RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 EXOSC7Q15024 291 aaKnown RBP8.35□□□□□ -1.07
CTNND1-208ENST00000428599 SIX1Q15475 284 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-208ENST00000428599 TBC1D28Q2M2D7 210 aa8.35□□□□□ -1.07
CTNND1-208ENST00000428599 OR2T27Q8NH04 317 aa8.35□□□□□ -1.07
CTNND1-208ENST00000428599 HYLS1Q96M11 299 aa8.35□□□□□ -1.07
CTNND1-208ENST00000428599 ZNF75AQ96N20 296 aa8.35□□□□□ -1.07
CTNND1-208ENST00000428599 CCDC106Q9BWC9 280 aa8.35□□□□□ -1.07
CTNND1-208ENST00000428599 PPIL3Q9H2H8 161 aaKnown RBP8.35□□□□□ -1.07
CTNND1-208ENST00000428599 MARCH5Q9NX47 278 aa8.35□□□□□ -1.07
CTNND1-208ENST00000428599 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-208ENST00000428599 PLEKHM1Q9Y4G2 1056 aa8.35□□□□□ -1.07
CTNND1-208ENST00000428599 PRAMEF27A3QJZ7 478 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 ZNF732B4DXR9 585 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 TUSC2O75896 110 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 CPMP14384 443 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 BCKDHBP21953 392 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 F2RP25116 425 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 SLC5A2P31639 672 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 PCGF2P35227 344 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 SELENOWP63302 87 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 GPR18Q14330 331 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 PEA15Q15121 130 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 PRAMEF9Q5VWM5 478 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 LCN10Q6JVE6 187 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 ZNF585AQ6P3V2 769 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 RANBP10Q6VN20 620 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 GDPD1Q8N9F7 314 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 NANPQ8TBE9 248 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 FNDC8Q8TC99 324 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 CORO2AQ92828 525 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 ITFG2Q969R8 447 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 FUBP1Q96AE4 644 aaKnown RBP8.34□□□□□ -1.07
CTNND1-208ENST00000428599 ZPBPQ9BS86 351 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 CXCL16Q9H2A7 254 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 ZNF443Q9Y2A4 671 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-208ENST00000428599 GPR39O43194 453 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 KCNK2O95069 426 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 MGAT3Q09327 533 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 FAM109AQ8N4B1 249 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 C19orf47Q8N9M1 422 aaKnown RBP8.34□□□□□ -1.07
CTNND1-208ENST00000428599 BEST4Q8NFU0 473 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 CMTM2Q8TAZ6 248 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 RBMXL1Q96E39 390 aaKnown RBP8.34□□□□□ -1.07
CTNND1-208ENST00000428599 NUDT22Q9BRQ3 303 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 SLC25A18Q9H1K4 315 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 LINC01553A4QN01 128 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 KDM4EB2RXH2 506 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-208ENST00000428599 ADAM23O75077 832 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 SNCGO76070 127 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 EDN3P14138 238 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 RAB38P57729 211 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 NCS1P62166 190 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 CTSL3PQ5NE16 218 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 OR5M10Q6IEU7 315 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 CYP4V2Q6ZWL3 525 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-208ENST00000428599 ZNF767PQ75MW2 155 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 PARS2Q7L3T8 475 aaKnown RBP8.34□□□□□ -1.07
CTNND1-208ENST00000428599 SPARTQ8N0X7 666 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 OR7G3Q8NG95 312 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 SLAMF9Q96A28 289 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 ATF6BQ99941 703 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 ZBP1Q9H171 429 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 RPS10P5Q9NQ39 176 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 BIN3Q9NQY0 253 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 INPP5EQ9NRR6 644 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 THSD1Q9NS62 852 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 EHFQ9NZC4 300 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 C4orf47A7E2U8 309 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 F6UZH7 168 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 H3BNC9 293 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 PRRG2O14669 202 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 TYROBPO43914 113 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 SUSD5O60279 629 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 DPM1O60762 260 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 TFP02787 698 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 DRD5P21918 477 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 PTPN6P29350 595 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 ZXDBP98169 803 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 MYBPHQ13203 477 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 MLF2Q15773 248 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-208ENST00000428599 TAZQ16635 292 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 ACTBL2Q562R1 376 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 ELP2Q6IA86 826 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 ZNF322Q6U7Q0 402 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-208ENST00000428599 NPSR1Q6W5P4 371 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 PRSS48Q7RTY5 328 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 HSD11B1LQ7Z5J1 315 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 RTP4Q96DX8 246 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 ZC3HAV1LQ96H79 300 aaKnown RBP8.34□□□□□ -1.07
CTNND1-208ENST00000428599 SLC41A2Q96JW4 573 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 ENPP5Q9UJA9 477 aa8.34□□□□□ -1.07
CTNND1-208ENST00000428599 SPINT2O43291 252 aa8.34□□□□□ -1.08
CTNND1-208ENST00000428599 LCMT2O60294 686 aaKnown RBP8.34□□□□□ -1.08
CTNND1-208ENST00000428599 CDK1P06493 297 aa8.34□□□□□ -1.08
CTNND1-208ENST00000428599 FCGR2AP12318 317 aa8.34□□□□□ -1.08
CTNND1-208ENST00000428599 STT3AP46977 705 aa8.34□□□□□ -1.08
CTNND1-208ENST00000428599 OR1D4P47884 311 aa8.34□□□□□ -1.08
CTNND1-208ENST00000428599 RNF4P78317 190 aa8.34□□□□□ -1.08
CTNND1-208ENST00000428599 PIN1Q13526 163 aaPredicted RBP8.34□□□□□ -1.08
CTNND1-208ENST00000428599 PIP5KL1Q5T9C9 394 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms