RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 PHC2Q8IXK0 858 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 MEIOBQ8N635 442 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 OR52J3Q8NH60 311 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 DCLRE1CQ96SD1 692 aaKnown RBP6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 JAM3Q9BX67 310 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 ZNF552Q9H707 407 aaPredicted RBP6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 TAS2R7Q9NYW3 318 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 NPFFR2Q9Y5X5 522 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 SHISA3A0PJX4 238 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 C2orf72A6NCS6 295 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 H3BML4 177 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 UQCRC2P22695 453 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 UQCRC1P31930 480 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 CD96P40200 585 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 MC3RP41968 323 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 EFNA3P52797 238 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 DCAF7P61962 342 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 CTAG1AP78358 180 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 POU6F2P78424 691 aaPredicted RBP6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 TSTQ16762 297 aaKnown RBP6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 RPS26P11Q5JNZ5 115 aaPredicted RBP6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 EXOSC6Q5RKV6 272 aaKnown RBP6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 ATAD3CQ5T2N8 411 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 MRPL14Q6P1L8 145 aaKnown RBP6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 AQP11Q8NBQ7 271 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 PSD4Q8NDX1 1056 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 SLC7A13Q8TCU3 470 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 CREB3L4Q8TEY5 395 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 WBP1Q96G27 269 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 KCNJ15Q99712 375 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 RACGAP1Q9H0H5 632 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 TPK1Q9H3S4 243 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 PPP1R3EQ9H7J1 279 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 ABCB10Q9NRK6 738 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 A0A1W2PR48 441 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 PRSS44E7EML9 344 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 KLF7O75840 302 aaPredicted RBP6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 OR6A2O95222 327 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 IL33O95760 270 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 THY1P04216 161 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 TRAPPC2P0DI81 140 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 TRAPPC2BP0DI82 140 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 HOXC12P31275 282 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 SOX3P41225 446 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 SPIBQ01892 262 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 ASAH1Q13510 395 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 EFR3AQ14156 821 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 CDC73Q6P1J9 531 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 BCDIN3DQ7Z5W3 292 aaKnown RBP6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 MRGPRGQ86SM5 289 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 SLC30A8Q8IWU4 369 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 DEPDC4Q8N2C3 294 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 CADM2Q8N3J6 435 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 NATD1Q8N6N6 113 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 AMER3Q8N944 861 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 KBTBD8Q8NFY9 601 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 HTRA1Q92743 480 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 LCORQ96JN0 433 aaPredicted RBP6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 TP63Q9H3D4 680 aaPredicted RBP6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 SMURF1Q9HCE7 757 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 FGF20Q9NP95 211 aaPredicted RBP6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 KIF17Q9P2E2 1029 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 MYOTQ9UBF9 498 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 ADAM29Q9UKF5 820 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 DIMT1Q9UNQ2 313 aaKnown RBP6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 VDAC3Q9Y277 283 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 SPG11Q96JI7 2443 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 IGHV1-45A0A0A0MS14 117 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 A0A1B0GUH1 482 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 A0A1W2PRQ8 180 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 PRICKLE3O43900 615 aaPredicted RBP6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 PRKYO43930 277 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 TMPRSS11DO60235 418 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 WISP1O95388 367 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 DDCP20711 480 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 NKX2-5P52952 324 aaPredicted RBP6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 MLLT11Q13015 90 aaPredicted RBP6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 NRARPQ7Z6K4 114 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 LAX1Q8IWV1 398 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 UBE2J2Q8N2K1 259 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 POGLUT1Q8NBL1 392 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 PROKR2Q8NFJ6 384 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 OR52I1Q8NGK6 324 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 SNRNP40Q96DI7 357 aaKnown RBP6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 ZC3HAV1LQ96H79 300 aaKnown RBP6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 KCNS3Q9BQ31 491 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 ISYNA1Q9NPH2 558 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 TNFRSF10DQ9UBN6 386 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 POLEQ07864 2286 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 A0A0A6YYD5 115 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 TRGV5A0A0B4J1U4 118 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 LRRTM2O43300 516 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 ASNA1O43681 348 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 MPZL2O60487 215 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 CCNB2O95067 398 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 UMODP07911 640 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 SP1P08047 785 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 CSF3P09919 207 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 GUCA1AP43080 201 aaPredicted RBP6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 ETV1P50549 477 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms