RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 RNF115Q9Y4L5 304 aa16.29■□□□□ 0.2
GPC1-205ENST00000427506 ITPR3Q14573 2671 aa16.29■□□□□ 0.2
GPC1-205ENST00000427506 A0A1W2PP18 115 aa16.28■□□□□ 0.2
GPC1-205ENST00000427506 CIB4A0PJX0 185 aa16.28■□□□□ 0.2
GPC1-205ENST00000427506 A8MVM7 634 aa16.28■□□□□ 0.2
GPC1-205ENST00000427506 HS3ST1O14792 307 aa16.28■□□□□ 0.2
GPC1-205ENST00000427506 FRS3O43559 492 aa16.28■□□□□ 0.2
GPC1-205ENST00000427506 ADSLP30566 484 aaPredicted RBP16.28■□□□□ 0.2
GPC1-205ENST00000427506 FAPQ12884 760 aa16.28■□□□□ 0.2
GPC1-205ENST00000427506 Q5PR19 223 aa16.28■□□□□ 0.2
GPC1-205ENST00000427506 NCMAPQ5T1S8 102 aa16.28■□□□□ 0.2
GPC1-205ENST00000427506 PAQR6Q6TCH4 344 aa16.28■□□□□ 0.2
GPC1-205ENST00000427506 KRT73Q86Y46 540 aa16.28■□□□□ 0.2
GPC1-205ENST00000427506 ZNF433Q8N7K0 673 aaPredicted RBP16.28■□□□□ 0.2
GPC1-205ENST00000427506 TMEM171Q8WVE6 324 aa16.28■□□□□ 0.2
GPC1-205ENST00000427506 TMEM204Q9BSN7 226 aa16.28■□□□□ 0.2
GPC1-205ENST00000427506 SPATA5L1Q9BVQ7 753 aa16.28■□□□□ 0.2
GPC1-205ENST00000427506 NPHS2Q9NP85 383 aa16.28■□□□□ 0.2
GPC1-205ENST00000427506 SLC52A3Q9NQ40 469 aa16.28■□□□□ 0.2
GPC1-205ENST00000427506 PARPBPQ9NWS1 579 aa16.28■□□□□ 0.2
GPC1-205ENST00000427506 ASB6Q9NWX5 421 aa16.28■□□□□ 0.2
GPC1-205ENST00000427506 UPB1Q9UBR1 384 aa16.28■□□□□ 0.2
GPC1-205ENST00000427506 RPS6KB2Q9UBS0 482 aa16.28■□□□□ 0.2
GPC1-205ENST00000427506 TRIM33Q9UPN9 1127 aa16.28■□□□□ 0.2
GPC1-205ENST00000427506 CORO2BQ9UQ03 480 aa16.28■□□□□ 0.2
GPC1-205ENST00000427506 SLC9A8Q9Y2E8 581 aa16.28■□□□□ 0.2
GPC1-205ENST00000427506 CHST2Q9Y4C5 530 aa16.28■□□□□ 0.2
GPC1-205ENST00000427506 LIPT2A6NK58 231 aa16.27■□□□□ 0.2
GPC1-205ENST00000427506 RAD51DO75771 328 aa16.27■□□□□ 0.2
GPC1-205ENST00000427506 AKR7A3O95154 331 aa16.27■□□□□ 0.2
GPC1-205ENST00000427506 ARAFP10398 606 aa16.27■□□□□ 0.2
GPC1-205ENST00000427506 ETS2P15036 469 aa16.27■□□□□ 0.2
GPC1-205ENST00000427506 FOSL1P15407 271 aa16.27■□□□□ 0.2
GPC1-205ENST00000427506 COX5AP20674 150 aa16.27■□□□□ 0.2
GPC1-205ENST00000427506 HOXC5Q00444 222 aa16.27■□□□□ 0.2
GPC1-205ENST00000427506 CDK6Q00534 326 aa16.27■□□□□ 0.2
GPC1-205ENST00000427506 TIMM23BQ5SRD1 257 aa16.27■□□□□ 0.2
GPC1-205ENST00000427506 REEP3Q6NUK4 255 aa16.27■□□□□ 0.2
GPC1-205ENST00000427506 P2RY8Q86VZ1 359 aa16.27■□□□□ 0.2
GPC1-205ENST00000427506 TMEM99Q8N816 258 aa16.27■□□□□ 0.2
GPC1-205ENST00000427506 ZNF611Q8N823 705 aa16.27■□□□□ 0.2
GPC1-205ENST00000427506 ADPRHL2Q9NX46 363 aa16.27■□□□□ 0.2
GPC1-205ENST00000427506 LEF1Q9UJU2 399 aaPredicted RBP16.27■□□□□ 0.2
GPC1-205ENST00000427506 FLVCR1Q9Y5Y0 555 aa16.27■□□□□ 0.2
GPC1-205ENST00000427506 EDF1O60869 148 aaKnown RBP16.26■□□□□ 0.19
GPC1-205ENST00000427506 SASH3O75995 380 aa16.26■□□□□ 0.19
GPC1-205ENST00000427506 SLC6A2P23975 617 aa16.26■□□□□ 0.19
GPC1-205ENST00000427506 NTF4P34130 210 aa16.26■□□□□ 0.19
GPC1-205ENST00000427506 BSPH1Q075Z2 132 aa16.26■□□□□ 0.19
GPC1-205ENST00000427506 SCARB2Q14108 478 aa16.26■□□□□ 0.19
GPC1-205ENST00000427506 SLC17A1Q14916 467 aa16.26■□□□□ 0.19
GPC1-205ENST00000427506 C1orf140Q5VVS0 124 aa16.26■□□□□ 0.19
GPC1-205ENST00000427506 TMEM225Q6GV28 225 aa16.26■□□□□ 0.19
GPC1-205ENST00000427506 SSX8Q7RTT4 187 aa16.26■□□□□ 0.19
GPC1-205ENST00000427506 ATG4DQ86TL0 474 aaPredicted RBP16.26■□□□□ 0.19
GPC1-205ENST00000427506 GPAT4Q86UL3 456 aa16.26■□□□□ 0.19
GPC1-205ENST00000427506 KRTAP1-3Q8IUG1 177 aa16.26■□□□□ 0.19
GPC1-205ENST00000427506 C10orf111Q8N326 155 aa16.26■□□□□ 0.19
GPC1-205ENST00000427506 STON2Q8WXE9 905 aa16.26■□□□□ 0.19
GPC1-205ENST00000427506 C3orf49Q96BT1 292 aa16.26■□□□□ 0.19
GPC1-205ENST00000427506 CXorf56Q9H5V9 222 aa16.26■□□□□ 0.19
GPC1-205ENST00000427506 TAS2R16Q9NYV7 291 aa16.26■□□□□ 0.19
GPC1-205ENST00000427506 NDUFAF1Q9Y375 327 aa16.26■□□□□ 0.19
GPC1-205ENST00000427506 TRBV5-3A0A0A0MS03 114 aa16.25■□□□□ 0.19
GPC1-205ENST00000427506 A0A0G2JND7 137 aa16.25■□□□□ 0.19
GPC1-205ENST00000427506 OR5H1A6NKK0 313 aa16.25■□□□□ 0.19
GPC1-205ENST00000427506 ELOA3DA6NLF2 546 aaPredicted RBP16.25■□□□□ 0.19
GPC1-205ENST00000427506 ANGPT2O15123 496 aa16.25■□□□□ 0.19
GPC1-205ENST00000427506 GPX2P18283 190 aa16.25■□□□□ 0.19
GPC1-205ENST00000427506 PRKAR1BP31321 381 aa16.25■□□□□ 0.19
GPC1-205ENST00000427506 ELOA3BQ3SY89 546 aa16.25■□□□□ 0.19
GPC1-205ENST00000427506 YTHDF3Q7Z739 585 aaKnown RBP16.25■□□□□ 0.19
GPC1-205ENST00000427506 ELOA3Q8NG57 546 aa16.25■□□□□ 0.19
GPC1-205ENST00000427506 OR52E4Q8NGH9 312 aa16.25■□□□□ 0.19
GPC1-205ENST00000427506 SLC35B4Q969S0 331 aa16.25■□□□□ 0.19
GPC1-205ENST00000427506 FBXW5Q969U6 566 aa16.25■□□□□ 0.19
GPC1-205ENST00000427506 ZNF607Q96SK3 696 aa16.25■□□□□ 0.19
GPC1-205ENST00000427506 SIKE1Q9BRV8 207 aa16.25■□□□□ 0.19
GPC1-205ENST00000427506 SF3B5Q9BWJ5 86 aaKnown RBP16.25■□□□□ 0.19
GPC1-205ENST00000427506 IKZF5Q9H5V7 419 aa16.25■□□□□ 0.19
GPC1-205ENST00000427506 DLL4Q9NR61 685 aa16.25■□□□□ 0.19
GPC1-205ENST00000427506 MALT1Q9UDY8 824 aa16.25■□□□□ 0.19
GPC1-205ENST00000427506 SLC13A4Q9UKG4 626 aa16.25■□□□□ 0.19
GPC1-205ENST00000427506 DPRXA6NFQ7 191 aa16.24■□□□□ 0.19
GPC1-205ENST00000427506 AQP7P3A6NL99 342 aa16.24■□□□□ 0.19
GPC1-205ENST00000427506 AHSA1O95433 338 aa16.24■□□□□ 0.19
GPC1-205ENST00000427506 GTF2E2P29084 291 aaKnown RBP16.24■□□□□ 0.19
GPC1-205ENST00000427506 PTH2RP49190 550 aa16.24■□□□□ 0.19
GPC1-205ENST00000427506 NCALDP61601 193 aa16.24■□□□□ 0.19
GPC1-205ENST00000427506 RUNDC3AQ59EK9 446 aa16.24■□□□□ 0.19
GPC1-205ENST00000427506 C9orf135Q5VTT2 229 aa16.24■□□□□ 0.19
GPC1-205ENST00000427506 ADAM5Q6NVV9 412 aa16.24■□□□□ 0.19
GPC1-205ENST00000427506 DLEU7Q6UYE1 221 aa16.24■□□□□ 0.19
GPC1-205ENST00000427506 AAED1Q7RTV5 226 aa16.24■□□□□ 0.19
GPC1-205ENST00000427506 DHDDSQ86SQ9 333 aa16.24■□□□□ 0.19
GPC1-205ENST00000427506 OR9K2Q8NGE7 335 aa16.24■□□□□ 0.19
GPC1-205ENST00000427506 OR52N5Q8NH56 324 aa16.24■□□□□ 0.19
GPC1-205ENST00000427506 LILRB1Q8NHL6 650 aaPredicted RBP16.24■□□□□ 0.19
GPC1-205ENST00000427506 STK35Q8TDR2 534 aa16.24■□□□□ 0.19
GPC1-205ENST00000427506 SLC25A36Q96CQ1 311 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms