RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 GMPR2Q9P2T1 348 aaKnown RBP17.79■□□□□ 0.44
COL9A3-202ENST00000452372 CLEC4AQ9UMR7 237 aa17.79■□□□□ 0.44
COL9A3-202ENST00000452372 EMC9Q9Y3B6 208 aa17.79■□□□□ 0.44
COL9A3-202ENST00000452372 ZFHX3Q15911 3703 aa17.79■□□□□ 0.44
COL9A3-202ENST00000452372 IGHV3-15A0A0B4J1V0 119 aa17.78■□□□□ 0.44
COL9A3-202ENST00000452372 A0A1B0GWA3 101 aa17.78■□□□□ 0.44
COL9A3-202ENST00000452372 A8MVM7 634 aa17.78■□□□□ 0.44
COL9A3-202ENST00000452372 TMEM229AB2RXF0 380 aa17.78■□□□□ 0.44
COL9A3-202ENST00000452372 FMO6PO60774 539 aa17.78■□□□□ 0.44
COL9A3-202ENST00000452372 CD8BP10966 210 aa17.78■□□□□ 0.44
COL9A3-202ENST00000452372 IMPDH2P12268 514 aa17.78■□□□□ 0.44
COL9A3-202ENST00000452372 GSK3BP49841 420 aa17.78■□□□□ 0.44
COL9A3-202ENST00000452372 CTBP2P56545 445 aa17.78■□□□□ 0.44
COL9A3-202ENST00000452372 BNIP2Q12982 314 aa17.78■□□□□ 0.44
COL9A3-202ENST00000452372 OR1Q1Q15612 314 aa17.78■□□□□ 0.44
COL9A3-202ENST00000452372 ULK3Q6PHR2 472 aa17.78■□□□□ 0.44
COL9A3-202ENST00000452372 C6orf89Q6UWU4 347 aa17.78■□□□□ 0.44
COL9A3-202ENST00000452372 LUZP2Q86TE4 346 aa17.78■□□□□ 0.44
COL9A3-202ENST00000452372 OR6T1Q8NGN1 323 aa17.78■□□□□ 0.44
COL9A3-202ENST00000452372 OR6K3Q8NGY3 331 aa17.78■□□□□ 0.44
COL9A3-202ENST00000452372 ZHX1-C8orf76Q96EF9 292 aa17.78■□□□□ 0.44
COL9A3-202ENST00000452372 SPAG4Q9NPE6 437 aa17.78■□□□□ 0.44
COL9A3-202ENST00000452372 BAG5Q9UL15 447 aa17.78■□□□□ 0.44
COL9A3-202ENST00000452372 ITPR3Q14573 2671 aa17.78■□□□□ 0.44
COL9A3-202ENST00000452372 ELOA3DA6NLF2 546 aaPredicted RBP17.77■□□□□ 0.44
COL9A3-202ENST00000452372 M0R3H8 397 aa17.77■□□□□ 0.44
COL9A3-202ENST00000452372 CYTIPO60759 359 aa17.77■□□□□ 0.44
COL9A3-202ENST00000452372 NPIPB7O75200 414 aa17.77■□□□□ 0.44
COL9A3-202ENST00000452372 PNMTP11086 282 aa17.77■□□□□ 0.44
COL9A3-202ENST00000452372 KLK2P20151 261 aa17.77■□□□□ 0.44
COL9A3-202ENST00000452372 UQCRC1P31930 480 aa17.77■□□□□ 0.44
COL9A3-202ENST00000452372 OR2B6P58173 313 aa17.77■□□□□ 0.44
COL9A3-202ENST00000452372 SLC35A1P78382 337 aa17.77■□□□□ 0.44
COL9A3-202ENST00000452372 H3F3AP84243 136 aa17.77■□□□□ 0.44
COL9A3-202ENST00000452372 NPTX1Q15818 432 aa17.77■□□□□ 0.44
COL9A3-202ENST00000452372 ELOA3BQ3SY89 546 aa17.77■□□□□ 0.44
COL9A3-202ENST00000452372 LSRQ86X29 649 aaPredicted RBP17.77■□□□□ 0.44
COL9A3-202ENST00000452372 ELOA3Q8NG57 546 aa17.77■□□□□ 0.44
COL9A3-202ENST00000452372 OR4D11Q8NGI4 311 aa17.77■□□□□ 0.44
COL9A3-202ENST00000452372 STK35Q8TDR2 534 aa17.77■□□□□ 0.44
COL9A3-202ENST00000452372 PROX1Q92786 737 aa17.77■□□□□ 0.44
COL9A3-202ENST00000452372 SLC38A4Q969I6 547 aa17.77■□□□□ 0.44
COL9A3-202ENST00000452372 DNAJA3Q96EY1 480 aa17.77■□□□□ 0.44
COL9A3-202ENST00000452372 SLC47A1Q96FL8 570 aa17.77■□□□□ 0.44
COL9A3-202ENST00000452372 MCHR1Q99705 422 aa17.77■□□□□ 0.44
COL9A3-202ENST00000452372 PLSCR4Q9NRQ2 329 aa17.77■□□□□ 0.44
COL9A3-202ENST00000452372 KLHL9Q9P2J3 617 aa17.77■□□□□ 0.44
COL9A3-202ENST00000452372 KLHL13Q9P2N7 655 aa17.77■□□□□ 0.44
COL9A3-202ENST00000452372 PROCRQ9UNN8 238 aa17.77■□□□□ 0.44
COL9A3-202ENST00000452372 ANKHD1Q8IWZ3 2542 aaKnown RBP17.77■□□□□ 0.44
COL9A3-202ENST00000452372 A0A0B4J2E0 115 aa17.76■□□□□ 0.43
COL9A3-202ENST00000452372 A0A1B0GX12 115 aa17.76■□□□□ 0.43
COL9A3-202ENST00000452372 EIF1BO60739 113 aaKnown RBP17.76■□□□□ 0.43
COL9A3-202ENST00000452372 SMNDC1O75940 238 aaKnown RBP eCLIP17.76■□□□□ 0.432e-6■□□□□ 8
COL9A3-202ENST00000452372 YES1P07947 543 aa17.76■□□□□ 0.43
COL9A3-202ENST00000452372 AGTR1P30556 359 aa17.76■□□□□ 0.43
COL9A3-202ENST00000452372 IDUAP35475 653 aa17.76■□□□□ 0.43
COL9A3-202ENST00000452372 PEX19P40855 299 aa17.76■□□□□ 0.43
COL9A3-202ENST00000452372 MNAT1P51948 309 aa17.76■□□□□ 0.43
COL9A3-202ENST00000452372 RASGEF1BQ0VAM2 473 aa17.76■□□□□ 0.43
COL9A3-202ENST00000452372 CYBRD1Q53TN4 286 aa17.76■□□□□ 0.43
COL9A3-202ENST00000452372 ALG10BQ5I7T1 473 aa17.76■□□□□ 0.43
COL9A3-202ENST00000452372 TMEM201Q5SNT2 666 aa17.76■□□□□ 0.43
COL9A3-202ENST00000452372 RBM45Q8IUH3 476 aaKnown RBP17.76■□□□□ 0.43
COL9A3-202ENST00000452372 TUSC5Q8IXB3 177 aa17.76■□□□□ 0.43
COL9A3-202ENST00000452372 PSD2Q9BQI7 771 aa17.76■□□□□ 0.43
COL9A3-202ENST00000452372 TACO1Q9BSH4 297 aaKnown RBP17.76■□□□□ 0.43
COL9A3-202ENST00000452372 RBM24Q9BX46 236 aaKnown RBP17.76■□□□□ 0.43
COL9A3-202ENST00000452372 BCO1Q9HAY6 547 aa17.76■□□□□ 0.43
COL9A3-202ENST00000452372 SELENONQ9NZV5 590 aa17.76■□□□□ 0.43
COL9A3-202ENST00000452372 ING1Q9UK53 422 aaPredicted RBP17.76■□□□□ 0.43
COL9A3-202ENST00000452372 SLC9A8Q9Y2E8 581 aa17.76■□□□□ 0.43
COL9A3-202ENST00000452372 SH3GLB1Q9Y371 365 aa17.76■□□□□ 0.43
COL9A3-202ENST00000452372 LIPT2A6NK58 231 aa17.75■□□□□ 0.43
COL9A3-202ENST00000452372 CXCR6O00574 342 aa17.75■□□□□ 0.43
COL9A3-202ENST00000452372 GSTA4O15217 222 aa17.75■□□□□ 0.43
COL9A3-202ENST00000452372 GPIP06744 558 aa17.75■□□□□ 0.43
COL9A3-202ENST00000452372 FPR1P21462 350 aa17.75■□□□□ 0.43
COL9A3-202ENST00000452372 PCYT1AP49585 367 aa17.75■□□□□ 0.43
COL9A3-202ENST00000452372 SELENOWP63302 87 aa17.75■□□□□ 0.43
COL9A3-202ENST00000452372 EGR4Q05215 589 aa17.75■□□□□ 0.43
COL9A3-202ENST00000452372 CEACAM7Q14002 265 aa17.75■□□□□ 0.43
COL9A3-202ENST00000452372 PDK3Q15120 406 aa17.75■□□□□ 0.43
COL9A3-202ENST00000452372 LRRC23Q53EV4 343 aaPredicted RBP17.75■□□□□ 0.43
COL9A3-202ENST00000452372 SWT1Q5T5J6 900 aaKnown RBP17.75■□□□□ 0.43
COL9A3-202ENST00000452372 C1orf140Q5VVS0 124 aa17.75■□□□□ 0.43
COL9A3-202ENST00000452372 ABLIM2Q6H8Q1 611 aa17.75■□□□□ 0.43
COL9A3-202ENST00000452372 ZNF613Q6PF04 617 aa17.75■□□□□ 0.43
COL9A3-202ENST00000452372 ZNF474Q6S9Z5 364 aaPredicted RBP17.75■□□□□ 0.43
COL9A3-202ENST00000452372 CDH24Q86UP0 819 aa17.75■□□□□ 0.43
COL9A3-202ENST00000452372 KIF18BQ86Y91 864 aa17.75■□□□□ 0.43
COL9A3-202ENST00000452372 PGAM4Q8N0Y7 254 aa17.75■□□□□ 0.43
COL9A3-202ENST00000452372 ZNF610Q8N9Z0 462 aa17.75■□□□□ 0.43
COL9A3-202ENST00000452372 VANGL1Q8TAA9 524 aaPredicted RBP17.75■□□□□ 0.43
COL9A3-202ENST00000452372 BCAS4Q8TDM0 211 aa17.75■□□□□ 0.43
COL9A3-202ENST00000452372 NSL1Q96IY1 281 aa17.75■□□□□ 0.43
COL9A3-202ENST00000452372 KCTD14Q9BQ13 255 aaPredicted RBP17.75■□□□□ 0.43
COL9A3-202ENST00000452372 NAA11Q9BSU3 229 aaPredicted RBP17.75■□□□□ 0.43
COL9A3-202ENST00000452372 PCDHAC1Q9H158 963 aa17.75■□□□□ 0.43
COL9A3-202ENST00000452372 OPN3Q9H1Y3 402 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms