RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 C3orf49Q96BT1 292 aa16.66■□□□□ 0.26
ATPAF2-201ENST00000444058 ZNF775Q96BV0 537 aaPredicted RBP16.66■□□□□ 0.26
ATPAF2-201ENST00000444058 THOC1Q96FV9 657 aaKnown RBP16.66■□□□□ 0.26
ATPAF2-201ENST00000444058 TMUB1Q9BVT8 246 aa16.66■□□□□ 0.26
ATPAF2-201ENST00000444058 SF3B5Q9BWJ5 86 aaKnown RBP16.66■□□□□ 0.26
ATPAF2-201ENST00000444058 C12orf10Q9HB07 376 aa16.66■□□□□ 0.26
ATPAF2-201ENST00000444058 SLC9A8Q9Y2E8 581 aa16.66■□□□□ 0.26
ATPAF2-201ENST00000444058 MED13LQ71F56 2210 aa16.65■□□□□ 0.26
ATPAF2-201ENST00000444058 PRORSD1PA6NEY8 169 aa16.65■□□□□ 0.26
ATPAF2-201ENST00000444058 NPIPB7O75200 414 aa16.65■□□□□ 0.26
ATPAF2-201ENST00000444058 MRPL33O75394 65 aaKnown RBP16.65■□□□□ 0.26
ATPAF2-201ENST00000444058 SERPINB7O75635 380 aa16.65■□□□□ 0.26
ATPAF2-201ENST00000444058 EDNRAP25101 427 aa16.65■□□□□ 0.26
ATPAF2-201ENST00000444058 SCARB2Q14108 478 aa16.65■□□□□ 0.26
ATPAF2-201ENST00000444058 SLC17A1Q14916 467 aa16.65■□□□□ 0.26
ATPAF2-201ENST00000444058 ADRM1Q16186 407 aa16.65■□□□□ 0.26
ATPAF2-201ENST00000444058 C6orf89Q6UWU4 347 aa16.65■□□□□ 0.26
ATPAF2-201ENST00000444058 ATG4DQ86TL0 474 aaPredicted RBP16.65■□□□□ 0.26
ATPAF2-201ENST00000444058 LRRC75A-AS1Q8N1F1 130 aa16.65■□□□□ 0.26
ATPAF2-201ENST00000444058 STK35Q8TDR2 534 aa16.65■□□□□ 0.26
ATPAF2-201ENST00000444058 PLPPR2Q96GM1 343 aa16.65■□□□□ 0.26
ATPAF2-201ENST00000444058 ANKRD27Q96NW4 1050 aa16.65■□□□□ 0.26
ATPAF2-201ENST00000444058 ZNF607Q96SK3 696 aa16.65■□□□□ 0.26
ATPAF2-201ENST00000444058 CPPED1Q9BRF8 314 aaPredicted RBP16.65■□□□□ 0.26
ATPAF2-201ENST00000444058 EVA1AQ9H8M9 152 aa16.65■□□□□ 0.26
ATPAF2-201ENST00000444058 ZNF446Q9NWS9 450 aa16.65■□□□□ 0.26
ATPAF2-201ENST00000444058 MALT1Q9UDY8 824 aa16.65■□□□□ 0.26
ATPAF2-201ENST00000444058 TMEM229AB2RXF0 380 aa16.64■□□□□ 0.25
ATPAF2-201ENST00000444058 RAMP1O60894 148 aa16.64■□□□□ 0.25
ATPAF2-201ENST00000444058 TMCC2O75069 709 aa16.64■□□□□ 0.25
ATPAF2-201ENST00000444058 VAMP5O95183 116 aa16.64■□□□□ 0.25
ATPAF2-201ENST00000444058 IGHV1-2P23083 117 aa16.64■□□□□ 0.25
ATPAF2-201ENST00000444058 HOXC12P31275 282 aa16.64■□□□□ 0.25
ATPAF2-201ENST00000444058 NTF4P34130 210 aa16.64■□□□□ 0.25
ATPAF2-201ENST00000444058 ADAM8P78325 824 aa16.64■□□□□ 0.25
ATPAF2-201ENST00000444058 RBBP4Q09028 425 aa16.64■□□□□ 0.25
ATPAF2-201ENST00000444058 CEACAM7Q14002 265 aa16.64■□□□□ 0.25
ATPAF2-201ENST00000444058 TSC22D1Q15714 1073 aa16.64■□□□□ 0.25
ATPAF2-201ENST00000444058 TIMM23BQ5SRD1 257 aa16.64■□□□□ 0.25
ATPAF2-201ENST00000444058 ZNF704Q6ZNC4 412 aaPredicted RBP16.64■□□□□ 0.25
ATPAF2-201ENST00000444058 DHDDSQ86SQ9 333 aa16.64■□□□□ 0.25
ATPAF2-201ENST00000444058 RETREG3Q86VR2 466 aa16.64■□□□□ 0.25
ATPAF2-201ENST00000444058 HIPK4Q8NE63 616 aa16.64■□□□□ 0.25
ATPAF2-201ENST00000444058 TMEM45BQ96B21 275 aa16.64■□□□□ 0.25
ATPAF2-201ENST00000444058 DNAJA3Q96EY1 480 aa16.64■□□□□ 0.25
ATPAF2-201ENST00000444058 CGREF1Q99674 301 aa16.64■□□□□ 0.25
ATPAF2-201ENST00000444058 TAPBPLQ9BX59 468 aa16.64■□□□□ 0.25
ATPAF2-201ENST00000444058 ESRP2Q9H6T0 727 aaKnown RBP16.64■□□□□ 0.25
ATPAF2-201ENST00000444058 ASB6Q9NWX5 421 aa16.64■□□□□ 0.25
ATPAF2-201ENST00000444058 FLVCR1Q9Y5Y0 555 aa16.64■□□□□ 0.25
ATPAF2-201ENST00000444058 AQP7P3A6NL99 342 aa16.63■□□□□ 0.25
ATPAF2-201ENST00000444058 LYZL6O75951 148 aa16.63■□□□□ 0.25
ATPAF2-201ENST00000444058 TROVE2P10155 538 aaKnown RBP eCLIP16.63■□□□□ 0.25
ATPAF2-201ENST00000444058 CD99P14209 185 aa16.63■□□□□ 0.25
ATPAF2-201ENST00000444058 GGT1P19440 569 aa16.63■□□□□ 0.25
ATPAF2-201ENST00000444058 OR7A5Q15622 319 aa16.63■□□□□ 0.25
ATPAF2-201ENST00000444058 OTUD3Q5T2D3 398 aaPredicted RBP16.63■□□□□ 0.25
ATPAF2-201ENST00000444058 C1QTNF12Q5T7M4 302 aa16.63■□□□□ 0.25
ATPAF2-201ENST00000444058 C1orf140Q5VVS0 124 aa16.63■□□□□ 0.25
ATPAF2-201ENST00000444058 ADAM5Q6NVV9 412 aa16.63■□□□□ 0.25
ATPAF2-201ENST00000444058 C5orf46Q6UWT4 87 aa16.63■□□□□ 0.25
ATPAF2-201ENST00000444058 SEZ6L2Q6UXD5 910 aa16.63■□□□□ 0.25
ATPAF2-201ENST00000444058 ZNF433Q8N7K0 673 aaPredicted RBP16.63■□□□□ 0.25
ATPAF2-201ENST00000444058 C11orf65Q8NCR3 313 aa16.63■□□□□ 0.25
ATPAF2-201ENST00000444058 DNAJA4Q8WW22 397 aaPredicted RBP16.63■□□□□ 0.25
ATPAF2-201ENST00000444058 TMEM120AQ9BXJ8 343 aa16.63■□□□□ 0.25
ATPAF2-201ENST00000444058 RSPO3Q9BXY4 272 aaPredicted RBP16.63■□□□□ 0.25
ATPAF2-201ENST00000444058 TRIM2Q9C040 744 aa16.63■□□□□ 0.25
ATPAF2-201ENST00000444058 UBTD1Q9HAC8 227 aa16.63■□□□□ 0.25
ATPAF2-201ENST00000444058 ANGPT4Q9Y264 503 aa16.63■□□□□ 0.25
ATPAF2-201ENST00000444058 MTORP42345 2549 aa16.62■□□□□ 0.25
ATPAF2-201ENST00000444058 FRS3O43559 492 aa16.62■□□□□ 0.25
ATPAF2-201ENST00000444058 ADSLP30566 484 aaPredicted RBP16.62■□□□□ 0.25
ATPAF2-201ENST00000444058 PCBP3P57721 371 aaKnown RBP16.62■□□□□ 0.25
ATPAF2-201ENST00000444058 BNIP2Q12982 314 aa16.62■□□□□ 0.25
ATPAF2-201ENST00000444058 NCMAPQ5T1S8 102 aa16.62■□□□□ 0.25
ATPAF2-201ENST00000444058 SHEQ5VZ18 495 aa16.62■□□□□ 0.25
ATPAF2-201ENST00000444058 OR7E24Q6IFN5 339 aa16.62■□□□□ 0.25
ATPAF2-201ENST00000444058 UBE2J2Q8N2K1 259 aa16.62■□□□□ 0.25
ATPAF2-201ENST00000444058 TMEM99Q8N816 258 aa16.62■□□□□ 0.25
ATPAF2-201ENST00000444058 ZNF611Q8N823 705 aa16.62■□□□□ 0.25
ATPAF2-201ENST00000444058 MFSD8Q8NHS3 518 aa16.62■□□□□ 0.25
ATPAF2-201ENST00000444058 MUCL1Q96DR8 90 aa16.62■□□□□ 0.25
ATPAF2-201ENST00000444058 CCL19Q99731 98 aa16.62■□□□□ 0.25
ATPAF2-201ENST00000444058 TAS2R16Q9NYV7 291 aa16.62■□□□□ 0.25
ATPAF2-201ENST00000444058 RPS6KB2Q9UBS0 482 aa16.62■□□□□ 0.25
ATPAF2-201ENST00000444058 TESQ9UGI8 421 aaKnown RBP16.62■□□□□ 0.25
ATPAF2-201ENST00000444058 ROS1P08922 2347 aa16.62■□□□□ 0.25
ATPAF2-201ENST00000444058 MAP1AP78559 2803 aaPredicted RBP16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 OR5H1A6NKK0 313 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 PDLIM1O00151 329 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 ARHGEF9O43307 516 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 SMPD2O60906 423 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 FZD7O75084 574 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 MFN2O95140 757 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 AKR7A3O95154 331 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 AHSA1O95433 338 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 PNMTP11086 282 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 FOSL1P15407 271 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 NFYCQ13952 458 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms