RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 RNF220Q5VTB9 566 aa7.95□□□□□ -1.14
PTPN3-204ENST00000446349 PAQR9Q6ZVX9 377 aa7.95□□□□□ -1.14
PTPN3-204ENST00000446349 GALNT10Q86SR1 603 aa7.95□□□□□ -1.14
PTPN3-204ENST00000446349 OR5D16Q8NGK9 328 aa7.95□□□□□ -1.14
PTPN3-204ENST00000446349 OR6F1Q8NGZ6 308 aa7.95□□□□□ -1.14
PTPN3-204ENST00000446349 KCMF1Q9P0J7 381 aa7.95□□□□□ -1.14
PTPN3-204ENST00000446349 ZNF346Q9UL40 294 aaKnown RBP7.95□□□□□ -1.14
PTPN3-204ENST00000446349 ZNF281Q9Y2X9 895 aa7.95□□□□□ -1.14
PTPN3-204ENST00000446349 NOVA1P51513 510 aaKnown RBP7.94□□□□□ -1.14
PTPN3-204ENST00000446349 RAB11AP62491 216 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 MBOAT2Q6ZWT7 520 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 CPOQ8IVL8 374 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 OR51A2Q8NGJ7 313 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 NETO1Q8TDF5 533 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 LINC00615Q96LM1 132 aaPredicted RBP7.94□□□□□ -1.14
PTPN3-204ENST00000446349 ZNF285Q96NJ3 590 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 MUTYHQ9UIF7 546 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 SLC16A7O60669 478 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 MPIG6BO95866 241 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 HMGA1P17096 107 aaKnown RBP7.94□□□□□ -1.14
PTPN3-204ENST00000446349 SGSHP51688 502 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 SUMO3P55854 103 aaPredicted RBP7.94□□□□□ -1.14
PTPN3-204ENST00000446349 WDR5BQ86VZ2 330 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 ZNF687Q8N1G0 1237 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 OR52D1Q9H346 318 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 V9GY05 133 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 KIAA0513O60268 411 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 ABHD16AO95870 558 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 PLATP00750 562 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 MAOBP27338 520 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 BCL6P41182 706 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 CHRNEQ04844 493 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 SELENBP1Q13228 472 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 KIAA1211LQ6NV74 962 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 CHDHQ8NE62 594 aaPredicted RBP7.94□□□□□ -1.14
PTPN3-204ENST00000446349 OR1S1Q8NH92 325 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 SLC25A44Q96H78 314 aaPredicted RBP7.94□□□□□ -1.14
PTPN3-204ENST00000446349 WDR76Q9H967 626 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 ZNF226Q9NYT6 803 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 PMF1-BGLAPU3KQ54 211 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 TMEM269A0A1B0GVZ9 245 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 OR1D5P58170 312 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 ARF1P84077 181 aaKnown RBP7.94□□□□□ -1.14
PTPN3-204ENST00000446349 GLYATL2Q8WU03 294 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 MYLIPQ8WY64 445 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 POLDIP2Q9Y2S7 368 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 TDRD15B5MCY1 1934 aaKnown RBP7.94□□□□□ -1.14
PTPN3-204ENST00000446349 ZNFX1Q9P2E3 1918 aaKnown RBP7.94□□□□□ -1.14
PTPN3-204ENST00000446349 LOC100509620A0A075B734 347 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 FURINP09958 794 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 GPX3P22352 226 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 MBTPS1Q14703 1052 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 CMPK2Q5EBM0 449 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 CCSAPQ6IQ19 270 aaPredicted RBP7.94□□□□□ -1.14
PTPN3-204ENST00000446349 MOB3CQ70IA8 216 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 CISD2Q8N5K1 135 aaKnown RBP7.94□□□□□ -1.14
PTPN3-204ENST00000446349 OR5J2Q8NH18 312 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 POC1BQ8TC44 478 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 TECTBQ96PL2 329 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 OCSTAMPQ9BR26 566 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 CD8B2A6NJW9 211 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 SNAP29O95721 258 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 AMY2AP04746 511 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 F7P08709 466 aaPredicted RBP7.94□□□□□ -1.14
PTPN3-204ENST00000446349 CD8BP10966 210 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 ACP2P11117 423 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 IVDP26440 423 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 TAS2R19P59542 299 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 METAP1DQ6UB28 335 aaPredicted RBP7.94□□□□□ -1.14
PTPN3-204ENST00000446349 SULF2Q8IWU5 870 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 OR14K1Q8NGZ2 314 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 SLC35A4Q96G79 324 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 FBXL20Q96IG2 436 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 BTF3L4Q96K17 158 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 HINT2Q9BX68 163 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 PLXNB2O15031 1838 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 MIA3Q5JRA6 1907 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 TMED7-TICAM2A0A0A6YYA0 188 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 M0R3H8 397 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 SC5DO75845 299 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 CNOT4O95628 575 aaKnown RBP7.94□□□□□ -1.14
PTPN3-204ENST00000446349 RBMS3Q6XE24 437 aaKnown RBP7.94□□□□□ -1.14
PTPN3-204ENST00000446349 OIT3Q8WWZ8 545 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 ZBTB8AQ96BR9 441 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 C12orf43Q96C57 262 aaKnown RBP7.94□□□□□ -1.14
PTPN3-204ENST00000446349 CPPED1Q9BRF8 314 aaPredicted RBP7.94□□□□□ -1.14
PTPN3-204ENST00000446349 UBQLN2Q9UHD9 624 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 TMED7Q9Y3B3 224 aa7.94□□□□□ -1.14
PTPN3-204ENST00000446349 A0A1W2PPC1 479 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 F5H0A9 414 aaPredicted RBP7.93□□□□□ -1.14
PTPN3-204ENST00000446349 GABARAPH6UMI1 98 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 GABARAPO95166 117 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 IGLV3-27P01718 113 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 STSP08842 583 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 GABRR1P24046 479 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 PODNL1Q6PEZ8 512 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 GPBAR1Q8TDU6 330 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 LRRC15Q8TF66 581 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 TTC9Q92623 222 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 SHISA4Q96DD7 197 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms