RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 CRLF1O75462 422 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 TBX6O95947 436 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 IGHV3-13P01766 116 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 CRYGCP07315 174 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 SNRPCP09234 159 aaKnown RBP3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 UMPSP11172 480 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 CCNB1P14635 433 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 PRKACAP17612 351 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 SHC1P29353 583 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 OPRD1P41143 372 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 XCR1P46094 333 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 BCAP31P51572 246 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 HADHBP55084 474 aaKnown RBP3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 PAX5Q02548 391 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 IRF8Q02556 426 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 FCHO2Q0JRZ9 810 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 DUSP7Q16829 419 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 KRTAP27-1Q3LI81 207 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 RFWD3Q6PCD5 774 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 GTSCR1Q86UQ5 136 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 CATSPER3Q86XQ3 398 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 MTURNQ8N3F0 131 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 PQLC3Q8N755 202 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 B3GNT7Q8NFL0 401 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 OR4F6Q8NGB9 312 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 OR52H1Q8NGJ2 320 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 ADAMTS16Q8TE57 1224 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 ARNTL2Q8WYA1 636 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 TAF15Q92804 592 aaKnown RBP eCLIP3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 SOSTQ9BQB4 213 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 ELOVL6Q9H5J4 265 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 GNB4Q9HAV0 340 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 PNO1Q9NRX1 252 aaKnown RBP3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 C20orf96Q9NUD7 363 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 NUDT15Q9NV35 164 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 RHBDD3Q9Y3P4 386 aa3.98□□□□□ -1.77
HMGB1P26-201ENST00000452520 A0A1B0GUS0 222 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 TCRBV9S1A1TA0A576 114 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 RPL37AP8A6NKH3 93 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 KIF2AO00139 706 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 TRDMT1O14717 391 aaKnown RBP3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 RNF113AO15541 343 aaKnown RBP3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 SEMA4FO95754 770 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 RNH1P13489 461 aaKnown RBP3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 SRMP19623 302 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 IDSP22304 550 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 LMO2P25791 158 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 STOMP27105 288 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 OR1D4P47884 311 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 GSK3BP49841 420 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 DAOAP59103 153 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 RPS14P62263 151 aaKnown RBP3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 RAB11AP62491 216 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 GRB7Q14451 532 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 RAB11BQ15907 218 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 C17orf58Q2M2W7 97 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 VPS26BQ4G0F5 336 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 C9orf66Q5T8R8 295 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 TWF2Q6IBS0 349 aaKnown RBP3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 ARMCX5Q6P1M9 558 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 VTCN1Q7Z7D3 282 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 MYPOPQ86VE0 399 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 C4orf32Q8N8J7 132 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 MRPS31Q92665 395 aaKnown RBP3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 LRRC39Q96DD0 335 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 C9orf85Q96MD7 179 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 KCNA7Q96RP8 456 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 TBX15Q96SF7 602 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 P2RY13Q9BPV8 354 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 HCAR1Q9BXC0 346 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 NAT10Q9H0A0 1025 aaKnown RBP3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 C8orf33Q9H7E9 229 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 LYRM4Q9HD34 91 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 MTCH1Q9NZJ7 389 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 PHF11Q9UIL8 331 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 ANGPTL2Q9UKU9 493 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 COPS3Q9UNS2 423 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 RNF24Q9Y225 148 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 PIK3R4Q99570 1358 aa3.97□□□□□ -1.77
HMGB1P26-201ENST00000452520 USP6P35125 1406 aa3.96□□□□□ -1.77
HMGB1P26-201ENST00000452520 LOC100131303A0A0U1RQF7 123 aa3.96□□□□□ -1.78
HMGB1P26-201ENST00000452520 CCDC182A6NF36 153 aa3.96□□□□□ -1.78
HMGB1P26-201ENST00000452520 IDSB3KWA1 339 aa3.96□□□□□ -1.78
HMGB1P26-201ENST00000452520 ZNF701M0R085 212 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P26-201ENST00000452520 NDUFS8O00217 210 aa3.96□□□□□ -1.78
HMGB1P26-201ENST00000452520 LYPD3O95274 346 aa3.96□□□□□ -1.78
HMGB1P26-201ENST00000452520 C1orf105O95561 183 aa3.96□□□□□ -1.78
HMGB1P26-201ENST00000452520 GNA14O95837 355 aa3.96□□□□□ -1.78
HMGB1P26-201ENST00000452520 LGALS2P05162 132 aa3.96□□□□□ -1.78
HMGB1P26-201ENST00000452520 UBTFL6P0CB48 400 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P26-201ENST00000452520 ZNF24P17028 368 aa3.96□□□□□ -1.78
HMGB1P26-201ENST00000452520 COX5AP20674 150 aa3.96□□□□□ -1.78
HMGB1P26-201ENST00000452520 GSTM3P21266 225 aa3.96□□□□□ -1.78
HMGB1P26-201ENST00000452520 GTF2E2P29084 291 aaKnown RBP3.96□□□□□ -1.78
HMGB1P26-201ENST00000452520 CD151P48509 253 aa3.96□□□□□ -1.78
HMGB1P26-201ENST00000452520 ITIH4Q14624 930 aa3.96□□□□□ -1.78
HMGB1P26-201ENST00000452520 STK11Q15831 433 aa3.96□□□□□ -1.78
HMGB1P26-201ENST00000452520 CNPY1Q3B7I2 92 aa3.96□□□□□ -1.78
HMGB1P26-201ENST00000452520 CARD16Q5EG05 197 aa3.96□□□□□ -1.78
HMGB1P26-201ENST00000452520 REG3GQ6UW15 175 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms