RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 TMEM158Q8WZ71 300 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 PMM1Q92871 262 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 RAB8BQ92930 207 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 ROPN1LQ96C74 230 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 ZBTB18Q99592 522 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 DHRS9Q9BPW9 319 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 SLC35A5Q9BS91 424 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 NAA11Q9BSU3 229 aaPredicted RBP6.84□□□□□ -1.31
VPS50-204ENST00000438395 ROPN1BQ9BZX4 212 aaPredicted RBP6.84□□□□□ -1.31
VPS50-204ENST00000438395 ROPN1Q9HAT0 212 aaPredicted RBP6.84□□□□□ -1.31
VPS50-204ENST00000438395 EXOSC3Q9NQT5 275 aaKnown RBP6.84□□□□□ -1.31
VPS50-204ENST00000438395 CTPS2Q9NRF8 586 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 CBLN4Q9NTU7 201 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 MALT1Q9UDY8 824 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 CDC42EP3Q9UKI2 254 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 ATP23Q9Y6H3 246 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 VPS13CQ709C8 3753 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 TMED7-TICAM2A0A0A6YYA0 188 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 CENPVL1A0A0U1RR11 272 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 FAM234BA2RU67 622 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 WDR91A4D1P6 747 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 E9PBE3 544 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 RGS16O15492 202 aaPredicted RBP6.83□□□□□ -1.32
VPS50-204ENST00000438395 ICMTO60725 284 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 NDUFS7O75251 213 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 PGM3O95394 542 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 WNT11O96014 354 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 CSF3P09919 207 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 NR2F1P10589 423 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 SLC25A16P16260 332 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 CD40P25942 277 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 TTKP33981 857 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 IDH2P48735 452 aaKnown RBP6.83□□□□□ -1.32
VPS50-204ENST00000438395 POLR2HP52434 150 aaKnown RBP6.83□□□□□ -1.32
VPS50-204ENST00000438395 SLC16A1P53985 500 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 COPZ1P61923 177 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 SLC35A1P78382 337 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 TXNL4AP83876 142 aaKnown RBP6.83□□□□□ -1.32
VPS50-204ENST00000438395 KRTAP1-1Q07627 177 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 FAM174BQ3ZCQ3 159 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 C9orf135Q5VTT2 229 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 ZNF544Q6NX49 715 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 EMBQ6PCB8 327 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 SEZ6L2Q6UXD5 910 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 OLIG3Q7RTU3 272 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 HMGN2P46Q86SG4 172 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 ZNF440Q8IYI8 595 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 C17orf78Q8N4C9 275 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 C1orf162Q8NEQ5 155 aaPredicted RBP6.83□□□□□ -1.32
VPS50-204ENST00000438395 OR8J2Q8NGG1 315 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 FAM168AQ92567 244 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 TESCQ96BS2 214 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 NEURL3Q96EH8 262 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 DNAJA3Q96EY1 480 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 PKNOX2Q96KN3 472 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 PANX1Q96RD7 426 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 CCDC106Q9BWC9 280 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 AMBRA1Q9C0C7 1298 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 OR11A1Q9GZK7 315 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 CENPHQ9H3R5 247 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 SERHL2Q9H4I8 314 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 NPAP1Q9NZP6 1156 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 TMEM181Q9P2C4 612 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 ING1Q9UK53 422 aaPredicted RBP6.83□□□□□ -1.32
VPS50-204ENST00000438395 ADAM21Q9UKJ8 722 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 B3GALT5Q9Y2C3 310 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 AMDHD2Q9Y303 409 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 TMED7Q9Y3B3 224 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 RAP2CQ9Y3L5 183 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 FKBP7Q9Y680 259 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 PMF1-BGLAPU3KQ54 211 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 PRR14LQ5THK1 2151 aa6.83□□□□□ -1.32
VPS50-204ENST00000438395 RAI1Q7Z5J4 1906 aaPredicted RBP6.82□□□□□ -1.32
VPS50-204ENST00000438395 IGHV4-30-2A0A087WSY4 118 aa6.82□□□□□ -1.32
VPS50-204ENST00000438395 A0A1W2PR80 420 aa6.82□□□□□ -1.32
VPS50-204ENST00000438395 TMEM247A6NEH6 219 aa6.82□□□□□ -1.32
VPS50-204ENST00000438395 CFAP73A6NFT4 308 aa6.82□□□□□ -1.32
VPS50-204ENST00000438395 ZNF716A6NP11 495 aa6.82□□□□□ -1.32
VPS50-204ENST00000438395 TM9SF1O15321 606 aa6.82□□□□□ -1.32
VPS50-204ENST00000438395 BIRC5O15392 142 aa6.82□□□□□ -1.32
VPS50-204ENST00000438395 DNAJA2O60884 412 aa6.82□□□□□ -1.32
VPS50-204ENST00000438395 SCN2BO60939 215 aa6.82□□□□□ -1.32
VPS50-204ENST00000438395 GPIP06744 558 aa6.82□□□□□ -1.32
VPS50-204ENST00000438395 GUSBP08236 651 aa6.82□□□□□ -1.32
VPS50-204ENST00000438395 IL7RP16871 459 aa6.82□□□□□ -1.32
VPS50-204ENST00000438395 LBPP18428 481 aa6.82□□□□□ -1.32
VPS50-204ENST00000438395 CDH2P19022 906 aaPredicted RBP6.82□□□□□ -1.32
VPS50-204ENST00000438395 HNF1AP20823 631 aa6.82□□□□□ -1.32
VPS50-204ENST00000438395 CXCR1P25024 350 aa6.82□□□□□ -1.32
VPS50-204ENST00000438395 EDNRAP25101 427 aa6.82□□□□□ -1.32
VPS50-204ENST00000438395 TACR3P29371 465 aa6.82□□□□□ -1.32
VPS50-204ENST00000438395 PGM1P36871 562 aa6.82□□□□□ -1.32
VPS50-204ENST00000438395 RPL14P50914 215 aaKnown RBP6.82□□□□□ -1.32
VPS50-204ENST00000438395 MAP2K6P52564 334 aa6.82□□□□□ -1.32
VPS50-204ENST00000438395 PRPS1P60891 318 aa6.82□□□□□ -1.32
VPS50-204ENST00000438395 ABCE1P61221 599 aaKnown RBP6.82□□□□□ -1.32
VPS50-204ENST00000438395 SNRPD2P62316 118 aaKnown RBP6.82□□□□□ -1.32
VPS50-204ENST00000438395 KCNJ10P78508 379 aa6.82□□□□□ -1.32
VPS50-204ENST00000438395 SPOCK1Q08629 439 aa6.82□□□□□ -1.32
VPS50-204ENST00000438395 LRRC74AQ0VAA2 488 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms