RNA–Protein interactions for RNA: ENST00000431413.5

HERC3-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-206ENST00000431413 C6orf10Q5SRN2 563 aa13.36□□□□□ -0.27
HERC3-206ENST00000431413 C1QTNF12Q5T7M4 302 aa13.36□□□□□ -0.27
HERC3-206ENST00000431413 AGAP6Q5VW22 663 aa13.36□□□□□ -0.27
HERC3-206ENST00000431413 SLC22A25Q6T423 547 aa13.36□□□□□ -0.27
HERC3-206ENST00000431413 PAQR6Q6TCH4 344 aa13.36□□□□□ -0.27
HERC3-206ENST00000431413 OR52N5Q8NH56 324 aa13.36□□□□□ -0.27
HERC3-206ENST00000431413 TAPBPLQ9BX59 468 aa13.36□□□□□ -0.27
HERC3-206ENST00000431413 TPT1P8Q9HAU6 139 aa13.36□□□□□ -0.27
HERC3-206ENST00000431413 SDR39U1Q9NRG7 319 aaPredicted RBP13.36□□□□□ -0.27
HERC3-206ENST00000431413 SHISA9B4DS77 424 aa13.35□□□□□ -0.27
HERC3-206ENST00000431413 C1QCP02747 245 aa13.35□□□□□ -0.27
HERC3-206ENST00000431413 BCHEP06276 602 aa13.35□□□□□ -0.27
HERC3-206ENST00000431413 IMPDH2P12268 514 aa13.35□□□□□ -0.27
HERC3-206ENST00000431413 NCF2P19878 526 aaPredicted RBP13.35□□□□□ -0.27
HERC3-206ENST00000431413 POLR2JP52435 117 aaKnown RBP13.35□□□□□ -0.27
HERC3-206ENST00000431413 NRF1Q16656 503 aa13.35□□□□□ -0.27
HERC3-206ENST00000431413 OTUD3Q5T2D3 398 aaPredicted RBP13.35□□□□□ -0.27
HERC3-206ENST00000431413 WBP2NLQ6ICG8 309 aa13.35□□□□□ -0.27
HERC3-206ENST00000431413 DTX2Q86UW9 622 aa13.35□□□□□ -0.27
HERC3-206ENST00000431413 MIER2Q8N344 545 aa13.35□□□□□ -0.27
HERC3-206ENST00000431413 CADM2Q8N3J6 435 aa13.35□□□□□ -0.27
HERC3-206ENST00000431413 C17orf78Q8N4C9 275 aa13.35□□□□□ -0.27
HERC3-206ENST00000431413 MUS81Q96NY9 551 aa13.35□□□□□ -0.27
HERC3-206ENST00000431413 TRAF4Q9BUZ4 470 aaPredicted RBP13.35□□□□□ -0.27
HERC3-206ENST00000431413 SF3B5Q9BWJ5 86 aaKnown RBP13.35□□□□□ -0.27
HERC3-206ENST00000431413 ADAM19Q9H013 955 aa13.35□□□□□ -0.27
HERC3-206ENST00000431413 SLCO5A1Q9H2Y9 848 aa13.35□□□□□ -0.27
HERC3-206ENST00000431413 RAD21L1Q9H4I0 556 aa13.35□□□□□ -0.27
HERC3-206ENST00000431413 RLIMQ9NVW2 624 aa13.35□□□□□ -0.27
HERC3-206ENST00000431413 NPAP1Q9NZP6 1156 aa13.35□□□□□ -0.27
HERC3-206ENST00000431413 DCTN4Q9UJW0 460 aa13.35□□□□□ -0.27
HERC3-206ENST00000431413 IFT52Q9Y366 437 aa13.35□□□□□ -0.27
HERC3-206ENST00000431413 FLVCR1Q9Y5Y0 555 aa13.35□□□□□ -0.27
HERC3-206ENST00000431413 SLC25A15Q9Y619 301 aa13.35□□□□□ -0.27
HERC3-206ENST00000431413 DSPPQ9NZW4 1301 aa13.35□□□□□ -0.27
HERC3-206ENST00000431413 CSPG4Q6UVK1 2322 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 TLN2Q9Y4G6 2542 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 A0A096LPI6 279 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 A0A0G2JPF8 293 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 HNRNPCL2B2RXH8 293 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 HNRNPCL3B7ZW38 293 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 KLF11O14901 512 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 HNRNPCL1O60812 293 aaKnown RBP13.34□□□□□ -0.27
HERC3-206ENST00000431413 TP53P04637 393 aaPredicted RBP13.34□□□□□ -0.27
HERC3-206ENST00000431413 THBS1P07996 1170 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 TFPTP0C1Z6 253 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 HNRNPCL4P0DMR1 293 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 ETFAP13804 333 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 ZNF83P51522 516 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 MVDP53602 400 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 SLC17A1Q14916 467 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 GABRA6Q16445 453 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 SLC9B1Q4ZJI4 515 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 RNF220Q5VTB9 566 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 TMEM225Q6GV28 225 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 ZNF836Q6ZNA1 936 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 ABHD12BQ7Z5M8 362 aaPredicted RBP13.34□□□□□ -0.27
HERC3-206ENST00000431413 VRK2Q86Y07 508 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 C1orf162Q8NEQ5 155 aaPredicted RBP13.34□□□□□ -0.27
HERC3-206ENST00000431413 OR52E4Q8NGH9 312 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 SLC38A5Q8WUX1 472 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 ADAD1Q96M93 576 aaKnown RBP13.34□□□□□ -0.27
HERC3-206ENST00000431413 REG4Q9BYZ8 158 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 PIF1Q9H611 641 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 AMDHD2Q9Y303 409 aa13.34□□□□□ -0.27
HERC3-206ENST00000431413 FN1P02751 2386 aaKnown RBP13.34□□□□□ -0.27
HERC3-206ENST00000431413 ZC3H12DA2A288 527 aaKnown RBP13.33□□□□□ -0.28
HERC3-206ENST00000431413 LIPT2A6NK58 231 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 A8MVM7 634 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 INAFM1C9JVW0 142 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 RNF223E7ERA6 249 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 M0R1B8 84 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 KRT33AO76009 404 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 VAMP5O95183 116 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 GKN3PP0CG01 181 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 BMP4P12644 408 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 CD40P25942 277 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 NTF4P34130 210 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 STX1BP61266 288 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 CEACAM7Q14002 265 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 OR7A5Q15622 319 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 KLHL24Q6TFL4 600 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 AAED1Q7RTV5 226 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 FBXL14Q8N1E6 418 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 POMGNT2Q8NAT1 580 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 TMEM45BQ96B21 275 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 TLCD1Q96CP7 247 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 DHRS9Q9BPW9 319 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 SPATA9Q9BWV2 254 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 FKRPQ9H9S5 495 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 TMBIM4Q9HC24 238 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 SLC7A10Q9NS82 523 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 SLC6A13Q9NSD5 602 aa13.33□□□□□ -0.28
HERC3-206ENST00000431413 ZNF443Q9Y2A4 671 aaPredicted RBP13.33□□□□□ -0.28
HERC3-206ENST00000431413 CADP27708 2225 aa13.32□□□□□ -0.28
HERC3-206ENST00000431413 JMJD1CQ15652 2540 aa13.32□□□□□ -0.28
HERC3-206ENST00000431413 A0A1W2PR80 420 aa13.32□□□□□ -0.28
HERC3-206ENST00000431413 AQP7P3A6NL99 342 aa13.32□□□□□ -0.28
HERC3-206ENST00000431413 C5orf58C9J3I9 102 aa13.32□□□□□ -0.28
HERC3-206ENST00000431413 AKR7A3O95154 331 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms