RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 TMEM171Q8WVE6 324 aa17.75■□□□□ 0.43
LRCH3-208ENST00000443727 AKAP1Q92667 903 aaKnown RBP eCLIP17.75■□□□□ 0.43
LRCH3-208ENST00000443727 PERPQ96FX8 193 aa17.75■□□□□ 0.43
LRCH3-208ENST00000443727 TMEM204Q9BSN7 226 aa17.75■□□□□ 0.43
LRCH3-208ENST00000443727 TAPBPLQ9BX59 468 aa17.75■□□□□ 0.43
LRCH3-208ENST00000443727 PARPBPQ9NWS1 579 aa17.75■□□□□ 0.43
LRCH3-208ENST00000443727 ASB6Q9NWX5 421 aa17.75■□□□□ 0.43
LRCH3-208ENST00000443727 CORO2BQ9UQ03 480 aa17.75■□□□□ 0.43
LRCH3-208ENST00000443727 SLC9A8Q9Y2E8 581 aa17.75■□□□□ 0.43
LRCH3-208ENST00000443727 FLNAP21333 2647 aaKnown RBP17.75■□□□□ 0.43
LRCH3-208ENST00000443727 A8MVM7 634 aa17.74■□□□□ 0.43
LRCH3-208ENST00000443727 EVPLLA8MZ36 301 aa17.74■□□□□ 0.43
LRCH3-208ENST00000443727 PGM3O95394 542 aa17.74■□□□□ 0.43
LRCH3-208ENST00000443727 BMP2P12643 396 aa17.74■□□□□ 0.43
LRCH3-208ENST00000443727 FOSL1P15407 271 aa17.74■□□□□ 0.43
LRCH3-208ENST00000443727 HOXB9P17482 250 aaPredicted RBP17.74■□□□□ 0.43
LRCH3-208ENST00000443727 COX5AP20674 150 aa17.74■□□□□ 0.43
LRCH3-208ENST00000443727 H3F3AP84243 136 aa17.74■□□□□ 0.43
LRCH3-208ENST00000443727 BNIP2Q12982 314 aa17.74■□□□□ 0.43
LRCH3-208ENST00000443727 OTUD3Q5T2D3 398 aaPredicted RBP17.74■□□□□ 0.43
LRCH3-208ENST00000443727 PAQR6Q6TCH4 344 aa17.74■□□□□ 0.43
LRCH3-208ENST00000443727 SSX8Q7RTT4 187 aa17.74■□□□□ 0.43
LRCH3-208ENST00000443727 P2RY8Q86VZ1 359 aa17.74■□□□□ 0.43
LRCH3-208ENST00000443727 KRT73Q86Y46 540 aa17.74■□□□□ 0.43
LRCH3-208ENST00000443727 MSRB3Q8IXL7 192 aa17.74■□□□□ 0.43
LRCH3-208ENST00000443727 VAPAQ9P0L0 249 aa17.74■□□□□ 0.43
LRCH3-208ENST00000443727 RPS6KB2Q9UBS0 482 aa17.74■□□□□ 0.43
LRCH3-208ENST00000443727 DCTN4Q9UJW0 460 aa17.74■□□□□ 0.43
LRCH3-208ENST00000443727 TRIM33Q9UPN9 1127 aa17.74■□□□□ 0.43
LRCH3-208ENST00000443727 A0A1W2PP18 115 aa17.73■□□□□ 0.43
LRCH3-208ENST00000443727 LIPT2A6NK58 231 aa17.73■□□□□ 0.43
LRCH3-208ENST00000443727 FRS3O43559 492 aa17.73■□□□□ 0.43
LRCH3-208ENST00000443727 RAD51DO75771 328 aa17.73■□□□□ 0.43
LRCH3-208ENST00000443727 AKR7A3O95154 331 aa17.73■□□□□ 0.43
LRCH3-208ENST00000443727 ETS2P15036 469 aa17.73■□□□□ 0.43
LRCH3-208ENST00000443727 HOXC5Q00444 222 aa17.73■□□□□ 0.43
LRCH3-208ENST00000443727 CDK6Q00534 326 aa17.73■□□□□ 0.43
LRCH3-208ENST00000443727 BSPH1Q075Z2 132 aa17.73■□□□□ 0.43
LRCH3-208ENST00000443727 FAPQ12884 760 aa17.73■□□□□ 0.43
LRCH3-208ENST00000443727 TIMM23BQ5SRD1 257 aa17.73■□□□□ 0.43
LRCH3-208ENST00000443727 NCMAPQ5T1S8 102 aa17.73■□□□□ 0.43
LRCH3-208ENST00000443727 REEP3Q6NUK4 255 aa17.73■□□□□ 0.43
LRCH3-208ENST00000443727 ZNF433Q8N7K0 673 aaPredicted RBP17.73■□□□□ 0.43
LRCH3-208ENST00000443727 ZNF611Q8N823 705 aa17.73■□□□□ 0.43
LRCH3-208ENST00000443727 SPATA5L1Q9BVQ7 753 aa17.73■□□□□ 0.43
LRCH3-208ENST00000443727 CXorf56Q9H5V9 222 aa17.73■□□□□ 0.43
LRCH3-208ENST00000443727 NPHS2Q9NP85 383 aa17.73■□□□□ 0.43
LRCH3-208ENST00000443727 ADPRHL2Q9NX46 363 aa17.73■□□□□ 0.43
LRCH3-208ENST00000443727 UPB1Q9UBR1 384 aa17.73■□□□□ 0.43
LRCH3-208ENST00000443727 ARAFP10398 606 aa17.72■□□□□ 0.43
LRCH3-208ENST00000443727 SLC6A2P23975 617 aa17.72■□□□□ 0.43
LRCH3-208ENST00000443727 SLC17A1Q14916 467 aa17.72■□□□□ 0.43
LRCH3-208ENST00000443727 C1orf140Q5VVS0 124 aa17.72■□□□□ 0.43
LRCH3-208ENST00000443727 YTHDF3Q7Z739 585 aaKnown RBP17.72■□□□□ 0.43
LRCH3-208ENST00000443727 GPAT4Q86UL3 456 aa17.72■□□□□ 0.43
LRCH3-208ENST00000443727 KRTAP1-3Q8IUG1 177 aa17.72■□□□□ 0.43
LRCH3-208ENST00000443727 TMEM99Q8N816 258 aa17.72■□□□□ 0.43
LRCH3-208ENST00000443727 SLC35B4Q969S0 331 aa17.72■□□□□ 0.43
LRCH3-208ENST00000443727 SLC52A3Q9NQ40 469 aa17.72■□□□□ 0.43
LRCH3-208ENST00000443727 DLL4Q9NR61 685 aa17.72■□□□□ 0.43
LRCH3-208ENST00000443727 TAS2R16Q9NYV7 291 aa17.72■□□□□ 0.43
LRCH3-208ENST00000443727 LEF1Q9UJU2 399 aaPredicted RBP17.72■□□□□ 0.43
LRCH3-208ENST00000443727 CHST2Q9Y4C5 530 aa17.72■□□□□ 0.43
LRCH3-208ENST00000443727 FLVCR1Q9Y5Y0 555 aa17.72■□□□□ 0.43
LRCH3-208ENST00000443727 PRR14LQ5THK1 2151 aa17.72■□□□□ 0.43
LRCH3-208ENST00000443727 A0A0G2JND7 137 aa17.71■□□□□ 0.43
LRCH3-208ENST00000443727 OR5H1A6NKK0 313 aa17.71■□□□□ 0.43
LRCH3-208ENST00000443727 ANGPT2O15123 496 aa17.71■□□□□ 0.43
LRCH3-208ENST00000443727 AHSA1O95433 338 aa17.71■□□□□ 0.43
LRCH3-208ENST00000443727 PRKAR1BP31321 381 aa17.71■□□□□ 0.43
LRCH3-208ENST00000443727 NTF4P34130 210 aa17.71■□□□□ 0.43
LRCH3-208ENST00000443727 TMEM225Q6GV28 225 aa17.71■□□□□ 0.43
LRCH3-208ENST00000443727 ATG4DQ86TL0 474 aaPredicted RBP17.71■□□□□ 0.43
LRCH3-208ENST00000443727 STON2Q8WXE9 905 aa17.71■□□□□ 0.43
LRCH3-208ENST00000443727 FBXW5Q969U6 566 aa17.71■□□□□ 0.43
LRCH3-208ENST00000443727 C3orf49Q96BT1 292 aa17.71■□□□□ 0.43
LRCH3-208ENST00000443727 C18orf12Q96KH6 178 aa17.71■□□□□ 0.43
LRCH3-208ENST00000443727 ZNF607Q96SK3 696 aa17.71■□□□□ 0.43
LRCH3-208ENST00000443727 SIKE1Q9BRV8 207 aa17.71■□□□□ 0.43
LRCH3-208ENST00000443727 MALT1Q9UDY8 824 aa17.71■□□□□ 0.43
LRCH3-208ENST00000443727 SLC13A4Q9UKG4 626 aa17.71■□□□□ 0.43
LRCH3-208ENST00000443727 LAMP3Q9UQV4 416 aa17.71■□□□□ 0.43
LRCH3-208ENST00000443727 NDUFAF1Q9Y375 327 aa17.71■□□□□ 0.43
LRCH3-208ENST00000443727 ARID1AO14497 2285 aa17.71■□□□□ 0.43
LRCH3-208ENST00000443727 DSCAMO60469 2012 aa17.71■□□□□ 0.42
LRCH3-208ENST00000443727 DPRXA6NFQ7 191 aa17.7■□□□□ 0.42
LRCH3-208ENST00000443727 AQP7P3A6NL99 342 aa17.7■□□□□ 0.42
LRCH3-208ENST00000443727 ELOA3DA6NLF2 546 aaPredicted RBP17.7■□□□□ 0.42
LRCH3-208ENST00000443727 EDF1O60869 148 aaKnown RBP17.7■□□□□ 0.42
LRCH3-208ENST00000443727 GTF2E2P29084 291 aaKnown RBP17.7■□□□□ 0.42
LRCH3-208ENST00000443727 PTH2RP49190 550 aa17.7■□□□□ 0.42
LRCH3-208ENST00000443727 SCARB2Q14108 478 aa17.7■□□□□ 0.42
LRCH3-208ENST00000443727 ELOA3BQ3SY89 546 aa17.7■□□□□ 0.42
LRCH3-208ENST00000443727 OR7E24Q6IFN5 339 aa17.7■□□□□ 0.42
LRCH3-208ENST00000443727 ADAM5Q6NVV9 412 aa17.7■□□□□ 0.42
LRCH3-208ENST00000443727 AAED1Q7RTV5 226 aa17.7■□□□□ 0.42
LRCH3-208ENST00000443727 C10orf111Q8N326 155 aa17.7■□□□□ 0.42
LRCH3-208ENST00000443727 ELOA3Q8NG57 546 aa17.7■□□□□ 0.42
LRCH3-208ENST00000443727 OR9K2Q8NGE7 335 aa17.7■□□□□ 0.42
LRCH3-208ENST00000443727 OR52E4Q8NGH9 312 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms