RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 CAMKMTQ7Z624 323 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 TRAPPC5Q8IUR0 188 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 OR6N1Q8NGY5 312 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 CLCC1Q96S66 551 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 EPHA6Q9UF33 1036 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 SLC35A3Q9Y2D2 325 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 DOCK8Q8NF50 2099 aa4.66□□□□□ -1.66
HERC1-201ENST00000443617 SLC16A8O95907 504 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 CYB5AP00167 134 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 PAX6P26367 422 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 TEAD1P28347 426 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 CD96P40200 585 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 CASRP41180 1078 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 CSNK1EP49674 416 aaKnown RBP4.65□□□□□ -1.66
HERC1-201ENST00000443617 RHEBQ15382 184 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 TMEM220Q6QAJ8 160 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 SIRT6Q8N6T7 355 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 CASTOR1Q8WTX7 329 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 RNF141Q8WVD5 230 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 SULT4A1Q9BR01 284 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 ORAI3Q9BRQ5 295 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 ZCCHC4Q9H5U6 513 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 KLK11Q9UBX7 282 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 NEDD8-MDP1E9PL57 170 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 PRAMEF4O60810 478 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 SEMA7AO75326 666 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 NQO2P16083 231 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 PTNP21246 168 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 SLC6A6P31641 620 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 CTSCP53634 463 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 IRF4Q15306 451 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 FNDC3BQ53EP0 1204 aaKnown RBP4.65□□□□□ -1.66
HERC1-201ENST00000443617 PRAMEF9Q5VWM5 478 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 ARL14Q8N4G2 192 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 OR2AK2Q8NG84 335 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 OR13C2Q8NGS9 318 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 OR9A1PQ8NGU1 263 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 MYEOVQ96EZ4 313 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 GTF2A1LQ9UNN4 478 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 AP4M1O00189 453 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 CD52P31358 61 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 ACTA2P62736 377 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 ACTG2P63267 376 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 SMAD3P84022 425 aaKnown RBP4.65□□□□□ -1.66
HERC1-201ENST00000443617 ZNF155Q12901 538 aaPredicted RBP4.65□□□□□ -1.66
HERC1-201ENST00000443617 SERINC5Q86VE9 423 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 ZMYND19Q96E35 227 aaPredicted RBP4.65□□□□□ -1.66
HERC1-201ENST00000443617 ESRP2Q9H6T0 727 aaKnown RBP4.65□□□□□ -1.66
HERC1-201ENST00000443617 GSKIPQ9P0R6 139 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 A4GNTQ9UNA3 340 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 TCAPO15273 167 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 GPRIN2O60269 458 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 VNN2O95498 520 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 IFNA2P01563 188 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 RPN2P04844 631 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 MBOAT2Q6ZWT7 520 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 TMCO2Q7Z6W1 182 aaPredicted RBP4.65□□□□□ -1.66
HERC1-201ENST00000443617 ZNF840PA6NDX5 716 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 ZNF208O43345 1280 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 LRP3O75074 770 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 AKR7A3O95154 331 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 PRAMEF12O95522 483 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 CHRM4P08173 479 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 SNRNP70P08621 437 aaKnown RBP4.65□□□□□ -1.66
HERC1-201ENST00000443617 OPRD1P41143 372 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 FAM46CQ5VWP2 391 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 C15orf54Q8N8G6 183 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 MYLIPQ8WY64 445 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 NEIL2Q969S2 332 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 A0A087WUU8 490 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 TMEM200CA6NKL6 621 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 HMGB3O15347 200 aaKnown RBP4.65□□□□□ -1.66
HERC1-201ENST00000443617 PAPLNO95428 1278 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 NTN1O95631 604 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 ACHEP22303 614 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 VAMP1P23763 118 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 SSR2P43308 183 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 S100A10P60903 97 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 FOXK2Q01167 660 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 NDUFAF7Q7L592 441 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 MRPL10Q7Z7H8 261 aaKnown RBP4.65□□□□□ -1.66
HERC1-201ENST00000443617 MRI1Q9BV20 369 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 FAM86C1Q9NVL1 165 aa4.65□□□□□ -1.66
HERC1-201ENST00000443617 RCC2Q9P258 522 aaKnown RBP4.65□□□□□ -1.66
HERC1-201ENST00000443617 GMFGO60234 142 aa4.65□□□□□ -1.67
HERC1-201ENST00000443617 CLN5O75503 358 aa4.65□□□□□ -1.67
HERC1-201ENST00000443617 SLC25A12O75746 678 aa4.65□□□□□ -1.67
HERC1-201ENST00000443617 AMY2AP04746 511 aa4.65□□□□□ -1.67
HERC1-201ENST00000443617 SLC25A4P12235 298 aa4.65□□□□□ -1.67
HERC1-201ENST00000443617 GAS1P54826 345 aa4.65□□□□□ -1.67
HERC1-201ENST00000443617 LASP1Q14847 261 aaKnown RBP4.65□□□□□ -1.67
HERC1-201ENST00000443617 TEAD2Q15562 447 aa4.65□□□□□ -1.67
HERC1-201ENST00000443617 TPRG1Q6ZUI0 275 aa4.65□□□□□ -1.67
HERC1-201ENST00000443617 SLC29A4Q7RTT9 530 aa4.65□□□□□ -1.67
HERC1-201ENST00000443617 HAVCR2Q8TDQ0 301 aa4.65□□□□□ -1.67
HERC1-201ENST00000443617 DVL3Q92997 716 aaPredicted RBP4.65□□□□□ -1.67
HERC1-201ENST00000443617 SLC25A21Q9BQT8 299 aaPredicted RBP4.65□□□□□ -1.67
HERC1-201ENST00000443617 C5AR2Q9P296 337 aa4.65□□□□□ -1.67
HERC1-201ENST00000443617 A0A1B0GTQ1 180 aa4.65□□□□□ -1.67
HERC1-201ENST00000443617 IFITM5A6NNB3 132 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms