPQ9NWS1 579 aa14.33□□□□□ -0.11
CPSF6-203ENST00000456847 ASB6Q9NWX5 421 aa14.33□□□□□ -0.11
CPSF6-203ENST00000456847 SELENONQ9NZV5 590 aa14.33□□□□□ -0.11
CPSF6-203ENST00000456847 UPB1Q9UBR1 384 aa14.33□□□□□ -0.11
CPSF6-203ENST00000456847 TESQ9UGI8 421 aaKnown RBP14.33□□□□□ -0.11
CPSF6-203ENST00000456847 DSCAMO60469 2012 aa14.33□□□□□ -0.12
CPSF6-203ENST00000456847 AQP7P3A6NL99 342 aa14.33□□□□□ -0.12
CPSF6-203ENST00000456847 CLOCKO15516 846 aa14.33□□□□□ -0.12
CPSF6-203ENST00000456847 TPST1O60507 370 aa14.33□□□□□ -0.12
CPSF6-203ENST00000456847 SMPD2O60906 423 aa14.33□□□□□ -0.12
CPSF6-203ENST00000456847 PLAUP00749 431 aa14.33□□□□□ -0.12
CPSF6-203ENST00000456847 GUCY1A3Q02108 690 aa14.33□□□□□ -0.12
CPSF6-203ENST00000456847 RBBP4Q09028 425 aa14.33□□□□□ -0.12
CPSF6-203ENST00000456847 FAPQ12884 760 aa14.33□□□□□ -0.12
CPSF6-203ENST00000456847 PPA1Q15181 289 aa14.33□□□□□ -0.12
CPSF6-203ENST00000456847 MMEL1Q495T6 779 aa14.33□□□□□ -0.12
CPSF6-203ENST00000456847 GLIPR1L2Q4G1C9 344 aa14.33□□□□□ -0.12
CPSF6-203ENST00000456847 TMEM225Q6GV28 225 aa14.33□□□□□ -0.12
CPSF6-203ENST00000456847 SLC25A36Q96CQ1 311 aa14.33□□□□□ -0.12
CPSF6-203ENST00000456847 TRIM2Q9C040 744 aa14.33□□□□□ -0.12
CPSF6-203ENST00000456847 RNF115Q9Y4L5 304 aa14.33□□□□□ -0.12
CPSF6-203ENST00000456847 CD3EP07766 207 aa14.32□□□□□ -0.12
CPSF6-203ENST00000456847 CD99P14209 185 aa14.32□□□□□ -0.12
CPSF6-203ENST00000456847 RPS5P46782 204 aaKnown RBP14.32□□□□□ -0.12
CPSF6-203ENST00000456847 SLC17A1Q14916 467 aa14.32□□□□□ -0.12
CPSF6-203ENST00000456847 ADRM1Q16186 407 aa14.32□□□□□ -0.12
CPSF6-203ENST00000456847 COMTD1Q86VU5 262 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms