RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 CYHR1Q6ZMK1 362 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 PTOV1Q86YD1 416 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 FRMD1Q8N878 549 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 FAM181AQ8N9Y4 354 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 NUP43Q8NFH3 380 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 OR1J4Q8NGS1 313 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 DYNC2LI1Q8TCX1 351 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 ELP4Q96EB1 424 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 ZNF668Q96K58 619 aaPredicted RBP3.49□□□□□ -1.85
SHPRH-205ENST00000433355 C7orf34Q96L11 122 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 PBDC1Q9BVG4 233 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 LHPPQ9H008 270 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 OR52D1Q9H346 318 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 TUBB1Q9H4B7 451 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 MKL2Q9ULH7 1088 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 WASF3Q9UPY6 502 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 TLX2O43763 284 aaPredicted RBP3.49□□□□□ -1.85
SHPRH-205ENST00000433355 C1QBP02746 253 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 IL5P05113 134 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 IFI30P13284 250 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 LIMS1P48059 325 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 KCNJ3P48549 501 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 PYDC2Q56P42 97 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 NIPAL3Q6P499 406 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 ZNF584Q8IVC4 421 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 ZNF676Q8N7Q3 588 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 CTRCQ99895 268 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 SYT3Q9BQG1 590 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 APOBEC3BQ9UH17 382 aaKnown RBP3.49□□□□□ -1.85
SHPRH-205ENST00000433355 FAM149AA5PLN7 773 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 METTL15A6NJ78 407 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 B4E171 279 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 LALBAP00709 142 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 EVI2BP34910 448 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 PPT1P50897 306 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 MMP16P51512 607 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 CCR4P51679 360 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 ATXN1P54253 815 aaKnown RBP3.49□□□□□ -1.85
SHPRH-205ENST00000433355 TEAD2Q15562 447 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 CTF1Q16619 201 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 RIPPLY2Q5TAB7 128 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 SYT13Q7L8C5 426 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 KRTCAP2Q8N6L1 136 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 C10orf53Q8N6V4 93 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 NANOGP1Q8N7R0 232 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 OR5L1Q8NGL2 311 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 MIB2Q96AX9 1013 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 SLC35A4Q96G79 324 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 ZNF582Q96NG8 517 aaPredicted RBP3.49□□□□□ -1.85
SHPRH-205ENST00000433355 ZFP3Q96NJ6 502 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 OR2A14Q96R47 310 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 SLC46A2Q9BY10 475 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 SLC26A1Q9H2B4 701 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 GHITMQ9H3K2 345 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 SLC52A3Q9NQ40 469 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 PCDHB10Q9UN67 800 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 C14orf166Q9Y224 244 aaKnown RBP3.49□□□□□ -1.85
SHPRH-205ENST00000433355 WIF1Q9Y5W5 379 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 GREM1O60565 184 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 PROS1P07225 676 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 ZNF20P17024 532 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 CD6P30203 668 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 PRSS3P35030 304 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 CDKN2CP42773 168 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 ASCL1P50553 236 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 RPE65Q16518 533 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 PHF19Q5T6S3 580 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 CPNE8Q86YQ8 564 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 CMTM1Q8IZ96 169 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 PGBD5Q8N414 524 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 OR8G5Q8NG78 346 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 SLC39A7Q92504 469 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 SLC41A2Q96JW4 573 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 SLC7A5P2Q9GIP4 190 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 ABCB10Q9NRK6 738 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 TMEM30AQ9NV96 361 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 HMGN4O00479 90 aa3.48□□□□□ -1.85
SHPRH-205ENST00000433355 ATP6V1G1O75348 118 aa3.48□□□□□ -1.85
SHPRH-205ENST00000433355 UGT2B7P16662 529 aa3.48□□□□□ -1.85
SHPRH-205ENST00000433355 ABCD3P28288 659 aa3.48□□□□□ -1.85
SHPRH-205ENST00000433355 CD38P28907 300 aa3.48□□□□□ -1.85
SHPRH-205ENST00000433355 MDH2P40926 338 aaKnown RBP3.48□□□□□ -1.85
SHPRH-205ENST00000433355 NOVA1P51513 510 aaKnown RBP3.48□□□□□ -1.85
SHPRH-205ENST00000433355 RIDAP52758 137 aaKnown RBP3.48□□□□□ -1.85
SHPRH-205ENST00000433355 RAPSNQ13702 412 aa3.48□□□□□ -1.85
SHPRH-205ENST00000433355 THEM4Q5T1C6 240 aa3.48□□□□□ -1.85
SHPRH-205ENST00000433355 PIP5KL1Q5T9C9 394 aa3.48□□□□□ -1.85
SHPRH-205ENST00000433355 PXKQ7Z7A4 578 aa3.48□□□□□ -1.85
SHPRH-205ENST00000433355 PPP1R35Q8TAP8 253 aa3.48□□□□□ -1.85
SHPRH-205ENST00000433355 TSEN15Q8WW01 171 aaKnown RBP3.48□□□□□ -1.85
SHPRH-205ENST00000433355 YIPF6Q96EC8 236 aa3.48□□□□□ -1.85
SHPRH-205ENST00000433355 PWWP2AQ96N64 755 aa3.48□□□□□ -1.85
SHPRH-205ENST00000433355 GPR174Q9BXC1 333 aa3.48□□□□□ -1.85
SHPRH-205ENST00000433355 TGIF2Q9GZN2 237 aa3.48□□□□□ -1.85
SHPRH-205ENST00000433355 WDR76Q9H967 626 aa3.48□□□□□ -1.85
SHPRH-205ENST00000433355 GPR160Q9UJ42 338 aa3.48□□□□□ -1.85
SHPRH-205ENST00000433355 ACSL6Q9UKU0 697 aa3.48□□□□□ -1.85
SHPRH-205ENST00000433355 SLC7A11Q9UPY5 501 aa3.48□□□□□ -1.85
SHPRH-205ENST00000433355 PCDHGA5Q9Y5G8 931 aa3.48□□□□□ -1.85
SHPRH-205ENST00000433355 C2orf78A6NCI8 922 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms