RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 DACT3Q96B18 629 aaPredicted RBP15.17■□□□□ 0.02
SEMA3B-207ENST00000441915 BMFQ96LC9 184 aa15.17■□□□□ 0.02
SEMA3B-207ENST00000441915 OR14A2Q96R54 314 aa15.17■□□□□ 0.02
SEMA3B-207ENST00000441915 SLCO1C1Q9NYB5 712 aa15.17■□□□□ 0.02
SEMA3B-207ENST00000441915 GNG8Q9UK08 70 aa15.17■□□□□ 0.02
SEMA3B-207ENST00000441915 IER3IP1Q9Y5U9 82 aa15.17■□□□□ 0.02
SEMA3B-207ENST00000441915 F5P12259 2224 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 TEX51A0A1B0GUA7 166 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 SLC35E2P0CK97 266 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 CXCL3P19876 107 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 RAG2P55895 527 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 GGTLC2Q14390 218 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 ESCO2Q56NI9 601 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 PARM1Q6UWI2 310 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 SLC35F2Q8IXU6 374 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 CSNK1A1LQ8N752 337 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 RPLP0P6Q8NHW5 317 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 ANKRD9Q96BM1 317 aaPredicted RBP15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 SIPA1Q96FS4 1042 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 GPR137Q96N19 417 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 SLC7A5P2Q9GIP4 190 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 NRIP3Q9NQ35 241 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 RPS6KB2Q9UBS0 482 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 ENTPD2Q9Y5L3 495 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 TRABD2BA6NFA1 517 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 GRXCR1A8MXD5 290 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 H2AFB2P0C5Z0 115 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 EDNRAP25101 427 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 RPS11P62280 158 aaKnown RBP eCLIP15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 GSG1Q2KHT4 349 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 SLITRK4Q8IW52 837 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 PDCD1LG2Q9BQ51 273 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 RPP25Q9BUL9 199 aaKnown RBP15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 ACTR6Q9GZN1 396 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 IGFLR1Q9H665 355 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 FBRSQ9HAH7 460 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 MKKSQ9NPJ1 570 aaPredicted RBP15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 EVA1BQ9NVM1 165 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 B3GNT2Q9NY97 397 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 SCML1Q9UN30 329 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 REV3LO60673 3130 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 A0A1W2PQF6 199 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 ZNF879B4DU55 563 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 MCIDASD6RGH6 385 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 GNB5O14775 395 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 COL9A1P20849 921 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 RPL4P36578 427 aaKnown RBP15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 LSSP48449 732 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 DYRK1AQ13627 763 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 LINC00114Q6XXX2 140 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 DGAT2L6Q6ZPD8 337 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 BTN2A1Q7KYR7 527 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 ZNF550Q7Z398 422 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 OR4N2Q8NGD1 307 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 OR14A16Q8NHC5 309 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 GIMAP1Q8WWP7 306 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 HOXB13Q92826 284 aaPredicted RBP15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 MRPL48Q96GC5 212 aaKnown RBP15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 MTIF3Q9H2K0 278 aaKnown RBP15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 ICAM5Q9UMF0 924 aa15.16■□□□□ 0.02
SEMA3B-207ENST00000441915 CTDSPLO15194 276 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 GSTZ1O43708 216 aaPredicted RBP15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 MT-ND4P03905 459 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 CD1AP06126 327 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 PER3P56645 1201 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 RAB38P57729 211 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 VSX2P58304 361 aaPredicted RBP15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 UBE2NLQ5JXB2 153 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 RNF44Q7L0R7 432 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 PRSS45Q7RTY3 260 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 OR56B4Q8NH76 319 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 LGALS14Q8TCE9 139 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 SMIM4Q8WVI0 70 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 ELSPBP1Q96BH3 223 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 SGTBQ96EQ0 304 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 CCDC3Q9BQI4 270 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 STARD5Q9NSY2 213 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 HRASLS2Q9NWW9 162 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 ADAM18Q9Y3Q7 739 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 USP34Q70CQ2 3546 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 OR5K3A6NET4 321 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 TNFRSF10CO14798 259 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 CTAG1AP78358 180 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 TEX261Q6UWH6 196 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 BMPERQ8N8U9 685 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 PATE1Q8WXA2 126 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 CMTM3Q96MX0 182 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 LMF2Q9BU23 707 aaKnown RBP15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 LMAN2LQ9H0V9 348 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 DZANK1Q9NVP4 752 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 NUP50Q9UKX7 468 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 U3KQ87 197 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 FANCMQ8IYD8 2048 aa15.15■□□□□ 0.02
SEMA3B-207ENST00000441915 A0A0C4DFX4 3053 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 A0A0J9YY10 115 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 A0A1B0GVI7 797 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 RDH16O75452 317 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 ANKRD34CP0C6C1 535 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 SRMP19623 302 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms