RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 C9P02748 559 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 HMGN1P05114 100 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 STSP08842 583 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 CD99P14209 185 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 CPA3P15088 417 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 M6PRP20645 277 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 SAT1P21673 171 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 TEAD1P28347 426 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 HTR1EP28566 365 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 CRABP2P29373 138 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 YBEYP58557 167 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 POLR2GP62487 172 aaKnown RBP eCLIP3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 IL1RL1Q01638 556 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 PLOD1Q02809 727 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 BCL2L1Q07817 233 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 CHAF1BQ13112 559 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 DOC2AQ14183 400 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 EFTUD2Q15029 972 aaKnown RBP eCLIP3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 NCF4Q15080 339 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 ZNF630Q2M218 657 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 SLC25A52Q3SY17 297 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 RESP18Q5W5W9 173 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 PDPK2PQ6A1A2 396 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 ATL3Q6DD88 541 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 RWDD4Q6NW29 188 aaKnown RBP3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 ALKBH5Q6P6C2 394 aaKnown RBP3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 IYDQ6PHW0 289 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 XKRXQ6PP77 449 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 CYP4V2Q6ZWL3 525 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 ENOSF1Q7L5Y1 443 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 CTAGE6Q86UF2 777 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 KCNMB4Q86W47 210 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 CLVS1Q8IUQ0 354 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 THAP8Q8NA92 274 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 TEX47Q8TBZ9 253 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 SLC26A7Q8TE54 656 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 SLC37A2Q8TED4 501 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 CT55Q8WUE5 264 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 NT5C3BQ969T7 300 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 CIDECQ96AQ7 238 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 NUS1Q96E22 293 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 SPACA9Q96E40 222 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 C14orf79Q96F83 325 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 FER1L6-AS2Q96M78 137 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 GBP5Q96PP8 586 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 RANBP9Q96S59 729 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 MLPHQ9BV36 600 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 NUDT9Q9BW91 350 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 CARD6Q9BX69 1037 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 TEX12Q9BXU0 123 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 GHITMQ9H3K2 345 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 XKR8Q9H6D3 395 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 UCK1Q9HA47 277 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 SLC35C2Q9NQQ7 365 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 INIPQ9NRY2 104 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 DDX28Q9NUL7 540 aaKnown RBP3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 HAUS2Q9NVX0 235 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 NDE1Q9NXR1 346 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 OR12D3Q9UGF7 316 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 RARRES3Q9UL19 164 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 PYCARDQ9ULZ3 195 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 SNX7Q9UNH6 387 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 SNX6Q9UNH7 406 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 TMED3Q9Y3Q3 217 aa3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 MN1Q10571 1320 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P5-201ENST00000428894 MAP1AP78559 2803 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 ZNF469Q96JG9 3925 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 SYCE3A1L190 88 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 PSMD11O00231 422 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 TXNL1O43396 289 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 SSX5O60225 188 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 PDE5AO76074 875 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 HSPA4LO95757 839 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 RAB40ALP0C0E4 278 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 DANCRP0C864 163 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 CLUP10909 449 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 F3P13726 295 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 GFAPP14136 432 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 NELFEP18615 380 aaKnown RBP3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 XRCC1P18887 633 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 GPR1P46091 355 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 CSNK1DP48730 415 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 ADARP55265 1226 aaKnown RBP3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 XGP55808 180 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 LRRC63Q05C16 580 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 CUL4AQ13619 759 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 CYTH1Q15438 398 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 HADHQ16836 314 aaKnown RBP3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 ZCWPW2Q504Y3 356 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 PYCR3Q53H96 274 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 CES4AQ5XG92 561 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 KCTD16Q68DU8 428 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 GPR139Q6DWJ6 353 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 Q6ZS92 163 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 FAM183BPQ6ZVS7 135 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 ARCQ7LC44 396 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 CATSPERDQ86XM0 798 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 RAB43Q86YS6 212 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 ZNF595Q8IYB9 648 aa3.89□□□□□ -1.79
HMGB3P5-201ENST00000428894 LRRC34Q8IZ02 419 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms