RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 ALOXE3Q9BYJ1 711 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 TMEM269A0A1B0GVZ9 245 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 FKBP2P26885 142 aaKnown RBP13.51□□□□□ -0.25
PTPN13-203ENST00000427191 GABRB3P28472 473 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 STEAP3Q658P3 488 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 ZNF852Q6ZMS4 543 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 RETREG3Q86VR2 466 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 ST7LQ8TDW4 575 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 LRRC30A6NM36 301 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 S100A8P05109 93 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 ITGB7P26010 798 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 AHRP35869 848 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 ETV4P43268 484 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 RHOXF1Q8NHV9 184 aa13.51□□□□□ -0.25
PTPN13-203ENST00000427191 TCRBV3S1A0A5B6 114 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 HLA-DMAP28067 261 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 P2RY14Q15391 338 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 SLC36A2Q495M3 483 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 ZNF705AQ6ZN79 300 aaPredicted RBP13.5□□□□□ -0.25
PTPN13-203ENST00000427191 GTF2H5Q6ZYL4 71 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 OR10K1Q8NGX5 313 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 TRAF3IP2O43734 574 aaPredicted RBP13.5□□□□□ -0.25
PTPN13-203ENST00000427191 SERPINA2P20848 420 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 MTNR1BP49286 362 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 HRASLSQ9HDD0 168 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 SLAMF7Q9NQ25 335 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 IGSF5Q9NSI5 407 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 VAPAQ9P0L0 249 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 XKRY2A2RUG3 117 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 GABRPO00591 440 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 ERVPABLB-1P60509 514 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 CATSPERDQ86XM0 798 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 FAM217AQ8IXS0 508 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 DCLRE1CQ96SD1 692 aaKnown RBP13.5□□□□□ -0.25
PTPN13-203ENST00000427191 GPR174Q9BXC1 333 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 C1orf198Q9H425 327 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 COPS3Q9UNS2 423 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 ANKRD36CQ5JPF3 1778 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 NAGAP17050 411 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 ANXA7P20073 488 aaKnown RBP13.5□□□□□ -0.25
PTPN13-203ENST00000427191 ARG2P78540 354 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 DBX2Q6ZNG2 339 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 TCTN2Q96GX1 697 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 MAP3K3Q99759 626 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 CRB3Q9BUF7 120 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 SEMA4CQ9C0C4 833 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 PRAMEF26H0Y7S4 382 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 VIPR2P41587 438 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 BAXQ07812 192 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 PLK5Q496M5 336 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 FAM180BQ6P0A1 224 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 OGFOD3Q6PK18 319 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 ARV1Q9H2C2 271 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 MUTYHQ9UIF7 546 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 PUS1Q9Y606 427 aaKnown RBP eCLIP13.5□□□□□ -0.25
PTPN13-203ENST00000427191 ANTXRLA6NF34 631 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 LAMTOR5O43504 91 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 ZNF888P0CJ79 500 aaPredicted RBP13.5□□□□□ -0.25
PTPN13-203ENST00000427191 OR7G3Q8NG95 312 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 FAM213BQ8TBF2 198 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 OBP2BQ9NPH6 170 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 KPTNQ9Y664 436 aa13.5□□□□□ -0.25
PTPN13-203ENST00000427191 LALBAP00709 142 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 LINC01599Q8WXQ3 324 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 CDS1Q92903 461 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 PRR11Q96HE9 360 aaPredicted RBP13.49□□□□□ -0.25
PTPN13-203ENST00000427191 KIRREL1Q96J84 757 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 ZNF840PA6NDX5 716 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 SCG5P05408 212 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 TRAPPC2P0DI81 140 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 TRAPPC2BP0DI82 140 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 HOXD11P31277 338 aaPredicted RBP13.49□□□□□ -0.25
PTPN13-203ENST00000427191 CPXM2Q8N436 756 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 DTX3Q8N9I9 347 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 LYSMD1Q96S90 227 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 SPATA6Q9NWH7 488 aaPredicted RBP13.49□□□□□ -0.25
PTPN13-203ENST00000427191 WASH4PA8MWX3 477 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 SEMA4FO95754 770 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 OR7A5Q15622 319 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 PET117Q6UWS5 81 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 ADGRG3Q86Y34 549 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 MMP21Q8N119 569 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 NAGSQ8N159 534 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 INTS12Q96CB8 462 aaKnown RBP13.49□□□□□ -0.25
PTPN13-203ENST00000427191 ZNF331Q9NQX6 463 aaPredicted RBP13.49□□□□□ -0.25
PTPN13-203ENST00000427191 A3GALT2U3KPV4 340 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 DRD1P21728 446 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 HTR2CP28335 458 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 CSN1S1P47710 185 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 SEC61A1P61619 476 aaKnown RBP13.49□□□□□ -0.25
PTPN13-203ENST00000427191 RPS26P11Q5JNZ5 115 aaPredicted RBP13.49□□□□□ -0.25
PTPN13-203ENST00000427191 SYT13Q7L8C5 426 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 MDGA2Q7Z553 956 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 CLECL1Q8IZS7 167 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 SLC22A24Q8N4F4 322 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 NAT6Q93015 286 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 OR52D1Q9H346 318 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 NECAP2Q9NVZ3 263 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 TO15178 435 aa13.49□□□□□ -0.25
PTPN13-203ENST00000427191 MGST1P10620 155 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms