RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 SLC1A3P43003 542 aa15.32■□□□□ 0.04
CNOT9-204ENST00000432877 TXNL4AP83876 142 aaKnown RBP15.32■□□□□ 0.04
CNOT9-204ENST00000432877 C3orf36Q3SXR2 165 aa15.32■□□□□ 0.04
CNOT9-204ENST00000432877 IQCCQ4KMZ1 466 aa15.32■□□□□ 0.04
CNOT9-204ENST00000432877 C9orf135Q5VTT2 229 aa15.32■□□□□ 0.04
CNOT9-204ENST00000432877 OR4F3Q6IEY1 312 aa15.32■□□□□ 0.04
CNOT9-204ENST00000432877 FRRS1Q6ZNA5 592 aa15.32■□□□□ 0.04
CNOT9-204ENST00000432877 KIF18AQ8NI77 898 aa15.32■□□□□ 0.04
CNOT9-204ENST00000432877 ZG16BQ96DA0 208 aa15.32■□□□□ 0.04
CNOT9-204ENST00000432877 FOXN4Q96NZ1 517 aa15.32■□□□□ 0.04
CNOT9-204ENST00000432877 SORCS2Q96PQ0 1159 aa15.32■□□□□ 0.04
CNOT9-204ENST00000432877 KATNB1Q9BVA0 655 aa15.32■□□□□ 0.04
CNOT9-204ENST00000432877 TMEM45AQ9NWC5 275 aa15.32■□□□□ 0.04
CNOT9-204ENST00000432877 OSGIN1Q9UJX0 560 aa15.32■□□□□ 0.04
CNOT9-204ENST00000432877 ANK2Q01484 3957 aa15.31■□□□□ 0.04
CNOT9-204ENST00000432877 OR6C65A6NJZ3 312 aa15.31■□□□□ 0.04
CNOT9-204ENST00000432877 VSTM5A8MXK1 200 aa15.31■□□□□ 0.04
CNOT9-204ENST00000432877 SCN2BO60939 215 aa15.31■□□□□ 0.04
CNOT9-204ENST00000432877 BCAS1O75363 584 aaPredicted RBP15.31■□□□□ 0.04
CNOT9-204ENST00000432877 NUDT17P0C025 328 aa15.31■□□□□ 0.04
CNOT9-204ENST00000432877 IMPDH2P12268 514 aa15.31■□□□□ 0.04
CNOT9-204ENST00000432877 ZNF23P17027 643 aa15.31■□□□□ 0.04
CNOT9-204ENST00000432877 CCNA2P20248 432 aa15.31■□□□□ 0.04
CNOT9-204ENST00000432877 KHKP50053 298 aa15.31■□□□□ 0.04
CNOT9-204ENST00000432877 HPCAP84074 193 aa15.31■□□□□ 0.04
CNOT9-204ENST00000432877 SLC25A3Q00325 362 aa15.31■□□□□ 0.04
CNOT9-204ENST00000432877 GNA13Q14344 377 aa15.31■□□□□ 0.04
CNOT9-204ENST00000432877 GSTA3Q16772 222 aa15.31■□□□□ 0.04
CNOT9-204ENST00000432877 SAXO2Q658L1 398 aa15.31■□□□□ 0.04
CNOT9-204ENST00000432877 OLIG3Q7RTU3 272 aa15.31■□□□□ 0.04
CNOT9-204ENST00000432877 AAED1Q7RTV5 226 aa15.31■□□□□ 0.04
CNOT9-204ENST00000432877 CLEC4FQ8N1N0 589 aa15.31■□□□□ 0.04
CNOT9-204ENST00000432877 RFLNBQ8N5W9 214 aa15.31■□□□□ 0.04
CNOT9-204ENST00000432877 NEURL3Q96EH8 262 aa15.31■□□□□ 0.04
CNOT9-204ENST00000432877 SLC38A2Q96QD8 506 aa15.31■□□□□ 0.04
CNOT9-204ENST00000432877 MECRQ9BV79 373 aa15.31■□□□□ 0.04
CNOT9-204ENST00000432877 RAB1BQ9H0U4 201 aa15.31■□□□□ 0.04
CNOT9-204ENST00000432877 IGHV4-61A0A0C4DH41 118 aa15.3■□□□□ 0.04
CNOT9-204ENST00000432877 TMEM72A0PK05 275 aa15.3■□□□□ 0.04
CNOT9-204ENST00000432877 SKAP2O75563 359 aaPredicted RBP15.3■□□□□ 0.04
CNOT9-204ENST00000432877 CRYAAP02489 173 aa15.3■□□□□ 0.04
CNOT9-204ENST00000432877 GPIP06744 558 aa15.3■□□□□ 0.04
CNOT9-204ENST00000432877 HOXB1P14653 301 aaPredicted RBP15.3■□□□□ 0.04
CNOT9-204ENST00000432877 TACR3P29371 465 aa15.3■□□□□ 0.04
CNOT9-204ENST00000432877 EFNB3Q15768 340 aa15.3■□□□□ 0.04
CNOT9-204ENST00000432877 GPAT3Q53EU6 434 aa15.3■□□□□ 0.04
CNOT9-204ENST00000432877 TNFAIP8L2Q6P589 184 aaPredicted RBP15.3■□□□□ 0.04
CNOT9-204ENST00000432877 UGT2A3Q6UWM9 527 aa15.3■□□□□ 0.04
CNOT9-204ENST00000432877 SLC46A3Q7Z3Q1 461 aa15.3■□□□□ 0.04
CNOT9-204ENST00000432877 RIBC1Q8N443 379 aaPredicted RBP15.3■□□□□ 0.04
CNOT9-204ENST00000432877 FAM169BQ8N8A8 192 aa15.3■□□□□ 0.04
CNOT9-204ENST00000432877 ZIC4Q8N9L1 334 aa15.3■□□□□ 0.04
CNOT9-204ENST00000432877 OR4F15Q8NGB8 312 aa15.3■□□□□ 0.04
CNOT9-204ENST00000432877 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.3■□□□□ 0.04
CNOT9-204ENST00000432877 RAB8BQ92930 207 aa15.3■□□□□ 0.04
CNOT9-204ENST00000432877 DNAJA3Q96EY1 480 aa15.3■□□□□ 0.04
CNOT9-204ENST00000432877 TRNT1Q96Q11 434 aaKnown RBP15.3■□□□□ 0.04
CNOT9-204ENST00000432877 VRK1Q99986 396 aaPredicted RBP15.3■□□□□ 0.04
CNOT9-204ENST00000432877 DPY30Q9C005 99 aa15.3■□□□□ 0.04
CNOT9-204ENST00000432877 MTHFD2LQ9H903 347 aaPredicted RBP15.3■□□□□ 0.04
CNOT9-204ENST00000432877 CA10Q9NS85 328 aa15.3■□□□□ 0.04
CNOT9-204ENST00000432877 IGHV1-18A0A0C4DH31 117 aa15.29■□□□□ 0.04
CNOT9-204ENST00000432877 AGAP5A6NIR3 686 aa15.29■□□□□ 0.04
CNOT9-204ENST00000432877 KRT33AO76009 404 aa15.29■□□□□ 0.04
CNOT9-204ENST00000432877 VAMP5O95183 116 aa15.29■□□□□ 0.04
CNOT9-204ENST00000432877 PPOXP50336 477 aa15.29■□□□□ 0.04
CNOT9-204ENST00000432877 FUT5Q11128 374 aa15.29■□□□□ 0.04
CNOT9-204ENST00000432877 OTUD3Q5T2D3 398 aaPredicted RBP15.29■□□□□ 0.04
CNOT9-204ENST00000432877 ZCCHC23Q6ZST2 131 aa15.29■□□□□ 0.04
CNOT9-204ENST00000432877 ZNF440Q8IYI8 595 aa15.29■□□□□ 0.04
CNOT9-204ENST00000432877 OR9K2Q8NGE7 335 aa15.29■□□□□ 0.04
CNOT9-204ENST00000432877 MAGEE2Q8TD90 523 aaPredicted RBP15.29■□□□□ 0.04
CNOT9-204ENST00000432877 TCP10LQ8TDR4 215 aa15.29■□□□□ 0.04
CNOT9-204ENST00000432877 CNOT9Q92600 299 aaKnown RBP15.29■□□□□ 0.04
CNOT9-204ENST00000432877 HPS1Q92902 700 aa15.29■□□□□ 0.04
CNOT9-204ENST00000432877 TESCQ96BS2 214 aa15.29■□□□□ 0.04
CNOT9-204ENST00000432877 AURKBQ96GD4 344 aaPredicted RBP15.29■□□□□ 0.04
CNOT9-204ENST00000432877 ADAM19Q9H013 955 aa15.29■□□□□ 0.04
CNOT9-204ENST00000432877 PLK3Q9H4B4 646 aa15.29■□□□□ 0.04
CNOT9-204ENST00000432877 SLC17A7Q9P2U7 560 aa15.29■□□□□ 0.04
CNOT9-204ENST00000432877 SVEP1Q4LDE5 3571 aa15.29■□□□□ 0.04
CNOT9-204ENST00000432877 TLDC2A0PJX2 215 aa15.28■□□□□ 0.04
CNOT9-204ENST00000432877 CFAP73A6NFT4 308 aa15.28■□□□□ 0.04
CNOT9-204ENST00000432877 CLDN24A6NM45 220 aa15.28■□□□□ 0.04
CNOT9-204ENST00000432877 KLF11O14901 512 aa15.28■□□□□ 0.04
CNOT9-204ENST00000432877 CPSF4O95639 269 aaKnown RBP15.28■□□□□ 0.04
CNOT9-204ENST00000432877 ERCC1P07992 297 aaPredicted RBP15.28■□□□□ 0.04
CNOT9-204ENST00000432877 OR4A8P0C604 315 aa15.28■□□□□ 0.04
CNOT9-204ENST00000432877 GIFP27352 417 aa15.28■□□□□ 0.04
CNOT9-204ENST00000432877 ARRB2P32121 409 aa15.28■□□□□ 0.04
CNOT9-204ENST00000432877 CHI3L1P36222 383 aaPredicted RBP15.28■□□□□ 0.04
CNOT9-204ENST00000432877 ANXA11P50995 505 aaKnown RBP15.28■□□□□ 0.04
CNOT9-204ENST00000432877 IDH3GP51553 393 aaPredicted RBP15.28■□□□□ 0.04
CNOT9-204ENST00000432877 UBE2NP61088 152 aaKnown RBP15.28■□□□□ 0.04
CNOT9-204ENST00000432877 PLAURQ03405 335 aa15.28■□□□□ 0.04
CNOT9-204ENST00000432877 CASP8Q14790 479 aa15.28■□□□□ 0.04
CNOT9-204ENST00000432877 CARTPTQ16568 116 aa15.28■□□□□ 0.04
CNOT9-204ENST00000432877 DPY19L1Q2PZI1 675 aa15.28■□□□□ 0.04
CNOT9-204ENST00000432877 HIKESHIQ53FT3 197 aa15.28■□□□□ 0.04
CNOT9-204ENST00000432877 ANKRD16Q6P6B7 361 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms