RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 TRAV34A0A0B4J273 112 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 OOEPA6NGQ2 149 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 CCDC69A6NI79 296 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 TMCO5BA8MYB1 307 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 DDX39AO00148 427 aaKnown RBP1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 SLC9A3R1O14745 358 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 TTI1O43156 1089 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 STAM2O75886 525 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 KIAA0754O94854 1291 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 TGDSO95455 350 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 MT-ND3P03897 115 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 IFNW1P05000 195 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 TPM2P07951 284 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 KRT3P12035 628 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 TCF4P15884 667 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 PDGFRAP16234 1089 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 DESP17661 470 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 ATP6V1E1P36543 226 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 CXCL6P80162 114 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 PRKCEQ02156 737 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 PAX2Q02962 417 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 MZT1Q08AG7 82 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 LRRC74AQ0VAA2 488 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 PPP2R5CQ13362 524 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 PTK6Q13882 451 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 TYSND1Q2T9J0 566 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 SLC25A35Q3KQZ1 300 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 C2orf76Q3KRA6 126 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 DNAJC21Q5F1R6 531 aaKnown RBP1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 ZNF789Q5FWF6 425 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 ARMCX4Q5H9R4 360 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 AGAP6Q5VW22 663 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 TXNRD3NBQ6F5E7 133 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 BTNL8Q6UX41 500 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 CD300LGQ6UXG3 332 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 UNC5DQ6UXZ4 953 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 SPATA19Q7Z5L4 167 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 CCDC91Q7Z6B0 441 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 SIAH3Q8IW03 269 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 FAM219AQ8IW50 185 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 ENTHD1Q8IYW4 607 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 OTUD6BQ8N6M0 293 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 ATAD1Q8NBU5 361 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 GDAP1Q8TB36 358 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 RNF138Q8WVD3 245 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 FAM104AQ969W3 186 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 FAF2Q96CS3 445 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 THUMPD3Q9BV44 507 aaKnown RBP1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 KATNB1Q9BVA0 655 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 ATG10Q9H0Y0 220 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 UBQLN3Q9H347 655 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 TMEM206Q9H813 350 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 NT5DC2Q9H857 520 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 AMBNQ9NP70 447 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 ELOVL2Q9NXB9 296 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 FBXL12Q9NXK8 326 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 SPASTQ9UBP0 616 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 FBXL5Q9UKA1 691 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 MYH7P12883 1935 aa1.79□□□□□ -2.12
HMGB1P18-201ENST00000438801 MYH6P13533 1939 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 SYNJ2BP-COX16A0A087WUM0 186 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 A0A1B0GUS0 222 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 GSTTP1A0A1W2PQM5 241 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 OR5H15A6NDH6 313 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 ZFP92A6NM28 416 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 PRAMEF26H0Y7S4 382 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 PANO1I0J062 215 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 NDC80O14777 642 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 CASKO14936 926 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 MCF2LO15068 1137 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 P2RX6O15547 441 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 TRAPPC3O43617 180 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 B3GALNT1O75752 331 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 RAD51DO75771 328 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 SLU7O95391 586 aaKnown RBP1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 MOCS2O96007 188 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 CSF2P04141 144 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 SFTPBP07988 381 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 ALOX5P09917 674 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 HSPD1P10809 573 aaKnown RBP1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 CCDC130P13994 396 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 PGAM2P15259 253 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 ADORA1P30542 326 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 HPDP32754 393 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 NAMPTP43490 491 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 TDO2P48775 406 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 NDST1P52848 882 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 NUP107P57740 925 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 RPS14P62263 151 aaKnown RBP1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 YWHAHQ04917 246 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 SLMAPQ14BN4 828 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 MORF4L2Q15014 288 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 ZNF674Q2M3X9 581 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 SBK1Q52WX2 424 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 LBHQ53QV2 105 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 CASC4Q6P4E1 433 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 CCDC73Q6ZRK6 1079 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 DNM1P46Q6ZS02 220 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 ZNF444Q8N0Y2 327 aaPredicted RBP1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms