RNA–Protein interactions for RNA: ENST00000449174.1

COPS7B-213, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-213ENST00000449174 USF1P22415 310 aaPredicted RBP10.19□□□□□ -0.78
COPS7B-213ENST00000449174 TACR3P29371 465 aa10.19□□□□□ -0.78
COPS7B-213ENST00000449174 S100A3P33764 101 aa10.19□□□□□ -0.78
COPS7B-213ENST00000449174 NTF4P34130 210 aa10.19□□□□□ -0.78
COPS7B-213ENST00000449174 GZMKP49863 264 aa10.19□□□□□ -0.78
COPS7B-213ENST00000449174 RPL14P50914 215 aaKnown RBP10.19□□□□□ -0.78
COPS7B-213ENST00000449174 ABCE1P61221 599 aaKnown RBP10.19□□□□□ -0.78
COPS7B-213ENST00000449174 B3GLCTQ6Y288 498 aa10.19□□□□□ -0.78
COPS7B-213ENST00000449174 LRRC74BQ6ZQY2 392 aa10.19□□□□□ -0.78
COPS7B-213ENST00000449174 OLIG3Q7RTU3 272 aa10.19□□□□□ -0.78
COPS7B-213ENST00000449174 ANKRD46Q86W74 232 aa10.19□□□□□ -0.78
COPS7B-213ENST00000449174 ZNF781Q8N8C0 355 aa10.19□□□□□ -0.78
COPS7B-213ENST00000449174 WDR31Q8NA23 367 aa10.19□□□□□ -0.78
COPS7B-213ENST00000449174 OR52E4Q8NGH9 312 aa10.19□□□□□ -0.78
COPS7B-213ENST00000449174 WDR60Q8WVS4 1066 aa10.19□□□□□ -0.78
COPS7B-213ENST00000449174 ZG16BQ96DA0 208 aa10.19□□□□□ -0.78
COPS7B-213ENST00000449174 CCDC115Q96NT0 180 aa10.19□□□□□ -0.78
COPS7B-213ENST00000449174 ZNF317Q96PQ6 595 aaPredicted RBP10.19□□□□□ -0.78
COPS7B-213ENST00000449174 TMEM109Q9BVC6 243 aa10.19□□□□□ -0.78
COPS7B-213ENST00000449174 SHARPINQ9H0F6 387 aa10.19□□□□□ -0.78
COPS7B-213ENST00000449174 MTHFD2LQ9H903 347 aaPredicted RBP10.19□□□□□ -0.78
COPS7B-213ENST00000449174 SSU72Q9NP77 194 aaKnown RBP10.19□□□□□ -0.78
COPS7B-213ENST00000449174 SLC7A10Q9NS82 523 aa10.19□□□□□ -0.78
COPS7B-213ENST00000449174 OSGIN1Q9UJX0 560 aa10.19□□□□□ -0.78
COPS7B-213ENST00000449174 PRR14LQ5THK1 2151 aa10.19□□□□□ -0.78
COPS7B-213ENST00000449174 ATRQ13535 2644 aa10.18□□□□□ -0.78
COPS7B-213ENST00000449174 TMEM72A0PK05 275 aa10.18□□□□□ -0.78
COPS7B-213ENST00000449174 OR6C65A6NJZ3 312 aa10.18□□□□□ -0.78
COPS7B-213ENST00000449174 TM9SF1O15321 606 aa10.18□□□□□ -0.78
COPS7B-213ENST00000449174 IMPDH2P12268 514 aa10.18□□□□□ -0.78
COPS7B-213ENST00000449174 IL7RP16871 459 aa10.18□□□□□ -0.78
COPS7B-213ENST00000449174 CCNA2P20248 432 aa10.18□□□□□ -0.78
COPS7B-213ENST00000449174 RPS4Y1P22090 263 aaKnown RBP10.18□□□□□ -0.78
COPS7B-213ENST00000449174 PDLIM4P50479 330 aa10.18□□□□□ -0.78
COPS7B-213ENST00000449174 SNRPD2P62316 118 aaKnown RBP10.18□□□□□ -0.78
COPS7B-213ENST00000449174 LSM11P83369 360 aaKnown RBP eCLIP10.18□□□□□ -0.782e-6■■■■□ 23.2
COPS7B-213ENST00000449174 PLAURQ03405 335 aa10.18□□□□□ -0.78
COPS7B-213ENST00000449174 CHI3L2Q15782 390 aa10.18□□□□□ -0.78
COPS7B-213ENST00000449174 ZSWIM7Q19AV6 140 aa10.18□□□□□ -0.78
COPS7B-213ENST00000449174 FAM174BQ3ZCQ3 159 aa10.18□□□□□ -0.78
COPS7B-213ENST00000449174 SPANXN4Q5MJ08 99 aa10.18□□□□□ -0.78
COPS7B-213ENST00000449174 OTUD3Q5T2D3 398 aaPredicted RBP10.18□□□□□ -0.78
COPS7B-213ENST00000449174 TSPO2Q5TGU0 170 aa10.18□□□□□ -0.78
COPS7B-213ENST00000449174 OGFOD2Q6N063 350 aa10.18□□□□□ -0.78
COPS7B-213ENST00000449174 CNOT9Q92600 299 aaKnown RBP10.18□□□□□ -0.78
COPS7B-213ENST00000449174 PANX1Q96RD7 426 aa10.18□□□□□ -0.78
COPS7B-213ENST00000449174 PIMREGQ9BSJ6 248 aa10.18□□□□□ -0.78
COPS7B-213ENST00000449174 SLC38A1Q9H2H9 487 aa10.18□□□□□ -0.78
COPS7B-213ENST00000449174 MANSC1Q9H8J5 431 aa10.18□□□□□ -0.78
COPS7B-213ENST00000449174 HAO1Q9UJM8 370 aa10.18□□□□□ -0.78
COPS7B-213ENST00000449174 A0A096LPI6 279 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 PRAMEF27A3QJZ7 478 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 CCDC154A6NI56 674 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 AQP7P3A6NL99 342 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 CLDN24A6NM45 220 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 ATP6V1G2-DDX39BF2Z307 99 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 AP3D1O14617 1153 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 ITM2AO43736 263 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 LMX1BO60663 402 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 PDE5AO76074 875 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 VAMP5O95183 116 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 IGHV4-31P0DP07 118 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 CREB1P16220 341 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 CXCR1P25024 350 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 SLC1A6P48664 564 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 FOXG1P55316 489 aaPredicted RBP10.17□□□□□ -0.78
COPS7B-213ENST00000449174 EPS8Q12929 822 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 SYPL1Q16563 259 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 SWI5Q1ZZU3 235 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 C3orf36Q3SXR2 165 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 C9orf135Q5VTT2 229 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 AAED1Q7RTV5 226 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 RNF130Q86XS8 419 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 PEX5LQ8IYB4 626 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 ANKFN1Q8N957 763 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 OR9K2Q8NGE7 335 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 NANOS1Q8WY41 292 aaKnown RBP10.17□□□□□ -0.78
COPS7B-213ENST00000449174 DNAJA3Q96EY1 480 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 PPP1R36Q96LQ0 422 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 KCNS3Q9BQ31 491 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 KATNB1Q9BVA0 655 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 TAPBPLQ9BX59 468 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 C1QTNF6Q9BXI9 259 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 ADAM19Q9H013 955 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 MEAF6Q9HAF1 191 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 TMEM45AQ9NWC5 275 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 CALML5Q9NZT1 146 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 KCNS2Q9ULS6 477 aa10.17□□□□□ -0.78
COPS7B-213ENST00000449174 NUP214P35658 2090 aaPredicted RBP10.17□□□□□ -0.78
COPS7B-213ENST00000449174 ABCA1O95477 2261 aa10.16□□□□□ -0.78
COPS7B-213ENST00000449174 LOC390937A0A1W2PQ73 354 aa10.16□□□□□ -0.78
COPS7B-213ENST00000449174 WDR91A4D1P6 747 aa10.16□□□□□ -0.78
COPS7B-213ENST00000449174 CDHR4A6H8M9 788 aa10.16□□□□□ -0.78
COPS7B-213ENST00000449174 LIPT2A6NK58 231 aa10.16□□□□□ -0.78
COPS7B-213ENST00000449174 A8MVM7 634 aa10.16□□□□□ -0.78
COPS7B-213ENST00000449174 VWC2LB2RUY7 222 aa10.16□□□□□ -0.78
COPS7B-213ENST00000449174 ZNF587BE7ETH6 402 aa10.16□□□□□ -0.78
COPS7B-213ENST00000449174 KRT33AO76009 404 aa10.16□□□□□ -0.78
COPS7B-213ENST00000449174 KRT75O95678 551 aa10.16□□□□□ -0.78
COPS7B-213ENST00000449174 CRYAAP02489 173 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms