RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 PRAMEF7Q5VXH5 474 aa14.34□□□□□ -0.11
SNRPD3-204ENST00000439775 WBP2NLQ6ICG8 309 aa14.34□□□□□ -0.11
SNRPD3-204ENST00000439775 CASP12Q6UXS9 341 aa14.34□□□□□ -0.11
SNRPD3-204ENST00000439775 GTF2H4Q92759 462 aa14.34□□□□□ -0.11
SNRPD3-204ENST00000439775 NEUROG1Q92886 237 aa14.34□□□□□ -0.11
SNRPD3-204ENST00000439775 AURKBQ96GD4 344 aaPredicted RBP14.34□□□□□ -0.11
SNRPD3-204ENST00000439775 TMEM19Q96HH6 336 aa14.34□□□□□ -0.11
SNRPD3-204ENST00000439775 RADILQ96JH8 1075 aa14.34□□□□□ -0.11
SNRPD3-204ENST00000439775 PARPBPQ9NWS1 579 aa14.34□□□□□ -0.11
SNRPD3-204ENST00000439775 MAGED1Q9Y5V3 778 aaPredicted RBP14.34□□□□□ -0.11
SNRPD3-204ENST00000439775 A0A0G2JPF8 293 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 A0A1W2PP18 115 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 CIB4A0PJX0 185 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 HNRNPCL2B2RXH8 293 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 SHISA9B4DS77 424 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 HNRNPCL3B7ZW38 293 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 PDLIM1O00151 329 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 HNRNPCL1O60812 293 aaKnown RBP14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 TGDSO95455 350 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 GPIP06744 558 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 ITGA5P08648 1049 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 GKN3PP0CG01 181 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 HNRNPCL4P0DMR1 293 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 BMP2P12643 396 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 HOXB9P17482 250 aaPredicted RBP14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 CXCR1P25024 350 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 STX1BP61266 288 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 COPZ1P61923 177 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 FADDQ13158 208 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 OR7E24Q6IFN5 339 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 DTX2Q86UW9 622 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 C1orf162Q8NEQ5 155 aaPredicted RBP14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 SLC35B4Q969S0 331 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 TMEM45BQ96B21 275 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 TRMT61AQ96FX7 289 aaKnown RBP14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 MUS81Q96NY9 551 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 SF3B5Q9BWJ5 86 aaKnown RBP14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 SPATA9Q9BWV2 254 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 AMBRA1Q9C0C7 1298 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 GRIP2Q9C0E4 1043 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 PAIP1Q9H074 479 aaKnown RBP14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 RAD21L1Q9H4I0 556 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 PIF1Q9H611 641 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 ARMC7Q9H6L4 198 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 CACYBPQ9HB71 228 aaKnown RBP14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 A4GALTQ9NPC4 353 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 FAIMQ9NVQ4 179 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 DCTN4Q9UJW0 460 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 MGAT4BQ9UQ53 548 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 IFT52Q9Y366 437 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 SLC25A15Q9Y619 301 aa14.33□□□□□ -0.12
SNRPD3-204ENST00000439775 ZANQ9Y493 2812 aa14.32□□□□□ -0.12
SNRPD3-204ENST00000439775 A0A096LPI6 279 aa14.32□□□□□ -0.12
SNRPD3-204ENST00000439775 LIPT2A6NK58 231 aa14.32□□□□□ -0.12
SNRPD3-204ENST00000439775 CCT8L1PA6NM43 557 aa14.32□□□□□ -0.12
SNRPD3-204ENST00000439775 ABCD4O14678 606 aa14.32□□□□□ -0.12
SNRPD3-204ENST00000439775 SMAD7O15105 426 aaKnown RBP14.32□□□□□ -0.12
SNRPD3-204ENST00000439775 PTAFRP25105 342 aa14.32□□□□□ -0.12
SNRPD3-204ENST00000439775 CDH11P55287 796 aa14.32□□□□□ -0.12
SNRPD3-204ENST00000439775 FAPQ12884 760 aa14.32□□□□□ -0.12
SNRPD3-204ENST00000439775 RGNQ15493 299 aa14.32□□□□□ -0.12
SNRPD3-204ENST00000439775 RPS26P11Q5JNZ5 115 aaPredicted RBP14.32□□□□□ -0.12
SNRPD3-204ENST00000439775 OTUD3Q5T2D3 398 aaPredicted RBP14.32□□□□□ -0.12
SNRPD3-204ENST00000439775 C1QTNF12Q5T7M4 302 aa14.32□□□□□ -0.12
SNRPD3-204ENST00000439775 TMEM108Q6UXF1 575 aa14.32□□□□□ -0.12
SNRPD3-204ENST00000439775 C17orf78Q8N4C9 275 aa14.32□□□□□ -0.12
SNRPD3-204ENST00000439775 GTPBP3Q969Y2 492 aaKnown RBP14.32□□□□□ -0.12
SNRPD3-204ENST00000439775 TRAF4Q9BUZ4 470 aaPredicted RBP14.32□□□□□ -0.12
SNRPD3-204ENST00000439775 BCL2L10Q9HD36 194 aa14.32□□□□□ -0.12
SNRPD3-204ENST00000439775 TCF7L2Q9NQB0 619 aa14.32□□□□□ -0.12
SNRPD3-204ENST00000439775 CISD1Q9NZ45 108 aaKnown RBP14.32□□□□□ -0.12
SNRPD3-204ENST00000439775 ZNF232Q9UNY5 417 aa14.32□□□□□ -0.12
SNRPD3-204ENST00000439775 CHST2Q9Y4C5 530 aa14.32□□□□□ -0.12
SNRPD3-204ENST00000439775 PCDHB14Q9Y5E9 798 aa14.32□□□□□ -0.12
SNRPD3-204ENST00000439775 USF3Q68DE3 2245 aa14.31□□□□□ -0.12
SNRPD3-204ENST00000439775 AQP7P3A6NL99 342 aa14.31□□□□□ -0.12
SNRPD3-204ENST00000439775 A8MVM7 634 aa14.31□□□□□ -0.12
SNRPD3-204ENST00000439775 CLIC1O00299 241 aa14.31□□□□□ -0.12
SNRPD3-204ENST00000439775 POLR3GO15318 223 aaPredicted RBP14.31□□□□□ -0.12
SNRPD3-204ENST00000439775 PRG2P13727 222 aa14.31□□□□□ -0.12
SNRPD3-204ENST00000439775 CEACAM7Q14002 265 aa14.31□□□□□ -0.12
SNRPD3-204ENST00000439775 GABRA6Q16445 453 aa14.31□□□□□ -0.12
SNRPD3-204ENST00000439775 LRIF1Q5T3J3 769 aa14.31□□□□□ -0.12
SNRPD3-204ENST00000439775 SLC2A7Q6PXP3 512 aa14.31□□□□□ -0.12
SNRPD3-204ENST00000439775 KLHL17Q6TDP4 642 aa14.31□□□□□ -0.12
SNRPD3-204ENST00000439775 CLIP4Q8N3C7 705 aa14.31□□□□□ -0.12
SNRPD3-204ENST00000439775 CADM2Q8N3J6 435 aa14.31□□□□□ -0.12
SNRPD3-204ENST00000439775 GOLGA6L1Q8N7Z2 621 aa14.31□□□□□ -0.12
SNRPD3-204ENST00000439775 OR9K2Q8NGE7 335 aa14.31□□□□□ -0.12
SNRPD3-204ENST00000439775 OR52E4Q8NGH9 312 aa14.31□□□□□ -0.12
SNRPD3-204ENST00000439775 OR52N5Q8NH56 324 aa14.31□□□□□ -0.12
SNRPD3-204ENST00000439775 BBS10Q8TAM1 723 aa14.31□□□□□ -0.12
SNRPD3-204ENST00000439775 ALG2Q9H553 416 aa14.31□□□□□ -0.12
SNRPD3-204ENST00000439775 SLC7A10Q9NS82 523 aa14.31□□□□□ -0.12
SNRPD3-204ENST00000439775 FN1P02751 2386 aaKnown RBP14.31□□□□□ -0.12
SNRPD3-204ENST00000439775 ABCA2Q9BZC7 2435 aa14.31□□□□□ -0.12
SNRPD3-204ENST00000439775 TMEM229AB2RXF0 380 aa14.3□□□□□ -0.12
SNRPD3-204ENST00000439775 FRS3O43559 492 aa14.3□□□□□ -0.12
SNRPD3-204ENST00000439775 NPIPB7O75200 414 aa14.3□□□□□ -0.12
SNRPD3-204ENST00000439775 AKR7A3O95154 331 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms