RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 SUCLG1P53597 346 aaKnown RBP15.47■□□□□ 0.07
LIME1-202ENST00000444951 SMIM11AP58511 58 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 SYT14P1Q58G82 188 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 PPP4R4Q6NUP7 873 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 TBPL2Q6SJ96 375 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 ZNF730Q6ZMV8 503 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 FGD2Q7Z6J4 655 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 AMIGO2Q86SJ2 522 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 C10orf53Q8N6V4 93 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 LRTOMTQ8WZ04 291 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 SARAFQ96BY9 339 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 DUS3LQ96G46 650 aaKnown RBP15.47■□□□□ 0.07
LIME1-202ENST00000444951 MPP4Q96JB8 637 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 KLHL15Q96M94 604 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 REEP1Q9H902 201 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 C12orf10Q9HB07 376 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 S100A14Q9HCY8 104 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 PLSCR2Q9NRY7 297 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 ARMC1Q9NVT9 282 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 PRDM4Q9UKN5 801 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 TMCC3Q9ULS5 477 aa15.47■□□□□ 0.07
LIME1-202ENST00000444951 SAMHD1Q9Y3Z3 626 aaKnown RBP15.47■□□□□ 0.07
LIME1-202ENST00000444951 TEP1Q99973 2627 aaKnown RBP15.47■□□□□ 0.07
LIME1-202ENST00000444951 IGKV1D-42A0A075B6H8 117 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 A0A0J9YW62 118 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 GJE1A6NN92 205 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 A8MVM7 634 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 H0Y3Z8 333 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 H3BNX3 289 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 ADAMDEC1O15204 470 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 CLOCKO15516 846 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 E2F6O75461 281 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 BAG2O95816 211 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 TPOP07202 933 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 FASP25445 335 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 CA7P43166 264 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 RPS5P46782 204 aaKnown RBP15.46■□□□□ 0.07
LIME1-202ENST00000444951 EIF1AXP47813 144 aaKnown RBP15.46■□□□□ 0.07
LIME1-202ENST00000444951 IST1P53990 364 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 UGT2B15P54855 530 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 LSM11P83369 360 aaKnown RBP eCLIP15.46■□□□□ 0.07
LIME1-202ENST00000444951 LAPTM4AQ15012 233 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 EXOC3L2Q2M3D2 409 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 NHSL2Q5HYW2 709 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 C1orf140Q5VVS0 124 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 ZFP1Q6P2D0 407 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 PODNL1Q6PEZ8 512 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 RRM2BQ7LG56 351 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 GGNQ86UU5 652 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 MEX3DQ86XN8 651 aaKnown RBP15.46■□□□□ 0.07
LIME1-202ENST00000444951 MEIOBQ8N635 442 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 PFN4Q8NHR9 129 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 SLC25A43Q8WUT9 341 aaPredicted RBP15.46■□□□□ 0.07
LIME1-202ENST00000444951 TMEM239Q8WW34 195 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 KTI12Q96EK9 354 aaPredicted RBP15.46■□□□□ 0.07
LIME1-202ENST00000444951 ARL5BQ96KC2 179 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 ALPK1Q96QP1 1244 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 SEMA6AQ9H2E6 1030 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 DNAJB9Q9UBS3 223 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 NCOA6Q14686 2063 aaPredicted RBP15.46■□□□□ 0.07
LIME1-202ENST00000444951 PDZD2O15018 2839 aa15.46■□□□□ 0.07
LIME1-202ENST00000444951 A0A1W2PRQ8 180 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 ENO4A6NNW6 628 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 CCL21O00585 134 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 ZNF208O43345 1280 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 DEAF1O75398 565 aaPredicted RBP15.45■□□□□ 0.06
LIME1-202ENST00000444951 AHSA1O95433 338 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 CLDN18P56856 261 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 OR2B6P58173 313 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 EGR4Q05215 589 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 MYBPHQ13203 477 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 DGCR6Q14129 220 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 SEC23BQ15437 767 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 WLSQ5T9L3 541 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 HBMQ6B0K9 141 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 ZNF585AQ6P3V2 769 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 LINC00114Q6XXX2 140 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 CHERPQ8IWX8 916 aaKnown RBP15.45■□□□□ 0.06
LIME1-202ENST00000444951 MCEMP1Q8IX19 187 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 SLC7A13Q8TCU3 470 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 SLC25A36Q96CQ1 311 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 WDYHV1Q96HA8 205 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 HS6ST2Q96MM7 605 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 PKP2Q99959 881 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 PNPLA3Q9NST1 481 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 MED31Q9Y3C7 131 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 LYVE1Q9Y5Y7 322 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 MED12Q93074 2177 aa15.45■□□□□ 0.06
LIME1-202ENST00000444951 ADGRG4Q8IZF6 3080 aa15.44■□□□□ 0.06
LIME1-202ENST00000444951 A0A087WUU8 490 aa15.44■□□□□ 0.06
LIME1-202ENST00000444951 SULT2B1O00204 365 aa15.44■□□□□ 0.06
LIME1-202ENST00000444951 CXCL13O43927 109 aa15.44■□□□□ 0.06
LIME1-202ENST00000444951 FCGR1AP12314 374 aa15.44■□□□□ 0.06
LIME1-202ENST00000444951 ZNF708P17019 499 aa15.44■□□□□ 0.06
LIME1-202ENST00000444951 IDUAP35475 653 aa15.44■□□□□ 0.06
LIME1-202ENST00000444951 RBM34P42696 430 aaKnown RBP15.44■□□□□ 0.06
LIME1-202ENST00000444951 CLDN15P56746 228 aa15.44■□□□□ 0.06
LIME1-202ENST00000444951 ADORA2A-AS1P86434 159 aa15.44■□□□□ 0.06
LIME1-202ENST00000444951 RBPJQ06330 500 aa15.44■□□□□ 0.06
LIME1-202ENST00000444951 CDSNQ15517 529 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms