RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 CRATP43155 626 aa18.5■□□□□ 0.55
VSX1-206ENST00000444511 FOXG1P55316 489 aaPredicted RBP18.5■□□□□ 0.55
VSX1-206ENST00000444511 DMTNQ08495 405 aa18.5■□□□□ 0.55
VSX1-206ENST00000444511 SLC17A1Q14916 467 aa18.5■□□□□ 0.55
VSX1-206ENST00000444511 GSTA3Q16772 222 aa18.5■□□□□ 0.55
VSX1-206ENST00000444511 LIN52Q52LA3 116 aa18.5■□□□□ 0.55
VSX1-206ENST00000444511 PAQR6Q6TCH4 344 aa18.5■□□□□ 0.55
VSX1-206ENST00000444511 LSRQ86X29 649 aaPredicted RBP18.5■□□□□ 0.55
VSX1-206ENST00000444511 DEPDC4Q8N2C3 294 aa18.5■□□□□ 0.55
VSX1-206ENST00000444511 OR52P1PQ8NH57 321 aa18.5■□□□□ 0.55
VSX1-206ENST00000444511 MUS81Q96NY9 551 aa18.5■□□□□ 0.55
VSX1-206ENST00000444511 SLC6A13Q9NSD5 602 aa18.5■□□□□ 0.55
VSX1-206ENST00000444511 RLIMQ9NVW2 624 aa18.5■□□□□ 0.55
VSX1-206ENST00000444511 CALML5Q9NZT1 146 aa18.5■□□□□ 0.55
VSX1-206ENST00000444511 ZANQ9Y493 2812 aa18.49■□□□□ 0.55
VSX1-206ENST00000444511 CDHR4A6H8M9 788 aa18.49■□□□□ 0.55
VSX1-206ENST00000444511 KIAA1324LA8MWY0 1029 aaPredicted RBP18.49■□□□□ 0.55
VSX1-206ENST00000444511 TP53P04637 393 aaPredicted RBP18.49■□□□□ 0.55
VSX1-206ENST00000444511 BCHEP06276 602 aa18.49■□□□□ 0.55
VSX1-206ENST00000444511 GPIP06744 558 aa18.49■□□□□ 0.55
VSX1-206ENST00000444511 THBS1P07996 1170 aa18.49■□□□□ 0.55
VSX1-206ENST00000444511 GKN3PP0CG01 181 aa18.49■□□□□ 0.55
VSX1-206ENST00000444511 ETFAP13804 333 aa18.49■□□□□ 0.55
VSX1-206ENST00000444511 CD40P25942 277 aa18.49■□□□□ 0.55
VSX1-206ENST00000444511 CRISP3P54108 245 aa18.49■□□□□ 0.55
VSX1-206ENST00000444511 COPZ1P61923 177 aa18.49■□□□□ 0.55
VSX1-206ENST00000444511 KRTAP1-1Q07627 177 aa18.49■□□□□ 0.55
VSX1-206ENST00000444511 SPOCK1Q08629 439 aa18.49■□□□□ 0.55
VSX1-206ENST00000444511 NRF1Q16656 503 aa18.49■□□□□ 0.55
VSX1-206ENST00000444511 OTUD3Q5T2D3 398 aaPredicted RBP18.49■□□□□ 0.55
VSX1-206ENST00000444511 C9orf135Q5VTT2 229 aa18.49■□□□□ 0.55
VSX1-206ENST00000444511 VRK2Q86Y07 508 aa18.49■□□□□ 0.55
VSX1-206ENST00000444511 C1QTNF6Q9BXI9 259 aa18.49■□□□□ 0.55
VSX1-206ENST00000444511 ADAM19Q9H013 955 aa18.49■□□□□ 0.55
VSX1-206ENST00000444511 RMND5AQ9H871 391 aa18.49■□□□□ 0.55
VSX1-206ENST00000444511 CACYBPQ9HB71 228 aaKnown RBP18.49■□□□□ 0.55
VSX1-206ENST00000444511 SLC7A10Q9NS82 523 aa18.49■□□□□ 0.55
VSX1-206ENST00000444511 NKIRAS1Q9NYS0 192 aa18.49■□□□□ 0.55
VSX1-206ENST00000444511 DCTN4Q9UJW0 460 aa18.49■□□□□ 0.55
VSX1-206ENST00000444511 B3GALT5Q9Y2C3 310 aa18.49■□□□□ 0.55
VSX1-206ENST00000444511 E7EQL1 145 aa18.48■□□□□ 0.55
VSX1-206ENST00000444511 TTKP33981 857 aa18.48■□□□□ 0.55
VSX1-206ENST00000444511 MVDP53602 400 aa18.48■□□□□ 0.55
VSX1-206ENST00000444511 DSTNP60981 165 aa18.48■□□□□ 0.55
VSX1-206ENST00000444511 TGFBR3Q03167 851 aa18.48■□□□□ 0.55
VSX1-206ENST00000444511 CEACAM7Q14002 265 aa18.48■□□□□ 0.55
VSX1-206ENST00000444511 OR7A5Q15622 319 aa18.48■□□□□ 0.55
VSX1-206ENST00000444511 MAPK11Q15759 364 aa18.48■□□□□ 0.55
VSX1-206ENST00000444511 SLC9B1Q4ZJI4 515 aa18.48■□□□□ 0.55
VSX1-206ENST00000444511 TSPO2Q5TGU0 170 aa18.48■□□□□ 0.55
VSX1-206ENST00000444511 ZNF836Q6ZNA1 936 aa18.48■□□□□ 0.55
VSX1-206ENST00000444511 CADM2Q8N3J6 435 aa18.48■□□□□ 0.55
VSX1-206ENST00000444511 C17orf78Q8N4C9 275 aa18.48■□□□□ 0.55
VSX1-206ENST00000444511 ITCHQ96J02 903 aa18.48■□□□□ 0.55
VSX1-206ENST00000444511 MAELQ96JY0 434 aaKnown RBP18.48■□□□□ 0.55
VSX1-206ENST00000444511 ADAD1Q96M93 576 aaKnown RBP18.48■□□□□ 0.55
VSX1-206ENST00000444511 DHRS9Q9BPW9 319 aa18.48■□□□□ 0.55
VSX1-206ENST00000444511 CACNG6Q9BXT2 260 aa18.48■□□□□ 0.55
VSX1-206ENST00000444511 MANSC1Q9H8J5 431 aa18.48■□□□□ 0.55
VSX1-206ENST00000444511 TPT1P8Q9HAU6 139 aa18.48■□□□□ 0.55
VSX1-206ENST00000444511 ZIM2Q9NZV7 527 aa18.48■□□□□ 0.55
VSX1-206ENST00000444511 PRDM4Q9UKN5 801 aa18.48■□□□□ 0.55
VSX1-206ENST00000444511 JMJD1CQ15652 2540 aa18.48■□□□□ 0.55
VSX1-206ENST00000444511 DSPPQ9NZW4 1301 aa18.48■□□□□ 0.55
VSX1-206ENST00000444511 TMEM247A6NEH6 219 aa18.47■□□□□ 0.55
VSX1-206ENST00000444511 LIPT2A6NK58 231 aa18.47■□□□□ 0.55
VSX1-206ENST00000444511 PDLIM1O00151 329 aa18.47■□□□□ 0.55
VSX1-206ENST00000444511 SSX4O60224 188 aa18.47■□□□□ 0.55
VSX1-206ENST00000444511 AKR7A3O95154 331 aa18.47■□□□□ 0.55
VSX1-206ENST00000444511 ZCCHC18P0CG32 403 aa18.47■□□□□ 0.55
VSX1-206ENST00000444511 SLC18A1P54219 525 aa18.47■□□□□ 0.55
VSX1-206ENST00000444511 LARS2Q15031 903 aaKnown RBP18.47■□□□□ 0.55
VSX1-206ENST00000444511 C6orf10Q5SRN2 563 aa18.47■□□□□ 0.55
VSX1-206ENST00000444511 WBP2NLQ6ICG8 309 aa18.47■□□□□ 0.55
VSX1-206ENST00000444511 FBXL14Q8N1E6 418 aa18.47■□□□□ 0.55
VSX1-206ENST00000444511 TMEM99Q8N816 258 aa18.47■□□□□ 0.55
VSX1-206ENST00000444511 C1orf162Q8NEQ5 155 aaPredicted RBP18.47■□□□□ 0.55
VSX1-206ENST00000444511 OR9K2Q8NGE7 335 aa18.47■□□□□ 0.55
VSX1-206ENST00000444511 SLC38A5Q8WUX1 472 aa18.47■□□□□ 0.55
VSX1-206ENST00000444511 TMEM45BQ96B21 275 aa18.47■□□□□ 0.55
VSX1-206ENST00000444511 TAPBPLQ9BX59 468 aa18.47■□□□□ 0.55
VSX1-206ENST00000444511 AMBRA1Q9C0C7 1298 aa18.47■□□□□ 0.55
VSX1-206ENST00000444511 SLC17A5Q9NRA2 495 aa18.47■□□□□ 0.55
VSX1-206ENST00000444511 SDR39U1Q9NRG7 319 aaPredicted RBP18.47■□□□□ 0.55
VSX1-206ENST00000444511 CBLN4Q9NTU7 201 aa18.47■□□□□ 0.55
VSX1-206ENST00000444511 ZNF443Q9Y2A4 671 aaPredicted RBP18.47■□□□□ 0.55
VSX1-206ENST00000444511 AMDHD2Q9Y303 409 aa18.47■□□□□ 0.55
VSX1-206ENST00000444511 CADP27708 2225 aa18.47■□□□□ 0.55
VSX1-206ENST00000444511 UBDO15205 165 aa18.46■□□□□ 0.55
VSX1-206ENST00000444511 CRLF1O75462 422 aa18.46■□□□□ 0.55
VSX1-206ENST00000444511 TFPTP0C1Z6 253 aa18.46■□□□□ 0.55
VSX1-206ENST00000444511 NCF2P19878 526 aaPredicted RBP18.46■□□□□ 0.55
VSX1-206ENST00000444511 ACAA2P42765 397 aaKnown RBP18.46■□□□□ 0.55
VSX1-206ENST00000444511 FABP6P51161 128 aa18.46■□□□□ 0.55
VSX1-206ENST00000444511 NUDT6P53370 316 aa18.46■□□□□ 0.55
VSX1-206ENST00000444511 MAGOHP61326 146 aaKnown RBP18.46■□□□□ 0.55
VSX1-206ENST00000444511 ZSWIM7Q19AV6 140 aa18.46■□□□□ 0.55
VSX1-206ENST00000444511 GTDC1Q4AE62 458 aa18.46■□□□□ 0.55
VSX1-206ENST00000444511 RPS26P11Q5JNZ5 115 aaPredicted RBP18.46■□□□□ 0.55
VSX1-206ENST00000444511 RNF220Q5VTB9 566 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms