RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 TMEFF2Q9UIK5 374 aaPredicted RBP13.2□□□□□ -0.3
TNF-208ENST00000449264 POFUT2Q9Y2G5 429 aa13.2□□□□□ -0.3
TNF-208ENST00000449264 MRPS18CQ9Y3D5 142 aaKnown RBP13.2□□□□□ -0.3
TNF-208ENST00000449264 ZNF337Q9Y3M9 751 aa13.2□□□□□ -0.3
TNF-208ENST00000449264 TRAV36DV7A0A075B6V5 113 aa13.19□□□□□ -0.3
TNF-208ENST00000449264 EFCAB9A8MZ26 197 aa13.19□□□□□ -0.3
TNF-208ENST00000449264 CDC42EP2O14613 210 aa13.19□□□□□ -0.3
TNF-208ENST00000449264 SOX14O95416 240 aa13.19□□□□□ -0.3
TNF-208ENST00000449264 SNAP29O95721 258 aa13.19□□□□□ -0.3
TNF-208ENST00000449264 FPR3P25089 353 aa13.19□□□□□ -0.3
TNF-208ENST00000449264 SLC10A1Q14973 349 aa13.19□□□□□ -0.3
TNF-208ENST00000449264 ZIK1Q3SY52 487 aaPredicted RBP13.19□□□□□ -0.3
TNF-208ENST00000449264 TMEM176BQ3YBM2 270 aaPredicted RBP13.19□□□□□ -0.3
TNF-208ENST00000449264 KLHL17Q6TDP4 642 aa13.19□□□□□ -0.3
TNF-208ENST00000449264 STK35Q8TDR2 534 aa13.19□□□□□ -0.3
TNF-208ENST00000449264 SLC25A43Q8WUT9 341 aaPredicted RBP13.19□□□□□ -0.3
TNF-208ENST00000449264 TAAR8Q969N4 342 aa13.19□□□□□ -0.3
TNF-208ENST00000449264 SLC25A36Q96CQ1 311 aa13.19□□□□□ -0.3
TNF-208ENST00000449264 CNTNAP3BQ96NU0 1288 aa13.19□□□□□ -0.3
TNF-208ENST00000449264 OR5B2Q96R09 309 aa13.19□□□□□ -0.3
TNF-208ENST00000449264 TAAR6Q96RI8 345 aa13.19□□□□□ -0.3
TNF-208ENST00000449264 CNTNAP3Q9BZ76 1288 aa13.19□□□□□ -0.3
TNF-208ENST00000449264 UCK2Q9BZX2 261 aa13.19□□□□□ -0.3
TNF-208ENST00000449264 RIBC2Q9H4K1 309 aa13.19□□□□□ -0.3
TNF-208ENST00000449264 LDAHQ9H6V9 325 aa13.19□□□□□ -0.3
TNF-208ENST00000449264 SMPD3Q9NY59 655 aaPredicted RBP13.19□□□□□ -0.3
TNF-208ENST00000449264 NBEAQ8NFP9 2946 aa13.19□□□□□ -0.3
TNF-208ENST00000449264 A0A1W2PNR3 127 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 SEC14L5O43304 696 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 NPIPB7O75200 414 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 POU3F2P20265 443 aaPredicted RBP13.18□□□□□ -0.3
TNF-208ENST00000449264 MAP2K6P52564 334 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 RAD23AP54725 363 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 GFRA1P56159 465 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 C19orf57Q0VDD7 668 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 TSPAN31Q12999 210 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 ZNF74Q16587 644 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 SLC46A3Q7Z3Q1 461 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 UBQLNLQ8IYU4 475 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 LRRC17Q8N6Y2 441 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 OR13C2Q8NGS9 318 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 PNPLA2Q96AD5 504 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 MOGAT1Q96PD6 335 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 PTDSS2Q9BVG9 487 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 ZDHHC11Q9H8X9 412 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 KIAA1549Q9HCM3 1950 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 TRAV27A0A087WT01 109 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 UNC119BA6NIH7 251 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 KLF4O43474 513 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 OR7A10O76100 309 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 GTF2E2P29084 291 aaKnown RBP13.18□□□□□ -0.3
TNF-208ENST00000449264 IDUAP35475 653 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 GSSP48637 474 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 STARP49675 285 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 RAC1P63000 192 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 MYBPHQ13203 477 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 OR7A5Q15622 319 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 INAQ16352 499 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 GXYLT1Q4G148 440 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 FAM69AQ5T7M9 428 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 C5orf46Q6UWT4 87 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 TMPRSS11FQ6ZWK6 438 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 TRILQ7L0X0 811 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 EXD3Q8N9H8 876 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 FANK1Q8TC84 345 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 TOR3AQ9H497 397 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 NANSQ9NR45 359 aa13.18□□□□□ -0.3
TNF-208ENST00000449264 TRGV5A0A0B4J1U4 118 aa13.17□□□□□ -0.3
TNF-208ENST00000449264 NPIPA5E9PKD4 350 aa13.17□□□□□ -0.3
TNF-208ENST00000449264 H3BN98 237 aa13.17□□□□□ -0.3
TNF-208ENST00000449264 BGLAPP02818 100 aa13.17□□□□□ -0.3
TNF-208ENST00000449264 IGFBP1P08833 259 aaPredicted RBP13.17□□□□□ -0.3
TNF-208ENST00000449264 CDH2P19022 906 aaPredicted RBP13.17□□□□□ -0.3
TNF-208ENST00000449264 GSTM3P21266 225 aa13.17□□□□□ -0.3
TNF-208ENST00000449264 POU1F1P28069 291 aa13.17□□□□□ -0.3
TNF-208ENST00000449264 CLDN20P56880 219 aa13.17□□□□□ -0.3
TNF-208ENST00000449264 LTBQ06643 244 aa13.17□□□□□ -0.3
TNF-208ENST00000449264 SLC36A3Q495N2 470 aa13.17□□□□□ -0.3
TNF-208ENST00000449264 CMPK2Q5EBM0 449 aa13.17□□□□□ -0.3
TNF-208ENST00000449264 OAFQ86UD1 273 aa13.17□□□□□ -0.3
TNF-208ENST00000449264 OR51A7Q8NH64 312 aa13.17□□□□□ -0.3
TNF-208ENST00000449264 DNAJC9Q8WXX5 260 aa13.17□□□□□ -0.3
TNF-208ENST00000449264 KLHL15Q96M94 604 aa13.17□□□□□ -0.3
TNF-208ENST00000449264 ZNF184Q99676 751 aaPredicted RBP13.17□□□□□ -0.3
TNF-208ENST00000449264 EGLN3Q9H6Z9 239 aa13.17□□□□□ -0.3
TNF-208ENST00000449264 ACKR4Q9NPB9 350 aa13.17□□□□□ -0.3
TNF-208ENST00000449264 TNFRSF10DQ9UBN6 386 aa13.17□□□□□ -0.3
TNF-208ENST00000449264 NPIPA1Q9UND3 350 aa13.17□□□□□ -0.3
TNF-208ENST00000449264 GJE1A6NN92 205 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 H0YC42 278 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 DLGAP1O14490 977 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 EIF1AYO14602 144 aaKnown RBP13.16□□□□□ -0.3
TNF-208ENST00000449264 TNFSF11O14788 317 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 OR2T1O43869 369 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 IGF2P01344 180 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 IMPDH2P12268 514 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 CHMP24386 653 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 TPD52P55327 224 aaPredicted RBP13.16□□□□□ -0.3
TNF-208ENST00000449264 NUP107P57740 925 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 FOXK2Q01167 660 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms