RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 RANBP3LQ86VV4 465 aaPredicted RBP12.61□□□□□ -0.39
HDAC4-205ENST00000454542 KIF18BQ86Y91 864 aa12.61□□□□□ -0.39
HDAC4-205ENST00000454542 OR52E4Q8NGH9 312 aa12.61□□□□□ -0.39
HDAC4-205ENST00000454542 OR6T1Q8NGN1 323 aa12.61□□□□□ -0.39
HDAC4-205ENST00000454542 PIGXQ8TBF5 258 aa12.61□□□□□ -0.39
HDAC4-205ENST00000454542 DNAJA4Q8WW22 397 aaPredicted RBP12.61□□□□□ -0.39
HDAC4-205ENST00000454542 ZHX1-C8orf76Q96EF9 292 aa12.61□□□□□ -0.39
HDAC4-205ENST00000454542 PTDSS2Q9BVG9 487 aa12.61□□□□□ -0.39
HDAC4-205ENST00000454542 SLC13A4Q9UKG4 626 aa12.61□□□□□ -0.39
HDAC4-205ENST00000454542 CSMD1Q96PZ7 3565 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 NDUFAB1O14561 156 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 EIF1BO60739 113 aaKnown RBP12.6□□□□□ -0.39
HDAC4-205ENST00000454542 RAMP1O60894 148 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 SMNDC1O75940 238 aaKnown RBP eCLIP12.6□□□□□ -0.39
HDAC4-205ENST00000454542 LYPD3O95274 346 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 YES1P07947 543 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 PNMTP11086 282 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 CCNA2P20248 432 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 IDUAP35475 653 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 CD79BP40259 229 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 GSK3BP49841 420 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 P2RY4P51582 365 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 SLC35A1P78382 337 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 LIPEQ05469 1076 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 RASGEF1BQ0VAM2 473 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 BNIP2Q12982 314 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 OR1Q1Q15612 314 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 FXNQ16595 210 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 ALG10BQ5I7T1 473 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 C1orf140Q5VVS0 124 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 ZNF613Q6PF04 617 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 C5orf46Q6UWT4 87 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 NUFIP2Q7Z417 695 aaKnown RBP12.6□□□□□ -0.39
HDAC4-205ENST00000454542 TSPYL5Q86VY4 417 aaPredicted RBP12.6□□□□□ -0.39
HDAC4-205ENST00000454542 TUSC5Q8IXB3 177 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 SLC38A4Q969I6 547 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 LRRC37BQ96QE4 947 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 ZNF300Q96RE9 604 aaPredicted RBP12.6□□□□□ -0.39
HDAC4-205ENST00000454542 ALG2Q9H553 416 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 ELOVL5Q9NYP7 299 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 ITPR2Q14571 2701 aa12.6□□□□□ -0.39
HDAC4-205ENST00000454542 APCP25054 2843 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 A0A087WUJ7 227 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 FAM221AA4D161 298 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 AQP7P3A6NL99 342 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 THY1P04216 161 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 GPIP06744 558 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 SSTR2P30874 369 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 KDELR2P33947 212 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 CPOXP36551 454 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 OR2B6P58173 313 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 PSME3P61289 254 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 KRT72Q14CN4 511 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 TMEM201Q5SNT2 666 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 GKAP1Q5VSY0 366 aaPredicted RBP12.59□□□□□ -0.39
HDAC4-205ENST00000454542 ULK3Q6PHR2 472 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 LINC00114Q6XXX2 140 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 RBM45Q8IUH3 476 aaKnown RBP12.59□□□□□ -0.39
HDAC4-205ENST00000454542 ZNF610Q8N9Z0 462 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 OR6S1Q8NH40 331 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 FAM222BQ8WU58 562 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 DNAJA3Q96EY1 480 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 MCHR1Q99705 422 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 ZNF426Q9BUY5 554 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 PRR14Q9BWN1 585 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 SPAG4Q9NPE6 437 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 ARL8BQ9NVJ2 186 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 CRIM1Q9NZV1 1036 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 RPS6KB2Q9UBS0 482 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 TAGLN3Q9UI15 199 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 ADAM21Q9UKJ8 722 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 BAG5Q9UL15 447 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 TESMINQ9Y4I5 508 aa12.59□□□□□ -0.39
HDAC4-205ENST00000454542 CSMD2Q7Z408 3487 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 ELOA3DA6NLF2 546 aaPredicted RBP12.58□□□□□ -0.4
HDAC4-205ENST00000454542 CHP2O43745 196 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 GOSR1O95249 250 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 AHSA1O95433 338 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 FPR1P21462 350 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 EDNRAP25101 427 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 UGT2B10P36537 528 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 KIR2DL3P43628 341 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 OR3A2P47893 321 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 CDH12P55289 794 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 CEACAM7Q14002 265 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 OR7A5Q15622 319 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 ELOA3BQ3SY89 546 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 LRRC23Q53EV4 343 aaPredicted RBP12.58□□□□□ -0.4
HDAC4-205ENST00000454542 CYBRD1Q53TN4 286 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 PGAM4Q8N0Y7 254 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 GABRG1Q8N1C3 465 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 FITM2Q8N6M3 262 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 ELOA3Q8NG57 546 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 MFSD8Q8NHS3 518 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 SLC26A7Q8TE54 656 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 SLC47A1Q96FL8 570 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 TMEM43Q9BTV4 400 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 POLR2J2Q9GZM3 115 aaKnown RBP12.58□□□□□ -0.4
HDAC4-205ENST00000454542 POLR2J3Q9H1A7 115 aaKnown RBP12.58□□□□□ -0.4
HDAC4-205ENST00000454542 TMEM27Q9HBJ8 222 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms