RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 THBS1P07996 1170 aa12.65□□□□□ -0.39
PTPRE-204ENST00000455661 LAMP2P13473 410 aa12.65□□□□□ -0.39
PTPRE-204ENST00000455661 C6P13671 934 aa12.65□□□□□ -0.39
PTPRE-204ENST00000455661 NDUFS1P28331 727 aa12.65□□□□□ -0.39
PTPRE-204ENST00000455661 CBX5P45973 191 aa12.65□□□□□ -0.39
PTPRE-204ENST00000455661 EEF1A1P68104 462 aaKnown RBP12.65□□□□□ -0.39
PTPRE-204ENST00000455661 OC90Q02509 493 aaPredicted RBP12.65□□□□□ -0.39
PTPRE-204ENST00000455661 PRDX1Q06830 199 aaKnown RBP12.65□□□□□ -0.39
PTPRE-204ENST00000455661 DUSP8Q13202 625 aa12.65□□□□□ -0.39
PTPRE-204ENST00000455661 GRM7Q14831 915 aa12.65□□□□□ -0.39
PTPRE-204ENST00000455661 RBMS2Q15434 407 aaKnown RBP12.65□□□□□ -0.39
PTPRE-204ENST00000455661 ZIC1Q15915 447 aa12.65□□□□□ -0.39
PTPRE-204ENST00000455661 PDSS1Q5T2R2 415 aa12.65□□□□□ -0.39
PTPRE-204ENST00000455661 TBC1D3GQ6DHY5 549 aa12.65□□□□□ -0.39
PTPRE-204ENST00000455661 ABHD17CQ6PCB6 329 aa12.65□□□□□ -0.39
PTPRE-204ENST00000455661 TMEM17Q86X19 198 aa12.65□□□□□ -0.39
PTPRE-204ENST00000455661 RFLNBQ8N5W9 214 aa12.65□□□□□ -0.39
PTPRE-204ENST00000455661 KCT2Q8NC54 265 aa12.65□□□□□ -0.39
PTPRE-204ENST00000455661 DMRTA2Q96SC8 542 aa12.65□□□□□ -0.39
PTPRE-204ENST00000455661 PDCD1LG2Q9BQ51 273 aa12.65□□□□□ -0.39
PTPRE-204ENST00000455661 MFFQ9GZY8 342 aa12.65□□□□□ -0.39
PTPRE-204ENST00000455661 DNTTIP1Q9H147 329 aa12.65□□□□□ -0.39
PTPRE-204ENST00000455661 SLC6A17Q9H1V8 727 aa12.65□□□□□ -0.39
PTPRE-204ENST00000455661 EXOSC3Q9NQT5 275 aaKnown RBP12.65□□□□□ -0.39
PTPRE-204ENST00000455661 POT1Q9NUX5 634 aa12.65□□□□□ -0.39
PTPRE-204ENST00000455661 GMEB2Q9UKD1 530 aa12.65□□□□□ -0.39
PTPRE-204ENST00000455661 KLF2Q9Y5W3 355 aaPredicted RBP12.65□□□□□ -0.39
PTPRE-204ENST00000455661 A0A1W2PQ45 241 aaPredicted RBP12.64□□□□□ -0.39
PTPRE-204ENST00000455661 A0A1W2PQY0 241 aa12.64□□□□□ -0.39
PTPRE-204ENST00000455661 CDC123O75794 336 aaPredicted RBP12.64□□□□□ -0.39
PTPRE-204ENST00000455661 PCDH8O95206 1070 aa12.64□□□□□ -0.39
PTPRE-204ENST00000455661 RLN1P04808 185 aa12.64□□□□□ -0.39
PTPRE-204ENST00000455661 CALCBP10092 127 aa12.64□□□□□ -0.39
PTPRE-204ENST00000455661 H2BFSP57053 126 aa12.64□□□□□ -0.39
PTPRE-204ENST00000455661 PPP2CBP62714 309 aa12.64□□□□□ -0.39
PTPRE-204ENST00000455661 PPP2CAP67775 309 aa12.64□□□□□ -0.39
PTPRE-204ENST00000455661 DPTQ07507 201 aa12.64□□□□□ -0.39
PTPRE-204ENST00000455661 CBFBQ13951 182 aa12.64□□□□□ -0.39
PTPRE-204ENST00000455661 LTB4RQ15722 352 aa12.64□□□□□ -0.39
PTPRE-204ENST00000455661 ARHGAP11BQ3KRB8 267 aa12.64□□□□□ -0.39
PTPRE-204ENST00000455661 AMZ1Q400G9 498 aa12.64□□□□□ -0.39
PTPRE-204ENST00000455661 MFSD12Q6NUT3 480 aa12.64□□□□□ -0.39
PTPRE-204ENST00000455661 ARHGAP11AQ6P4F7 1023 aa12.64□□□□□ -0.39
PTPRE-204ENST00000455661 C11orf88Q6PI97 169 aa12.64□□□□□ -0.39
PTPRE-204ENST00000455661 POMGNT2Q8NAT1 580 aa12.64□□□□□ -0.39
PTPRE-204ENST00000455661 OR2AK2Q8NG84 335 aa12.64□□□□□ -0.39
PTPRE-204ENST00000455661 LILRB1Q8NHL6 650 aaPredicted RBP12.64□□□□□ -0.39
PTPRE-204ENST00000455661 NSMAFQ92636 917 aa12.64□□□□□ -0.39
PTPRE-204ENST00000455661 HAVCR1Q96D42 359 aa12.64□□□□□ -0.39
PTPRE-204ENST00000455661 ZMYND19Q96E35 227 aaPredicted RBP12.64□□□□□ -0.39
PTPRE-204ENST00000455661 MS4A4EQ96PG1 132 aa12.64□□□□□ -0.39
PTPRE-204ENST00000455661 CNN2Q99439 309 aaKnown RBP12.64□□□□□ -0.39
PTPRE-204ENST00000455661 MENTQ9BUN1 341 aa12.64□□□□□ -0.39
PTPRE-204ENST00000455661 NKX6-2Q9C056 277 aaPredicted RBP12.64□□□□□ -0.39
PTPRE-204ENST00000455661 SLC25A18Q9H1K4 315 aa12.64□□□□□ -0.39
PTPRE-204ENST00000455661 H7C2Y5 167 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 SIGLEC6O43699 453 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 CBX7O95931 251 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 GKN3PP0CG01 181 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 VSIG10L2P0DP72 767 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 RPA2P15927 270 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 CDK2P24941 298 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 MAOBP27338 520 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 CERS1P27544 350 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 HTR2AP28223 471 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 SLC6A6P31641 620 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 BCL6P41182 706 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 MC2RQ01718 297 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 PABPC1L2AQ5JQF8 200 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 ZNF613Q6PF04 617 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 SLC35F2Q8IXU6 374 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 ARL14Q8N4G2 192 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 OR2L5Q8NG80 312 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 ASB13Q8WXK3 278 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 SLITRK2Q9H156 845 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 IFT22Q9H7X7 185 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 TMEM138Q9NPI0 162 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 TAS2R3Q9NYW6 316 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 SLC23A2Q9UGH3 650 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 PCYT1BQ9Y5K3 369 aaPredicted RBP12.63□□□□□ -0.39
PTPRE-204ENST00000455661 ZNF98A6NK75 572 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 NRG2O14511 850 aaPredicted RBP12.63□□□□□ -0.39
PTPRE-204ENST00000455661 PTP4A3O75365 173 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 RBBP9O75884 186 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 PRNPP04156 253 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 SLC35G4P0C7Q5 338 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 UBBP0CG47 229 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 UBCP0CG48 685 aaKnown RBP12.63□□□□□ -0.39
PTPRE-204ENST00000455661 CLDN12P56749 244 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 TAS2R20P59543 309 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 ST8SIA6P61647 398 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 RPS27AP62979 156 aaKnown RBP12.63□□□□□ -0.39
PTPRE-204ENST00000455661 UBA52P62987 128 aaKnown RBP12.63□□□□□ -0.39
PTPRE-204ENST00000455661 CEBPEQ15744 281 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 MPPED2Q15777 294 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 LY6G5CQ5SRR4 150 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 PWWP2BQ6NUJ5 590 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 TSSK4Q6SA08 328 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 SLC36A1Q7Z2H8 476 aa12.63□□□□□ -0.39
PTPRE-204ENST00000455661 NRROSQ86YC3 692 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms