RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 PTPMT1Q8WUK0 201 aaPredicted RBP12.53□□□□□ -0.4
THBS3-202ENST00000428962 ZMYND19Q96E35 227 aaPredicted RBP12.53□□□□□ -0.4
THBS3-202ENST00000428962 HSPA12BQ96MM6 686 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 UBL7Q96S82 380 aaPredicted RBP12.53□□□□□ -0.4
THBS3-202ENST00000428962 PHOX2BQ99453 314 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 C11orf54Q9H0W9 315 aaPredicted RBP12.53□□□□□ -0.4
THBS3-202ENST00000428962 NRIP3Q9NQ35 241 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 ZNF221Q9UK13 617 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 RNF215Q9Y6U7 377 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 THADAQ6YHU6 1953 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 TMEM221A6NGB7 291 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 E9PI62 339 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 ZNF264O43296 627 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 DUX1O43812 170 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 SC5DO75845 299 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 PIAS2O75928 621 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 UTS2O95399 124 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 CD1AP06126 327 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 APEX1P27695 318 aaKnown RBP12.53□□□□□ -0.4
THBS3-202ENST00000428962 MAP2K3P46734 347 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 SLC6A8P48029 635 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 DIO1P49895 249 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 CCR4P51679 360 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 E2F1Q01094 437 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 QPRTQ15274 297 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 NKAIN2Q5VXU1 208 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 PXKQ7Z7A4 578 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 ATG4DQ86TL0 474 aaPredicted RBP12.53□□□□□ -0.4
THBS3-202ENST00000428962 PLXDC1Q8IUK5 500 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 RDH10Q8IZV5 341 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 OR5J2Q8NH18 312 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 PHOSPHO1Q8TCT1 267 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 SNX33Q8WV41 574 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 LIPHQ8WWY8 451 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 LCORQ96JN0 433 aaPredicted RBP12.53□□□□□ -0.4
THBS3-202ENST00000428962 PGLYRP3Q96LB9 341 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 CLCA3PQ9Y6N3 262 aa12.53□□□□□ -0.4
THBS3-202ENST00000428962 IGKV3D-11A0A0A0MRZ8 115 aa12.52□□□□□ -0.41
THBS3-202ENST00000428962 C19orf67A6NJJ6 358 aa12.52□□□□□ -0.41
THBS3-202ENST00000428962 SDC3O75056 442 aa12.52□□□□□ -0.41
THBS3-202ENST00000428962 APEHP13798 732 aaKnown RBP12.52□□□□□ -0.41
THBS3-202ENST00000428962 ELAVL1Q15717 326 aaKnown RBP12.52□□□□□ -0.41
THBS3-202ENST00000428962 CDONQ4KMG0 1287 aa12.52□□□□□ -0.41
THBS3-202ENST00000428962 CCDC58Q4VC31 144 aa12.52□□□□□ -0.41
THBS3-202ENST00000428962 SFXN4Q6P4A7 337 aa12.52□□□□□ -0.41
THBS3-202ENST00000428962 JAZF1Q86VZ6 243 aa12.52□□□□□ -0.41
THBS3-202ENST00000428962 LSRQ86X29 649 aaPredicted RBP12.52□□□□□ -0.41
THBS3-202ENST00000428962 GPR135Q8IZ08 494 aa12.52□□□□□ -0.41
THBS3-202ENST00000428962 LRRC17Q8N6Y2 441 aa12.52□□□□□ -0.41
THBS3-202ENST00000428962 ZSCAN1Q8NBB4 408 aa12.52□□□□□ -0.41
THBS3-202ENST00000428962 TP53INP1Q96A56 240 aa12.52□□□□□ -0.41
THBS3-202ENST00000428962 SMIM19Q96E16 107 aa12.52□□□□□ -0.41
THBS3-202ENST00000428962 ZC3HAV1LQ96H79 300 aaKnown RBP12.52□□□□□ -0.41
THBS3-202ENST00000428962 SHDQ96IW2 340 aa12.52□□□□□ -0.41
THBS3-202ENST00000428962 OR8D2Q9GZM6 311 aa12.52□□□□□ -0.41
THBS3-202ENST00000428962 C12orf10Q9HB07 376 aa12.52□□□□□ -0.41
THBS3-202ENST00000428962 MALT1Q9UDY8 824 aa12.52□□□□□ -0.41
THBS3-202ENST00000428962 ST6GALNAC2Q9UJ37 374 aa12.52□□□□□ -0.41
THBS3-202ENST00000428962 HIF3AQ9Y2N7 669 aa12.52□□□□□ -0.41
THBS3-202ENST00000428962 ADAM18Q9Y3Q7 739 aa12.52□□□□□ -0.41
THBS3-202ENST00000428962 IGKV1D-42A0A075B6H8 117 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 MEIOCA2RUB1 952 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 OGG1O15527 345 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 NUDT21O43809 227 aaKnown RBP12.51□□□□□ -0.41
THBS3-202ENST00000428962 ARL6IP5O75915 188 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 TFP02787 698 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 SPI1P17947 270 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 FBLP22087 321 aaKnown RBP12.51□□□□□ -0.41
THBS3-202ENST00000428962 ALAS2P22557 587 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 SHC1P29353 583 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 RBMS1P29558 406 aaKnown RBP12.51□□□□□ -0.41
THBS3-202ENST00000428962 ACVR1BP36896 505 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 CSTF1Q05048 431 aaKnown RBP12.51□□□□□ -0.41
THBS3-202ENST00000428962 KCNAB1Q14722 419 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 CDK5R1Q15078 307 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 CD226Q15762 336 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 KCNJ8Q15842 424 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 ZNF74Q16587 644 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 ACSM3Q53FZ2 586 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 RPL22L1Q6P5R6 122 aaKnown RBP12.51□□□□□ -0.41
THBS3-202ENST00000428962 PLET1Q6UQ28 207 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 NCCRP1Q6ZVX7 275 aaPredicted RBP12.51□□□□□ -0.41
THBS3-202ENST00000428962 SSX6Q7RTT6 188 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 NUP54Q7Z3B4 507 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 C10orf53Q8N6V4 93 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 GATSQ8NAP1 163 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 NPEPL1Q8NDH3 523 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 C17orf47Q8NEP4 570 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 GHSRQ92847 366 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 CLIP3Q96DZ5 547 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 FRMD6Q96NE9 622 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 NMNAT2Q9BZQ4 307 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 NXF5Q9H1B4 397 aaKnown RBP12.51□□□□□ -0.41
THBS3-202ENST00000428962 RNF121Q9H920 327 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 KLHL1Q9NR64 748 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 EXTL2Q9UBQ6 330 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 NCOR1O75376 2440 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 IGHV1OR21-1A0A087WYE8 117 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 TRAV1-2A0A0B4J238 106 aa12.51□□□□□ -0.41
THBS3-202ENST00000428962 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms