RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 STAC2Q6ZMT1 411 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 ATG4DQ86TL0 474 aaPredicted RBP8.13□□□□□ -1.11
SMC1A-203ENST00000428014 CALHM3Q86XJ0 350 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 PTOV1Q86YD1 416 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 CNEP1R1Q8N9A8 125 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 C1orf162Q8NEQ5 155 aaPredicted RBP8.13□□□□□ -1.11
SMC1A-203ENST00000428014 OR5M1Q8NGP8 315 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 PNPT1Q8TCS8 783 aaKnown RBP8.13□□□□□ -1.11
SMC1A-203ENST00000428014 C10orf82Q8WW14 230 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 SLC38A4Q969I6 547 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 C3orf49Q96BT1 292 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 ZNF524Q96C55 264 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 LRRC58Q96CX6 371 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 PIP5K1AQ99755 562 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 HOPXQ9BPY8 73 aaPredicted RBP8.13□□□□□ -1.11
SMC1A-203ENST00000428014 KLHDC3Q9BQ90 382 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 SRXN1Q9BYN0 137 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 SLC19A3Q9BZV2 496 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 AMBRA1Q9C0C7 1298 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 QRSL1Q9H0R6 528 aaKnown RBP8.13□□□□□ -1.11
SMC1A-203ENST00000428014 SLAMF8Q9P0V8 285 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 SLC9A8Q9Y2E8 581 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 TMED7Q9Y3B3 224 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 CORINQ9Y5Q5 1042 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 CAPN7Q9Y6W3 813 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 OTOGQ6ZRI0 2925 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 FREM1Q5H8C1 2179 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 LIPT2A6NK58 231 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 AQP7P3A6NL99 342 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 CLDN24A6NM45 220 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 SHISA8B8ZZ34 492 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 FXYD1O00168 92 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 GCM2O75603 506 aaPredicted RBP8.12□□□□□ -1.11
SMC1A-203ENST00000428014 CYP7B1O75881 506 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 LGI1O95970 557 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 HRGP04196 525 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 THRBP10828 461 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 CD1EP15812 388 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 CXCR1P25024 350 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 SHC1P29353 583 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 CCKARP32238 428 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 IDUAP35475 653 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 GZMMP51124 257 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 NFYCQ13952 458 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 SLC17A1Q14916 467 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 STK11Q15831 433 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 NRF1Q16656 503 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 VMACQ2NL98 169 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 NDUFAF6Q330K2 333 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 SPATS1Q496A3 300 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 BEX5Q5H9J7 111 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 SFRP5Q5T4F7 317 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 FAM69AQ5T7M9 428 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 OR7E24Q6IFN5 339 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 NANOGP8Q6NSW7 305 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 CGB2Q6NT52 195 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 LUZP2Q86TE4 346 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 RANBP3LQ86VV4 465 aaPredicted RBP8.12□□□□□ -1.11
SMC1A-203ENST00000428014 C17orf78Q8N4C9 275 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 SCAIQ8N9R8 606 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 ZNF610Q8N9Z0 462 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 ABHD3Q8WU67 409 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 HSD17B8Q92506 261 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 SLC47A1Q96FL8 570 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 MPP4Q96JB8 637 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 ALPK1Q96QP1 1244 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 OR5B2Q96R09 309 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 EPYCQ99645 322 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 FOXC2Q99958 501 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 TMEM43Q9BTV4 400 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 GRIP2Q9C0E4 1043 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 CLEC4MQ9H2X3 399 aaPredicted RBP8.12□□□□□ -1.11
SMC1A-203ENST00000428014 NANOGQ9H9S0 305 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 OBP2BQ9NPH6 170 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.12□□□□□ -1.11
SMC1A-203ENST00000428014 RCE1Q9Y256 329 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 RASD1Q9Y272 281 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 B3GALT5Q9Y2C3 310 aa8.12□□□□□ -1.11
SMC1A-203ENST00000428014 A0A087WUJ7 227 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 A0A0B4J2E0 115 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 A0A1B0GX12 115 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 FTCDNL1E5RQL4 147 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 FBP2O00757 339 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 MGRN1O60291 552 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 SMNDC1O75940 238 aaKnown RBP eCLIP8.11□□□□□ -1.11
SMC1A-203ENST00000428014 MT-ATP6P00846 226 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 C1QCP02747 245 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 RYKP34925 604 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 KCNJ5P48544 419 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 GUCY1A3Q02108 690 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 TGFBR3Q03167 851 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 CYP51A1Q16850 503 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 C3orf36Q3SXR2 165 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 TIMM23BQ5SRD1 257 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 FBXW9Q5XUX1 488 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 C8orf82Q6P1X6 216 aaPredicted RBP8.11□□□□□ -1.11
SMC1A-203ENST00000428014 LINC00114Q6XXX2 140 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 C20orf204Q6ZNR8 217 aa8.11□□□□□ -1.11
SMC1A-203ENST00000428014 ABHD12BQ7Z5M8 362 aaPredicted RBP8.11□□□□□ -1.11
SMC1A-203ENST00000428014 CDH24Q86UP0 819 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms