RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 CHERPQ8IWX8 916 aaKnown RBP13.59□□□□□ -0.23
CCNE1-203ENST00000444983 CISD2Q8N5K1 135 aaKnown RBP13.59□□□□□ -0.23
CCNE1-203ENST00000444983 FAR1Q8WVX9 515 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 SNRNP40Q96DI7 357 aaKnown RBP13.59□□□□□ -0.23
CCNE1-203ENST00000444983 BPIFA2Q96DR5 249 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 TIMP4Q99727 224 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 NIPSNAP1Q9BPW8 284 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 TMEM185BQ9H7F4 350 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 SPRR3Q9UBC9 169 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 HDGFL3Q9Y3E1 203 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 KALRNO60229 2985 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 NPIPA5E9PKD4 350 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 KPNA4O00629 521 aaPredicted RBP13.59□□□□□ -0.23
CCNE1-203ENST00000444983 SOCS2O14508 198 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 AQP7O14520 342 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 CDC42EP2O14613 210 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 BGLAPP02818 100 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 OPN1LWP04000 364 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 IMPDH2P12268 514 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 IFI30P13284 250 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 ANXA8P13928 327 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 RPS5P46782 204 aaKnown RBP13.59□□□□□ -0.23
CCNE1-203ENST00000444983 GSSP48637 474 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 DAPP51397 102 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 MYBPHQ13203 477 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 FHL1Q13642 323 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 ZNF74Q16587 644 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 FAM69AQ5T7M9 428 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 KDM4DQ6B0I6 523 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 PPP4R4Q6NUP7 873 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 FAM180AQ6UWF9 173 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 CD300LDQ6UXZ3 194 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 RRM2BQ7LG56 351 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 CBR4Q8N4T8 237 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 AQP11Q8NBQ7 271 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 PIGXQ8TBF5 258 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 ABTB1Q969K4 478 aaPredicted RBP13.59□□□□□ -0.23
CCNE1-203ENST00000444983 MIB2Q96AX9 1013 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 EME1Q96AY2 570 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 FAM46AQ96IP4 442 aaKnown RBP13.59□□□□□ -0.23
CCNE1-203ENST00000444983 GPR137Q96N19 417 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 MOGAT1Q96PD6 335 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 SLX1AQ9BQ83 275 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 C9orf16Q9BUW7 83 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 COQ10BQ9H8M1 238 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 TMEFF2Q9UIK5 374 aaPredicted RBP13.59□□□□□ -0.23
CCNE1-203ENST00000444983 NPIPA1Q9UND3 350 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 MGAT4BQ9UQ53 548 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 TRAPPC4Q9Y296 219 aa13.59□□□□□ -0.23
CCNE1-203ENST00000444983 A0A0J9YW62 118 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 LIPT2A6NK58 231 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 GJE1A6NN92 205 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 ENO4A6NNW6 628 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 LRRN3E7EW58 273 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 H0YC42 278 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 OR2T1O43869 369 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 ADAP00813 363 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 ALPLP05186 524 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 TSPAN19P0C672 248 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 ASAH2BP0C7U1 165 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 CPN1P15169 458 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 SFTPDP35247 375 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 IFNGR2P38484 337 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 PTDSS1P48651 473 aaKnown RBP13.58□□□□□ -0.24
CCNE1-203ENST00000444983 TPD52P55327 224 aaPredicted RBP13.58□□□□□ -0.24
CCNE1-203ENST00000444983 KRTCAP3Q53RY4 240 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 OTUD3Q5T2D3 398 aaPredicted RBP13.58□□□□□ -0.24
CCNE1-203ENST00000444983 ZBTB49Q6ZSB9 765 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 TMPPEQ6ZT21 453 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 ESPNLQ6ZVH7 1005 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 LSM14AQ8ND56 463 aaKnown RBP13.58□□□□□ -0.24
CCNE1-203ENST00000444983 ATP6V1C2Q8NEY4 427 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 MFSD8Q8NHS3 518 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 KLHL15Q96M94 604 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 RASSF4Q9H2L5 321 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 LDAHQ9H6V9 325 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 SMURF2Q9HAU4 748 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 USE1Q9NZ43 259 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 TMEM5Q9Y2B1 443 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 ZFYVE26Q68DK2 2539 aa13.58□□□□□ -0.24
CCNE1-203ENST00000444983 A0A1W2PNR3 127 aa13.57□□□□□ -0.24
CCNE1-203ENST00000444983 EI24O14681 340 aa13.57□□□□□ -0.24
CCNE1-203ENST00000444983 PMS2P2O95744 297 aa13.57□□□□□ -0.24
CCNE1-203ENST00000444983 MT-ATP6P00846 226 aa13.57□□□□□ -0.24
CCNE1-203ENST00000444983 POU3F2P20265 443 aaPredicted RBP13.57□□□□□ -0.24
CCNE1-203ENST00000444983 FPR3P25089 353 aa13.57□□□□□ -0.24
CCNE1-203ENST00000444983 ALDH3A2P51648 485 aa13.57□□□□□ -0.24
CCNE1-203ENST00000444983 H3F3AP84243 136 aa13.57□□□□□ -0.24
CCNE1-203ENST00000444983 TSPAN31Q12999 210 aa13.57□□□□□ -0.24
CCNE1-203ENST00000444983 PRR30Q53SZ7 412 aaPredicted RBP13.57□□□□□ -0.24
CCNE1-203ENST00000444983 FGD2Q7Z6J4 655 aa13.57□□□□□ -0.24
CCNE1-203ENST00000444983 MEX3DQ86XN8 651 aaKnown RBP13.57□□□□□ -0.24
CCNE1-203ENST00000444983 LRRC17Q8N6Y2 441 aa13.57□□□□□ -0.24
CCNE1-203ENST00000444983 SGTBQ96EQ0 304 aa13.57□□□□□ -0.24
CCNE1-203ENST00000444983 RBM4BQ9BQ04 359 aaKnown RBP13.57□□□□□ -0.24
CCNE1-203ENST00000444983 RBM4Q9BWF3 364 aaKnown RBP13.57□□□□□ -0.24
CCNE1-203ENST00000444983 SMG1Q96Q15 3661 aaKnown RBP13.57□□□□□ -0.24
CCNE1-203ENST00000444983 CFAP46Q8IYW2 2715 aa13.57□□□□□ -0.24
CCNE1-203ENST00000444983 SVILO95425 2214 aa13.57□□□□□ -0.24
CCNE1-203ENST00000444983 ATXN7O15265 892 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms