RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 CRB3Q9BUF7 120 aa8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 HDHD5Q9BXW7 423 aa8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 EXOSC3Q9NQT5 275 aaKnown RBP8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 CCDC59Q9P031 241 aaKnown RBP8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 CHRNA9Q9UGM1 479 aa8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 IGLV3-12A0A075B6K2 115 aa8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 CCDC182A6NF36 153 aa8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 MEN1O00255 615 aa8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 TO15178 435 aa8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 RGS5O15539 181 aa8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 CDC40O60508 579 aaKnown RBP eCLIP8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 SYPP08247 313 aa8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 CXCR1P25024 350 aa8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 EVI2BP34910 448 aa8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 RPS5P46782 204 aaKnown RBP8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 HCCSP53701 268 aa8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 PNLIPRP2P54317 469 aa8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 TPBGQ13641 420 aa8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 TCEAL6Q6IPX3 200 aa8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 PAPD4Q6PIY7 484 aaKnown RBP8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 DPY19L2P2Q6ZN68 376 aa8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 LINC00299Q6ZSB3 139 aa8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 MFSD4AQ8N468 514 aa8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 TCEAL3Q969E4 200 aa8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 KISS1RQ969F8 398 aaPredicted RBP8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 ZMYND19Q96E35 227 aaPredicted RBP8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 KTI12Q96EK9 354 aaPredicted RBP8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 ZNF649Q9BS31 505 aa8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 KATNB1Q9BVA0 655 aa8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 TTTY10Q9BZA0 68 aa8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 FRYLO94915 3013 aa8.69□□□□□ -1.02
COL6A4P1-201ENST00000446690 TRBV11-1A0A0K0K1C0 115 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 ALG1L2C9J202 215 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 ZNF670-ZNF695F2Z2N8 137 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 J3QRE1 110 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 CTDSP2O14595 271 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 IMPA2O14732 288 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 AKAP8O43823 692 aaKnown RBP8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 F13BP05160 661 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 SLC6A8P48029 635 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 RORCP51449 518 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 DUSP3P51452 185 aaPredicted RBP8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 FBXW4P57775 412 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 FABP5Q01469 135 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 EGR4Q05215 589 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 ZNF74Q16587 644 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 CCDC157Q569K6 752 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 PEAR1Q5VY43 1037 aaPredicted RBP8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 ZNF441Q8N8Z8 693 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 DTWD2Q8NBA8 298 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 ZNF485Q8NCK3 441 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 APCDD1LQ8NCL9 501 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 ATP6V1C2Q8NEY4 427 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 SMPDL3BQ92485 455 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 PMEPA1Q969W9 287 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 TP53INP1Q96A56 240 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 RASD2Q96D21 266 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 CEP19Q96LK0 163 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 LPAR4Q99677 370 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 SLC19A3Q9BZV2 496 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 B3GNT3Q9Y2A9 372 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 NPFFR2Q9Y5X5 522 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 SEC16AO15027 2179 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 SAGE2PA6NJ88 616 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 C4orf47A7E2U8 309 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 FAM171A2A8MVW0 826 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 J3QLW9 94 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 M0R296 226 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 WISP1O95388 367 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 HIST1H2ABP04908 130 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 SBK2P0C263 348 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 CLEC2LP0C7M8 214 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 GP1BBP13224 206 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 CCL4P13236 92 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 ZNF19P17023 458 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 ZNF28P17035 718 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 GABRA5P31644 462 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 PRPS1P60891 318 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 CBFBQ13951 182 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 INSL4Q14641 139 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 SLC23A3Q6PIS1 610 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 HIST3H2AQ7L7L0 130 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 CPEB2Q7Z5Q1 589 aaKnown RBP8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 OR52N1Q8NH53 320 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 OIT3Q8WWZ8 545 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 HIST1H2ACQ93077 130 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 TAAR8Q969N4 342 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 SLC25A36Q96CQ1 311 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 KCTD7Q96MP8 289 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 TMEM43Q9BTV4 400 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 BARHL1Q9BZE3 327 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 NXF2Q9GZY0 626 aaKnown RBP8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 MARCH7Q9H992 704 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 ADGRL4Q9HBW9 690 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 ISYNA1Q9NPH2 558 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 ABCB10Q9NRK6 738 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 WDR70Q9NW82 654 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 BABAM2Q9NXR7 383 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 QPCTLQ9NXS2 382 aa8.68□□□□□ -1.02
COL6A4P1-201ENST00000446690 KLHL21Q9UJP4 597 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms