RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 CRTC2Q53ET0 693 aaPredicted RBP23.44■■□□□ 1.34
CPNE1-216ENST00000437340 MARCH3Q86UD3 253 aa23.44■■□□□ 1.34
CPNE1-216ENST00000437340 TMEM99Q8N816 258 aa23.44■■□□□ 1.34
CPNE1-216ENST00000437340 FAM98AQ8NCA5 519 aaKnown RBP23.44■■□□□ 1.34
CPNE1-216ENST00000437340 TMEM203Q969S6 136 aa23.44■■□□□ 1.34
CPNE1-216ENST00000437340 RTN4RQ9BZR6 473 aa23.44■■□□□ 1.34
CPNE1-216ENST00000437340 ADGRL4Q9HBW9 690 aa23.44■■□□□ 1.34
CPNE1-216ENST00000437340 ASB6Q9NWX5 421 aa23.44■■□□□ 1.34
CPNE1-216ENST00000437340 BABAM2Q9NXR7 383 aa23.44■■□□□ 1.34
CPNE1-216ENST00000437340 GPR179Q6PRD1 2367 aa23.44■■□□□ 1.34
CPNE1-216ENST00000437340 PNMA8CA0A1B0GUJ8 204 aa23.43■■□□□ 1.34
CPNE1-216ENST00000437340 FADS1O60427 444 aa23.43■■□□□ 1.34
CPNE1-216ENST00000437340 CDC40O60508 579 aaKnown RBP eCLIP23.43■■□□□ 1.34
CPNE1-216ENST00000437340 PGCP20142 388 aa23.43■■□□□ 1.34
CPNE1-216ENST00000437340 GALP22466 123 aa23.43■■□□□ 1.34
CPNE1-216ENST00000437340 TACR3P29371 465 aa23.43■■□□□ 1.34
CPNE1-216ENST00000437340 SLC16A1P53985 500 aa23.43■■□□□ 1.34
CPNE1-216ENST00000437340 C22orf42Q6IC83 251 aa23.43■■□□□ 1.34
CPNE1-216ENST00000437340 CENPSQ8N2Z9 138 aa23.43■■□□□ 1.34
CPNE1-216ENST00000437340 APCDD1LQ8NCL9 501 aa23.43■■□□□ 1.34
CPNE1-216ENST00000437340 OR4K13Q8NH42 304 aa23.43■■□□□ 1.34
CPNE1-216ENST00000437340 OR5W2Q8NH69 310 aa23.43■■□□□ 1.34
CPNE1-216ENST00000437340 NUBPLQ8TB37 319 aa23.43■■□□□ 1.34
CPNE1-216ENST00000437340 SLC25A46Q96AG3 418 aa23.43■■□□□ 1.34
CPNE1-216ENST00000437340 SLC26A1Q9H2B4 701 aa23.43■■□□□ 1.34
CPNE1-216ENST00000437340 MMP25Q9NPA2 562 aa23.43■■□□□ 1.34
CPNE1-216ENST00000437340 TBCCD1Q9NVR7 557 aa23.43■■□□□ 1.34
CPNE1-216ENST00000437340 TOR4AQ9NXH8 423 aa23.43■■□□□ 1.34
CPNE1-216ENST00000437340 HLA-DPB1P04440 258 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 FGF5P12034 268 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 APEHP13798 732 aaKnown RBP23.42■■□□□ 1.34
CPNE1-216ENST00000437340 EGR4Q05215 589 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 LGALS3BPQ08380 585 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 TRA2AQ13595 282 aaKnown RBP eCLIP23.42■■□□□ 1.34
CPNE1-216ENST00000437340 OR10H4Q8NGA5 316 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 COX4I2Q96KJ9 171 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 NANSQ9NR45 359 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 FAIMQ9NVQ4 179 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 YARS2Q9Y2Z4 477 aaKnown RBP23.42■■□□□ 1.34
CPNE1-216ENST00000437340 SLC6A5Q9Y345 797 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 IGHV3-20A0A0C4DH32 117 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 CDRT1O95170 752 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 CLUP10909 449 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 CELP19835 753 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 EVI2BP34910 448 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 EMP2P54851 167 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 RUNX1T1Q06455 604 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 EFR3AQ14156 821 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 IL11RAQ14626 422 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 LCN1P1Q5VSP4 162 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 KLBQ86Z14 1044 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 MISPQ8IVT2 679 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 GPALPP1Q8IXQ4 340 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 SDR9C7Q8NEX9 313 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 ATP6V1C2Q8NEY4 427 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 TIMP4Q99727 224 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 TM9SF2Q99805 663 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 COL25A1Q9BXS0 654 aaPredicted RBP23.42■■□□□ 1.34
CPNE1-216ENST00000437340 BARHL1Q9BZE3 327 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 SNTG1Q9NSN8 517 aa23.42■■□□□ 1.34
CPNE1-216ENST00000437340 WDR87Q6ZQQ6 2873 aa23.41■■□□□ 1.34
CPNE1-216ENST00000437340 hCG_2014768A0A024R1R8 64 aa23.41■■□□□ 1.34
CPNE1-216ENST00000437340 IQCMA0A1B0GVH7 501 aa23.41■■□□□ 1.34
CPNE1-216ENST00000437340 LNP1A1A4G5 178 aa23.41■■□□□ 1.34
CPNE1-216ENST00000437340 NTN3O00634 580 aaPredicted RBP23.41■■□□□ 1.34
CPNE1-216ENST00000437340 ASAH2BP0C7U1 165 aa23.41■■□□□ 1.34
CPNE1-216ENST00000437340 FABP5Q01469 135 aa23.41■■□□□ 1.34
CPNE1-216ENST00000437340 CBFBQ13951 182 aa23.41■■□□□ 1.34
CPNE1-216ENST00000437340 GGTLC2Q14390 218 aa23.41■■□□□ 1.34
CPNE1-216ENST00000437340 PHF19Q5T6S3 580 aa23.41■■□□□ 1.34
CPNE1-216ENST00000437340 ARIH2OSQ8N7S6 290 aa23.41■■□□□ 1.34
CPNE1-216ENST00000437340 POMGNT2Q8NAT1 580 aa23.41■■□□□ 1.34
CPNE1-216ENST00000437340 SMPDL3BQ92485 455 aa23.41■■□□□ 1.34
CPNE1-216ENST00000437340 RNF31Q96EP0 1072 aa23.41■■□□□ 1.34
CPNE1-216ENST00000437340 DDOQ99489 341 aa23.41■■□□□ 1.34
CPNE1-216ENST00000437340 MROQ9BYG7 248 aa23.41■■□□□ 1.34
CPNE1-216ENST00000437340 NDEL1Q9GZM8 345 aa23.41■■□□□ 1.34
CPNE1-216ENST00000437340 TRIM36Q9NQ86 728 aa23.41■■□□□ 1.34
CPNE1-216ENST00000437340 FBXL4Q9UKA2 621 aa23.41■■□□□ 1.34
CPNE1-216ENST00000437340 ADAM18Q9Y3Q7 739 aa23.41■■□□□ 1.34
CPNE1-216ENST00000437340 NPFFR2Q9Y5X5 522 aa23.41■■□□□ 1.34
CPNE1-216ENST00000437340 ASCC3Q8N3C0 2202 aaKnown RBP23.41■■□□□ 1.34
CPNE1-216ENST00000437340 CACNA1HO95180 2353 aa23.41■■□□□ 1.34
CPNE1-216ENST00000437340 CBFA2T3O75081 653 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 MT-ND5P03915 603 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 CD53P19397 219 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 ITPKBP27987 946 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 P2RX1P51575 399 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 FOXL2P58012 376 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 SLC35D3Q5M8T2 416 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 CCDC190Q86UF4 302 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 ZFP41Q8N8Y5 198 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 MINDY2Q8NBR6 621 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 OR8K3Q8NH51 312 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 ZNF524Q96C55 264 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 ISG20L2Q9H9L3 353 aaKnown RBP23.4■■□□□ 1.34
CPNE1-216ENST00000437340 SMURF1Q9HCE7 757 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 ZNF229Q9UJW7 825 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 NOX1Q9Y5S8 564 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 D6RAR5 112 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms