RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 BRSK1Q8TDC3 778 aa2.75□□□□□ -1.97
VPS8-211ENST00000452140 SETD7Q8WTS6 366 aaKnown RBP2.75□□□□□ -1.97
VPS8-211ENST00000452140 TIMD4Q96H15 378 aa2.75□□□□□ -1.97
VPS8-211ENST00000452140 SLC38A2Q96QD8 506 aa2.75□□□□□ -1.97
VPS8-211ENST00000452140 PSKH2Q96QS6 385 aa2.75□□□□□ -1.97
VPS8-211ENST00000452140 CCNL2Q96S94 520 aaPredicted RBP2.75□□□□□ -1.97
VPS8-211ENST00000452140 RNF2Q99496 336 aa2.75□□□□□ -1.97
VPS8-211ENST00000452140 RBKSQ9H477 322 aa2.75□□□□□ -1.97
VPS8-211ENST00000452140 POLE4Q9NR33 117 aa2.75□□□□□ -1.97
VPS8-211ENST00000452140 DCDC2Q9UHG0 476 aa2.75□□□□□ -1.97
VPS8-211ENST00000452140 ASB3Q9Y575 518 aa2.75□□□□□ -1.97
VPS8-211ENST00000452140 SLCO1B1Q9Y6L6 691 aa2.75□□□□□ -1.97
VPS8-211ENST00000452140 CHD4Q14839 1912 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 HELTA6NFD8 242 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 A6NIZ1 184 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 ZNF780AO75290 641 aaPredicted RBP2.74□□□□□ -1.97
VPS8-211ENST00000452140 AP2A1O95782 977 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 IL1BP01584 269 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 HSMCR30P0CW71 290 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 GZMAP12544 262 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 CCDC130P13994 396 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 COX5AP20674 150 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 GABRR1P24046 479 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 CD1BP29016 333 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 RPL13AP40429 203 aaKnown RBP2.74□□□□□ -1.97
VPS8-211ENST00000452140 QARSP47897 775 aaKnown RBP2.74□□□□□ -1.97
VPS8-211ENST00000452140 EFNB2P52799 333 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 RAP1BP61224 184 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 TGFBR3Q03167 851 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 IFT88Q13099 833 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 ORC2Q13416 577 aaPredicted RBP2.74□□□□□ -1.97
VPS8-211ENST00000452140 PDK3Q15120 406 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 IL17AQ16552 155 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 CCDC14Q49A88 953 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 KCTD21Q4G0X4 260 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 PAGE3Q5JUK9 113 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 EOGTQ5NDL2 527 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 OTPQ5XKR4 325 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 OR4F3Q6IEY1 312 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 C16orf87Q6PH81 154 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 UQCC3Q6UW78 93 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 Q6ZPB1 254 aaPredicted RBP2.74□□□□□ -1.97
VPS8-211ENST00000452140 PGAP1Q75T13 922 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 NLRP9Q7RTR0 991 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 KRTAP11-1Q8IUC1 163 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 CCDC50Q8IVM0 306 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 CDH26Q8IXH8 852 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 FTMTQ8N4E7 242 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 OR4K14Q8NGD5 310 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 OR52K2Q8NGK3 314 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 HTR3CQ8WXA8 447 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 RBM14Q96PK6 669 aaKnown RBP2.74□□□□□ -1.97
VPS8-211ENST00000452140 TSG101Q99816 390 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 NAT9Q9BTE0 207 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 TMEM43Q9BTV4 400 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 CAPS2Q9BXY5 557 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 POLR2J2Q9GZM3 115 aaKnown RBP2.74□□□□□ -1.97
VPS8-211ENST00000452140 POLR2J3Q9H1A7 115 aaKnown RBP2.74□□□□□ -1.97
VPS8-211ENST00000452140 RNF167Q9H6Y7 350 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 ZDHHC11Q9H8X9 412 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 DDX18Q9NVP1 670 aaKnown RBP2.74□□□□□ -1.97
VPS8-211ENST00000452140 NMRK1Q9NWW6 199 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 KIF25Q9UIL4 384 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 BTNL2Q9UIR0 455 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 CDH9Q9ULB4 789 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 PRPF19Q9UMS4 504 aaKnown RBP2.74□□□□□ -1.97
VPS8-211ENST00000452140 COPS3Q9UNS2 423 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 TRAF3IP3Q9Y228 551 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 DDX49Q9Y6V7 483 aaKnown RBP2.74□□□□□ -1.97
VPS8-211ENST00000452140 V9GY05 133 aa2.74□□□□□ -1.97
VPS8-211ENST00000452140 ZNF646O15015 1829 aaPredicted RBP2.74□□□□□ -1.97
VPS8-211ENST00000452140 THSD7BQ9C0I4 1608 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 IGHV3OR16-13A0A075B7E8 117 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 TRAV26-1A0A087WT03 109 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 CTAGE15A4D2H0 777 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 USP27XA6NNY8 438 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 MED7O43513 233 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 ZNF861PO60384 105 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 RAMP3O60896 148 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 SCGNO76038 276 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 HPNP05981 417 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 POU2F1P14859 743 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 CXCR2P25025 360 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 GNA11P29992 359 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 CALCRP30988 508 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 MAGEA8P43361 318 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 GSSP48637 474 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 HNRNPA3P51991 378 aaKnown RBP2.73□□□□□ -1.97
VPS8-211ENST00000452140 ATP1B3P54709 279 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 AIF1P55008 147 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 TIMM10P62072 90 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 SELENOTP62341 195 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 MECOMQ03112 1051 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 KLRB1Q12918 225 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 PSG7Q13046 419 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 VGLL4Q14135 290 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 IMMTQ16891 758 aaKnown RBP2.73□□□□□ -1.97
VPS8-211ENST00000452140 EXOC3L2Q2M3D2 409 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 SFT2D3Q587I9 215 aa2.73□□□□□ -1.97
VPS8-211ENST00000452140 CARD16Q5EG05 197 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms