RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 SYT14P1Q58G82 188 aa20.76■□□□□ 0.91
CPSF4-204ENST00000436336 FAM69AQ5T7M9 428 aa20.76■□□□□ 0.91
CPSF4-204ENST00000436336 OR6S1Q8NH40 331 aa20.76■□□□□ 0.91
CPSF4-204ENST00000436336 PTDSS2Q9BVG9 487 aa20.76■□□□□ 0.91
CPSF4-204ENST00000436336 Q9H521 79 aa20.76■□□□□ 0.91
CPSF4-204ENST00000436336 LAMA5O15230 3695 aa20.76■□□□□ 0.91
CPSF4-204ENST00000436336 LOC100130705A0A1B0GUX0 176 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 LRRN3E7EW58 273 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 H3BN98 237 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 SOX14O95416 240 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 CHMP24386 653 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 MAGEA5P43359 124 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 WIPI1Q5MNZ9 446 aaPredicted RBP20.75■□□□□ 0.91
CPSF4-204ENST00000436336 C1QL3Q5VWW1 255 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 OAFQ86UD1 273 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 KIF18BQ86Y91 864 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 FAM109AQ8N4B1 249 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 C10orf53Q8N6V4 93 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 ATP6V1C2Q8NEY4 427 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 FKRPQ9H9S5 495 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 NANSQ9NR45 359 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 IL20Q9NYY1 176 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 ZNF337Q9Y3M9 751 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 ANKRD11Q6UB99 2663 aaPredicted RBP20.75■□□□□ 0.91
CPSF4-204ENST00000436336 H3BML4 177 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 LINC01387J3KSC0 135 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 K7EM74 188 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 MT-ATP6P00846 226 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 BGLAPP02818 100 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 TFPIP10646 304 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 LTBQ06643 244 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 RPL13AP3Q6NVV1 102 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 ZNF620Q6ZNG0 422 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 RBMXL3Q8N7X1 1067 aaKnown RBP20.75■□□□□ 0.91
CPSF4-204ENST00000436336 OR13C2Q8NGS9 318 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 SFXN2Q96NB2 322 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 MOGAT1Q96PD6 335 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 ZNF229Q9UJW7 825 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 SIGLEC7Q9Y286 467 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 CDH10Q9Y6N8 788 aa20.75■□□□□ 0.91
CPSF4-204ENST00000436336 KIAA1549Q9HCM3 1950 aa20.74■□□□□ 0.91
CPSF4-204ENST00000436336 E9PQ18 207 aa20.74■□□□□ 0.91
CPSF4-204ENST00000436336 DENRO43583 198 aaKnown RBP20.74■□□□□ 0.91
CPSF4-204ENST00000436336 HCN1O60741 890 aa20.74■□□□□ 0.91
CPSF4-204ENST00000436336 PEPDP12955 493 aa20.74■□□□□ 0.91
CPSF4-204ENST00000436336 ACADSP16219 412 aa20.74■□□□□ 0.91
CPSF4-204ENST00000436336 EPHA2P29317 976 aa20.74■□□□□ 0.91
CPSF4-204ENST00000436336 RAC1P63000 192 aa20.74■□□□□ 0.91
CPSF4-204ENST00000436336 TAF11Q15544 211 aa20.74■□□□□ 0.91
CPSF4-204ENST00000436336 ARL5BQ96KC2 179 aa20.74■□□□□ 0.91
CPSF4-204ENST00000436336 EGLN3Q9H6Z9 239 aa20.74■□□□□ 0.91
CPSF4-204ENST00000436336 TP53TG5Q9Y2B4 290 aa20.74■□□□□ 0.91
CPSF4-204ENST00000436336 PTP4A3O75365 173 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 RCBTB2O95199 551 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 ASAH2BP0C7U1 165 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 POU1F1P28069 291 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 IDUAP35475 653 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 KEAP1Q14145 624 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 PTGES3Q15185 160 aaKnown RBP20.73■□□□□ 0.91
CPSF4-204ENST00000436336 ANKDD1AQ495B1 522 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 ZBED5Q49AG3 693 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 LRRC17Q8N6Y2 441 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 MFSD8Q8NHS3 518 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 TEX47Q8TBZ9 253 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 FANK1Q8TC84 345 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 OSTF1Q92882 214 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 HRASLS5Q96KN8 279 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 ANKRD60Q9BZ19 345 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 OR52D1Q9H346 318 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 TMEM185BQ9H7F4 350 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 ACKR4Q9NPB9 350 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 HDGFL3Q9Y3E1 203 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 TRAV27A0A087WT01 109 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 IGFBP1P08833 259 aaPredicted RBP20.73■□□□□ 0.91
CPSF4-204ENST00000436336 GFRA1P56159 465 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 SLC10A1Q14973 349 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 MFSD13AQ14CX5 517 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 MAMDC2Q7Z304 686 aaPredicted RBP20.73■□□□□ 0.91
CPSF4-204ENST00000436336 OR51A7Q8NH64 312 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 PITX2Q99697 317 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 PLA2G12AQ9BZM1 189 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 NDRG4Q9ULP0 352 aaKnown RBP20.73■□□□□ 0.91
CPSF4-204ENST00000436336 B3GNT3Q9Y2A9 372 aa20.73■□□□□ 0.91
CPSF4-204ENST00000436336 MED12Q93074 2177 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 GJE1A6NN92 205 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 ZAR1LA6NP61 321 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 FTCDNL1E5RQL4 147 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 BCKDKO14874 412 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 CELA3AP09093 270 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 BMP7P18075 431 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 SFTPDP35247 375 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 NUP107P57740 925 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 RPS4XP62701 263 aaKnown RBP20.72■□□□□ 0.91
CPSF4-204ENST00000436336 PMP22Q01453 160 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 MYBPHQ13203 477 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 FHL1Q13642 323 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 LINC00303Q3SY05 128 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 TMEM176BQ3YBM2 270 aaPredicted RBP20.72■□□□□ 0.91
CPSF4-204ENST00000436336 SMARCD3Q6STE5 483 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 Q6ZPB1 254 aaPredicted RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms