RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 RNF4P78317 190 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 NNATQ16517 81 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 BTBD16Q32M84 506 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 FIGNL1Q6PIW4 674 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 ZNF782Q6ZMW2 699 aaPredicted RBP14.54□□□□□ -0.08
SNX17-204ENST00000453453 FRRS1Q6ZNA5 592 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 PHC2Q8IXK0 858 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 LINC00471Q8N535 108 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 OR8K3Q8NH51 312 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 NKD1Q969G9 470 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 NXPE2Q96DL1 559 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 SOSTQ9BQB4 213 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 POLR2J2Q9GZM3 115 aaKnown RBP14.54□□□□□ -0.08
SNX17-204ENST00000453453 PTTG3PQ9NZH4 202 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 SLC13A4Q9UKG4 626 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 TMCC3Q9ULS5 477 aa14.54□□□□□ -0.08
SNX17-204ENST00000453453 LOC101059948A0A1B0GTJ6 334 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 A0A1W2PQ72 361 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 A8MV72 311 aaPredicted RBP14.53□□□□□ -0.08
SNX17-204ENST00000453453 SOCS6O14544 535 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 TSPAN19P0C672 248 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 PRKAR1AP10644 381 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 LIPCP11150 499 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 HTR2BP41595 481 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 CLDN20P56880 219 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 NRG3P56975 720 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 ZNF91Q05481 1191 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 RTP5Q14D33 572 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 GPR68Q15743 365 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 FLYWCH1Q4VC44 716 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 Q5BKY6 102 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 ZMAT1Q5H9K5 638 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 TYW3Q6IPR3 259 aaKnown RBP14.53□□□□□ -0.08
SNX17-204ENST00000453453 CASP12Q6UXS9 341 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 PPP1R32Q7Z5V6 425 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 SLC34A3Q8N130 599 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 FAM26EQ8N5C1 309 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 APCDD1LQ8NCL9 501 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 OR11G2Q8NGC1 345 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 NUBPLQ8TB37 319 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 ADIPOR1Q96A54 375 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 KCTD7Q96MP8 289 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 MESP1Q9BRJ9 268 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 SAP130Q9H0E3 1048 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 NXF5Q9H1B4 397 aaKnown RBP14.53□□□□□ -0.08
SNX17-204ENST00000453453 MMP28Q9H239 520 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 ABCB9Q9NP78 766 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 TIGARQ9NQ88 270 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 MRPS18AQ9NVS2 196 aaKnown RBP14.53□□□□□ -0.08
SNX17-204ENST00000453453 TXNL4BQ9NX01 149 aaKnown RBP14.53□□□□□ -0.08
SNX17-204ENST00000453453 REV1Q9UBZ9 1251 aa14.53□□□□□ -0.08
SNX17-204ENST00000453453 PLEKHB1Q9UF11 243 aaPredicted RBP14.53□□□□□ -0.08
SNX17-204ENST00000453453 PRAMEF25A6NGN4 478 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 OR6C70A6NIJ9 312 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 PEX12O00623 359 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 TERTO14746 1132 aaKnown RBP14.52□□□□□ -0.08
SNX17-204ENST00000453453 TFECO14948 347 aaPredicted RBP14.52□□□□□ -0.08
SNX17-204ENST00000453453 PLA2G10O15496 165 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 FCMRO60667 390 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 ICMTO60725 284 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 ZFAND5O76080 213 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 CDRT1O95170 752 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 RAB36O95755 333 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 DBIP07108 87 aaKnown RBP14.52□□□□□ -0.08
SNX17-204ENST00000453453 KIR2DL3P43628 341 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 NR0B1P51843 470 aaKnown RBP14.52□□□□□ -0.08
SNX17-204ENST00000453453 BTG1P62324 171 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 MAB21L1Q13394 359 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 TPBGQ13641 420 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 KLHL22Q53GT1 634 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 ZNF311Q5JNZ3 666 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 KIRREL2Q6UWL6 708 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 OLIG3Q7RTU3 272 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 HDDC2Q7Z4H3 204 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 BCORP1Q8N888 145 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 OR4N2Q8NGD1 307 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 M1APQ8TC57 530 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 DIRAS2Q96HU8 199 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 IP6K3Q96PC2 410 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 FYTTD1Q96QD9 318 aaKnown RBP14.52□□□□□ -0.08
SNX17-204ENST00000453453 PINK1Q9BXM7 581 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 DEFB126Q9BYW3 111 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 ATP13A2Q9NQ11 1180 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 ADAM30Q9UKF2 790 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 BOLA1Q9Y3E2 137 aa14.52□□□□□ -0.08
SNX17-204ENST00000453453 SPEGQ15772 3267 aa14.52□□□□□ -0.09
SNX17-204ENST00000453453 A0A0B4J293 547 aa14.52□□□□□ -0.09
SNX17-204ENST00000453453 TMEM129A0AVI4 362 aa14.52□□□□□ -0.09
SNX17-204ENST00000453453 B8ZZF3 427 aa14.52□□□□□ -0.09
SNX17-204ENST00000453453 ORC5O43913 435 aa14.52□□□□□ -0.09
SNX17-204ENST00000453453 ICAM2P13598 275 aa14.52□□□□□ -0.09
SNX17-204ENST00000453453 AZGP1P25311 298 aaKnown RBP14.52□□□□□ -0.09
SNX17-204ENST00000453453 IL12BP29460 328 aa14.52□□□□□ -0.09
SNX17-204ENST00000453453 FGF9P31371 208 aaPredicted RBP14.52□□□□□ -0.09
SNX17-204ENST00000453453 SOX3P41225 446 aa14.52□□□□□ -0.09
SNX17-204ENST00000453453 KCNJ5P48544 419 aa14.52□□□□□ -0.09
SNX17-204ENST00000453453 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.52□□□□□ -0.09
SNX17-204ENST00000453453 EIPR1Q53HC9 387 aa14.52□□□□□ -0.09
SNX17-204ENST00000453453 ESCO2Q56NI9 601 aa14.52□□□□□ -0.09
SNX17-204ENST00000453453 PYDC2Q56P42 97 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms