RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 IDUAP35475 653 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 MRPL19P49406 292 aaKnown RBP16.23■□□□□ 0.19
PSPC1-202ENST00000427943 FOXG1P55316 489 aaPredicted RBP16.23■□□□□ 0.19
PSPC1-202ENST00000427943 FAPQ12884 760 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 CEACAM7Q14002 265 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 OR7A5Q15622 319 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 TIMM23BQ5SRD1 257 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 OTUD3Q5T2D3 398 aaPredicted RBP16.23■□□□□ 0.19
PSPC1-202ENST00000427943 WBP2NLQ6ICG8 309 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 SERPINA11Q86U17 422 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 MSRB3Q8IXL7 192 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 OR52E4Q8NGH9 312 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 FBXW5Q969U6 566 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 MUCL1Q96DR8 90 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 SPDL1Q96EA4 605 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 NAA11Q9BSU3 229 aaPredicted RBP16.23■□□□□ 0.19
PSPC1-202ENST00000427943 CCDC28BQ9BUN5 200 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 SPATA9Q9BWV2 254 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 RAD21L1Q9H4I0 556 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 CXorf56Q9H5V9 222 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 A4GALTQ9NPC4 353 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 THUMPD1Q9NXG2 353 aaKnown RBP16.23■□□□□ 0.19
PSPC1-202ENST00000427943 NPAP1Q9NZP6 1156 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 FLVCR1Q9Y5Y0 555 aa16.23■□□□□ 0.19
PSPC1-202ENST00000427943 HEATR1Q9H583 2144 aaKnown RBP16.22■□□□□ 0.19
PSPC1-202ENST00000427943 A0A1W2PR80 420 aa16.22■□□□□ 0.19
PSPC1-202ENST00000427943 CIB4A0PJX0 185 aa16.22■□□□□ 0.19
PSPC1-202ENST00000427943 OR5H1A6NKK0 313 aa16.22■□□□□ 0.19
PSPC1-202ENST00000427943 CCT8L1PA6NM43 557 aa16.22■□□□□ 0.19
PSPC1-202ENST00000427943 SMAD7O15105 426 aaKnown RBP16.22■□□□□ 0.19
PSPC1-202ENST00000427943 EIF1BO60739 113 aaKnown RBP16.22■□□□□ 0.19
PSPC1-202ENST00000427943 AKR7A3O95154 331 aa16.22■□□□□ 0.19
PSPC1-202ENST00000427943 COPZ1P61923 177 aa16.22■□□□□ 0.19
PSPC1-202ENST00000427943 RPS4XP62701 263 aaKnown RBP16.22■□□□□ 0.19
PSPC1-202ENST00000427943 HOXC5Q00444 222 aa16.22■□□□□ 0.19
PSPC1-202ENST00000427943 FADDQ13158 208 aa16.22■□□□□ 0.19
PSPC1-202ENST00000427943 ZNF311Q5JNZ3 666 aa16.22■□□□□ 0.19
PSPC1-202ENST00000427943 PAGE3Q5JUK9 113 aa16.22■□□□□ 0.19
PSPC1-202ENST00000427943 C9orf135Q5VTT2 229 aa16.22■□□□□ 0.19
PSPC1-202ENST00000427943 BLOC1S3Q6QNY0 202 aa16.22■□□□□ 0.19
PSPC1-202ENST00000427943 PRSS57Q6UWY2 283 aa16.22■□□□□ 0.19
PSPC1-202ENST00000427943 C10orf111Q8N326 155 aa16.22■□□□□ 0.19
PSPC1-202ENST00000427943 OR52N5Q8NH56 324 aa16.22■□□□□ 0.19
PSPC1-202ENST00000427943 THOC1Q96FV9 657 aaKnown RBP16.22■□□□□ 0.19
PSPC1-202ENST00000427943 ASB6Q9NWX5 421 aa16.22■□□□□ 0.19
PSPC1-202ENST00000427943 SLAMF8Q9P0V8 285 aa16.22■□□□□ 0.19
PSPC1-202ENST00000427943 MALT1Q9UDY8 824 aa16.22■□□□□ 0.19
PSPC1-202ENST00000427943 ZNF232Q9UNY5 417 aa16.22■□□□□ 0.19
PSPC1-202ENST00000427943 SLC9A8Q9Y2E8 581 aa16.22■□□□□ 0.19
PSPC1-202ENST00000427943 LIPT2A6NK58 231 aa16.21■□□□□ 0.19
PSPC1-202ENST00000427943 PGM3O95394 542 aa16.21■□□□□ 0.19
PSPC1-202ENST00000427943 GPIP06744 558 aa16.21■□□□□ 0.19
PSPC1-202ENST00000427943 SOD3P08294 240 aa16.21■□□□□ 0.19
PSPC1-202ENST00000427943 ITGA5P08648 1049 aa16.21■□□□□ 0.19
PSPC1-202ENST00000427943 BMP2P12643 396 aa16.21■□□□□ 0.19
PSPC1-202ENST00000427943 HOXB4P17483 251 aaPredicted RBP16.21■□□□□ 0.19
PSPC1-202ENST00000427943 MAP2K6P52564 334 aa16.21■□□□□ 0.19
PSPC1-202ENST00000427943 SLC17A1Q14916 467 aa16.21■□□□□ 0.19
PSPC1-202ENST00000427943 ZNF672Q499Z4 452 aaPredicted RBP16.21■□□□□ 0.19
PSPC1-202ENST00000427943 AGKQ53H12 422 aa16.21■□□□□ 0.19
PSPC1-202ENST00000427943 LRIF1Q5T3J3 769 aa16.21■□□□□ 0.19
PSPC1-202ENST00000427943 PAQR6Q6TCH4 344 aa16.21■□□□□ 0.19
PSPC1-202ENST00000427943 CLEC9AQ6UXN8 241 aa16.21■□□□□ 0.19
PSPC1-202ENST00000427943 TMEM99Q8N816 258 aa16.21■□□□□ 0.19
PSPC1-202ENST00000427943 NFKBIDQ8NI38 313 aa16.21■□□□□ 0.19
PSPC1-202ENST00000427943 BBS10Q8TAM1 723 aa16.21■□□□□ 0.19
PSPC1-202ENST00000427943 C3orf49Q96BT1 292 aa16.21■□□□□ 0.19
PSPC1-202ENST00000427943 COX4I2Q96KJ9 171 aa16.21■□□□□ 0.19
PSPC1-202ENST00000427943 ZNF701Q9NV72 531 aaPredicted RBP16.21■□□□□ 0.19
PSPC1-202ENST00000427943 INTS9Q9NV88 658 aaKnown RBP16.21■□□□□ 0.19
PSPC1-202ENST00000427943 TAS2R16Q9NYV7 291 aa16.21■□□□□ 0.19
PSPC1-202ENST00000427943 VAPAQ9P0L0 249 aa16.21■□□□□ 0.19
PSPC1-202ENST00000427943 IFT52Q9Y366 437 aa16.21■□□□□ 0.19
PSPC1-202ENST00000427943 NSD1Q96L73 2696 aaPredicted RBP16.2■□□□□ 0.18
PSPC1-202ENST00000427943 A0A1W2PP18 115 aa16.2■□□□□ 0.18
PSPC1-202ENST00000427943 C5orf58C9J3I9 102 aa16.2■□□□□ 0.18
PSPC1-202ENST00000427943 ATP5J2P56134 94 aa16.2■□□□□ 0.18
PSPC1-202ENST00000427943 TAPBPLQ9BX59 468 aa16.2■□□□□ 0.18
PSPC1-202ENST00000427943 TRIM2Q9C040 744 aa16.2■□□□□ 0.18
PSPC1-202ENST00000427943 ARMC7Q9H6L4 198 aa16.2■□□□□ 0.18
PSPC1-202ENST00000427943 BCL2L10Q9HD36 194 aa16.2■□□□□ 0.18
PSPC1-202ENST00000427943 SLC52A3Q9NQ40 469 aa16.2■□□□□ 0.18
PSPC1-202ENST00000427943 SLC7A10Q9NS82 523 aa16.2■□□□□ 0.18
PSPC1-202ENST00000427943 ADPRHL2Q9NX46 363 aa16.2■□□□□ 0.18
PSPC1-202ENST00000427943 UPB1Q9UBR1 384 aa16.2■□□□□ 0.18
PSPC1-202ENST00000427943 MAGED1Q9Y5V3 778 aaPredicted RBP16.2■□□□□ 0.18
PSPC1-202ENST00000427943 AQP7P3A6NL99 342 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 A8MVM7 634 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 HMGB1P1B2RPK0 211 aaPredicted RBP16.19■□□□□ 0.18
PSPC1-202ENST00000427943 TMEM229AB2RXF0 380 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 SHISA9B4DS77 424 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 ABCD4O14678 606 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 DANCRP0C864 163 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 ARAFP10398 606 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 PAX1P15863 534 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 CDKN1AP38936 164 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 ZNF83P51522 516 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 CDH11P55287 796 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 LTBQ06643 244 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 SPOCK1Q08629 439 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms