RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 OR7G2Q8NG99 324 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 OR4D10Q8NGI6 311 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 ADAMTS15Q8TE58 950 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 GRHL3Q8TE85 626 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 IRF7Q92985 503 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 GIMAP5Q96F15 307 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 ZNF416Q9BWM5 594 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 WASH6PQ9NQA3 447 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 BRWD1Q9NSI6 2320 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 ZNF223Q9UK11 482 aaPredicted RBP12.48□□□□□ -0.41
PCNX3-202ENST00000439247 ACSL5Q9ULC5 683 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 C2orf16Q68DN1 1984 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 TRBV2A0A0J9YWF9 115 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 MEIS3P1A6NDR6 274 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 PEX12O00623 359 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 GNB5O14775 395 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 EMC8O43402 210 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 CREBL2O60519 120 aaPredicted RBP12.48□□□□□ -0.41
PCNX3-202ENST00000439247 EGFP01133 1207 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 ASGR2P07307 311 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 GABRA1P14867 456 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 UBE2NLQ5JXB2 153 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 LNX2Q8N448 690 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 DNAAF1Q8NEP3 725 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 SDR9C7Q8NEX9 313 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 BRIX1Q8TDN6 353 aaKnown RBP12.48□□□□□ -0.41
PCNX3-202ENST00000439247 SCARB1Q8WTV0 552 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 ZDHHC1Q8WTX9 485 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 C7orf50Q9BRJ6 194 aaKnown RBP12.48□□□□□ -0.41
PCNX3-202ENST00000439247 DPEP2Q9H4A9 486 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 PELI2Q9HAT8 420 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 SLC6A20Q9NP91 592 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 CMC2Q9NRP2 79 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 NFKBIL1Q9UBC1 381 aaPredicted RBP12.48□□□□□ -0.41
PCNX3-202ENST00000439247 ALPK2Q86TB3 2170 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 OR6C74A6NCV1 312 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 SLC22A31A6NKX4 558 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 KRT33AO76009 404 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 GIPP09681 153 aaPredicted RBP12.48□□□□□ -0.41
PCNX3-202ENST00000439247 F3P13726 295 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 IFNGR1P15260 489 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 RPL35P42766 123 aaKnown RBP12.48□□□□□ -0.41
PCNX3-202ENST00000439247 PTH2RP49190 550 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 PRR5P85299 388 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 DHODHQ02127 395 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 TCEAL5Q5H9L2 206 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 ZNF660Q6AZW8 331 aaPredicted RBP12.48□□□□□ -0.41
PCNX3-202ENST00000439247 TTLQ8NG68 377 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 OR56A1Q8NGH5 318 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 TMEM239Q8WW34 195 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 SLC25A28Q96A46 364 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 OTUB2Q96DC9 234 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 LCORQ96JN0 433 aaPredicted RBP12.48□□□□□ -0.41
PCNX3-202ENST00000439247 NKX3-1Q99801 234 aaPredicted RBP12.48□□□□□ -0.41
PCNX3-202ENST00000439247 DPYSL5Q9BPU6 564 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 EPHX3Q9H6B9 360 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 PRDM7Q9NQW5 492 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 WDR45Q9Y484 360 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 HNRNPA1P09651 372 aaKnown RBP eCLIP12.47□□□□□ -0.41
PCNX3-202ENST00000439247 HIST1H1TP22492 207 aaPredicted RBP12.47□□□□□ -0.41
PCNX3-202ENST00000439247 EDNRAP25101 427 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 MST1P26927 711 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 PRKAR1BP31321 381 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 ID2Q02363 134 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 HYAL1Q12794 435 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 GXYLT1Q4G148 440 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 ZNF626Q68DY1 528 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 GSG1LQ6UXU4 331 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 AMZ2Q86W34 360 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 FAM71CQ8NEG0 241 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 OR4K13Q8NH42 304 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 C1orf216Q8TAB5 229 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 SYNPRQ8TBG9 265 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 PMM1Q92871 262 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 MS4A6EQ96DS6 147 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 TNFRSF13CQ96RJ3 184 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 MEPEQ9NQ76 525 aaPredicted RBP12.47□□□□□ -0.41
PCNX3-202ENST00000439247 PCDHB16Q9NRJ7 776 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 MRTO4Q9UKD2 239 aaKnown RBP12.47□□□□□ -0.41
PCNX3-202ENST00000439247 ZNF346Q9UL40 294 aaKnown RBP12.47□□□□□ -0.41
PCNX3-202ENST00000439247 MRPS23Q9Y3D9 190 aaKnown RBP12.47□□□□□ -0.41
PCNX3-202ENST00000439247 TRAV1-2A0A0B4J238 106 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 FAM86C2PA6NEL3 165 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 AIPO00170 330 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 GOSR2O14653 212 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 B3GALNT1O75752 331 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 RLN1P04808 185 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 HIST1H2ABP04908 130 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 CSNK2A2P19784 350 aaPredicted RBP12.47□□□□□ -0.41
PCNX3-202ENST00000439247 ACHEP22303 614 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 SLC2A5P22732 501 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 P2RX1P51575 399 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 AKR1D1P51857 326 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 ZNF169Q14929 603 aaPredicted RBP12.47□□□□□ -0.41
PCNX3-202ENST00000439247 CDK5R1Q15078 307 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 CLVS2Q5SYC1 327 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 FAM69AQ5T7M9 428 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 TMEM64Q6YI46 380 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 HIST3H2AQ7L7L0 130 aa12.47□□□□□ -0.41
PCNX3-202ENST00000439247 OR5K2Q8NHB8 316 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms