RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 A0A1W2PR80 420 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 LIPT2A6NK58 231 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 TMEM229AB2RXF0 380 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 PDLIM1O00151 329 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 DNPH1O43598 174 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 EDF1O60869 148 aaKnown RBP11.03□□□□□ -0.64
SMPD4-204ENST00000430682 NPIPB7O75200 414 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 AKR7A3O95154 331 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 ITGA5P08648 1049 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 CXCR1P25024 350 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 HTR2AP28223 471 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 ATP4BP51164 291 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 SLC35A1P78382 337 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 FADDQ13158 208 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 GNA13Q14344 377 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 SQLEQ14534 574 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 SLC17A1Q14916 467 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 LARS2Q15031 903 aaKnown RBP11.03□□□□□ -0.64
SMPD4-204ENST00000430682 ZNF311Q5JNZ3 666 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 FBXW9Q5XUX1 488 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 WBP2NLQ6ICG8 309 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 ZNF440Q8IYI8 595 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 KBTBD8Q8NFY9 601 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 HSD17B8Q92506 261 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 AKAP1Q92667 903 aaKnown RBP eCLIP11.03□□□□□ -0.64
SMPD4-204ENST00000430682 DDIT4LQ96D03 193 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 PERPQ96FX8 193 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 ZNF385AQ96PM9 386 aaKnown RBP11.03□□□□□ -0.64
SMPD4-204ENST00000430682 CCL19Q99731 98 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 PIP5K1AQ99755 562 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 CPPED1Q9BRF8 314 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-204ENST00000430682 POTEKPQ9BYX7 375 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 SLC7A10Q9NS82 523 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 SEC14L4Q9UDX3 406 aa11.03□□□□□ -0.64
SMPD4-204ENST00000430682 YLPM1P49750 1951 aaKnown RBP11.03□□□□□ -0.64
SMPD4-204ENST00000430682 A0A1W2PP18 115 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 FTCDNL1E5RQL4 147 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 HS3ST1O14792 307 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 TPST2O60704 377 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 RAD51DO75771 328 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 GPX2P18283 190 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 NCF2P19878 526 aaPredicted RBP11.02□□□□□ -0.65
SMPD4-204ENST00000430682 FKBP2P26885 142 aaKnown RBP11.02□□□□□ -0.65
SMPD4-204ENST00000430682 IDUAP35475 653 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 SLC25A3Q00325 362 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 BSPH1Q075Z2 132 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 LGALS3BPQ08380 585 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 CAPRIN1Q14444 709 aaKnown RBP11.02□□□□□ -0.65
SMPD4-204ENST00000430682 OR7A5Q15622 319 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 STK11Q15831 433 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 RUNDC3AQ59EK9 446 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 Q5PR19 223 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 OTUD3Q5T2D3 398 aaPredicted RBP11.02□□□□□ -0.65
SMPD4-204ENST00000430682 GCNT6Q5T4J0 391 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 TSPO2Q5TGU0 170 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 PRAMEF8Q5VWM4 474 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 PRAMEF7Q5VXH5 474 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 CGB2Q6NT52 195 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 C20orf204Q6ZNR8 217 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 PTOV1Q86YD1 416 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 BBS10Q8TAM1 723 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 PIGXQ8TBF5 258 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 PIGTQ969N2 578 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 APH1AQ96BI3 265 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 PTDSS2Q9BVG9 487 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 NPHS2Q9NP85 383 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 FANCFQ9NPI8 374 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 THUMPD1Q9NXG2 353 aaKnown RBP11.02□□□□□ -0.65
SMPD4-204ENST00000430682 EMC3Q9P0I2 261 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 ZNF232Q9UNY5 417 aa11.02□□□□□ -0.65
SMPD4-204ENST00000430682 CHD3Q12873 2000 aaKnown RBP11.01□□□□□ -0.65
SMPD4-204ENST00000430682 IGKV1D-42A0A075B6H8 117 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 AQP7P3A6NL99 342 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 CLOCKO15516 846 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 SMPD2O60906 423 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 SOD3P08294 240 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 DANCRP0C864 163 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 ETS2P15036 469 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 PTH2RP49190 550 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 NR1H2P55055 460 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 RIPPLY3P57055 190 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 CDK6Q00534 326 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 DMTNQ08495 405 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 SF3A3Q12874 501 aaKnown RBP eCLIP11.01□□□□□ -0.651e-6■■■■□ 23.5
SMPD4-204ENST00000430682 FAPQ12884 760 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 PPA1Q15181 289 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 GABRA6Q16445 453 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 C9orf135Q5VTT2 229 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 C1orf140Q5VVS0 124 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 PAQR6Q6TCH4 344 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 P3H2Q8IVL5 708 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 LRRC75A-AS1Q8N1F1 130 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 UBE2J2Q8N2K1 259 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 KDM8Q8N371 416 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 ZNF611Q8N823 705 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 WDR31Q8NA23 367 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 OR52N5Q8NH56 324 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 STON2Q8WXE9 905 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 ZHX1-C8orf76Q96EF9 292 aa11.01□□□□□ -0.65
SMPD4-204ENST00000430682 KTI12Q96EK9 354 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms