RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 ETAA1Q9NY74 926 aa12.83□□□□□ -0.36
RPL28-202ENST00000426763 UBAP1Q9NZ09 502 aa12.83□□□□□ -0.36
RPL28-202ENST00000426763 ALPLP05186 524 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 ZNF615Q8N8J6 731 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 OR5J2Q8NH18 312 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 AKAP1Q92667 903 aaKnown RBP eCLIP12.82□□□□□ -0.363e-7■■■□□ 16.9
RPL28-202ENST00000426763 SDF2Q99470 211 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 CALHM2Q9HA72 323 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 MT-ATP6P00846 226 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 NXPH1P58417 271 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 TMEM151AQ8N4L1 468 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 BCORP1Q8N888 145 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 OR7G2Q8NG99 324 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 C8orf44Q96CB5 159 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 SLC6A7Q99884 636 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 GMPR2Q9P2T1 348 aaKnown RBP12.82□□□□□ -0.36
RPL28-202ENST00000426763 KLF13Q9Y2Y9 288 aaPredicted RBP12.82□□□□□ -0.36
RPL28-202ENST00000426763 TMEM184BQ9Y519 407 aaPredicted RBP12.82□□□□□ -0.36
RPL28-202ENST00000426763 DCDC2BA2VCK2 349 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 CRTAPO75718 401 aaPredicted RBP12.82□□□□□ -0.36
RPL28-202ENST00000426763 TPOP07202 933 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 THBS1P07996 1170 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 APOBEC1P41238 236 aaKnown RBP12.82□□□□□ -0.36
RPL28-202ENST00000426763 MAGEA2P43356 314 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 BIDP55957 195 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 NCS1P62166 190 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 AGAP7PQ5VUJ5 663 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 C1orf140Q5VVS0 124 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 DLEU7Q6UYE1 221 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 DPY19L2P2Q6ZN68 376 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 TRAPPC6BQ86SZ2 158 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 SPERTQ8NA61 448 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 OR51T1Q8NGJ9 327 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 TMEM255BQ8WV15 326 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 CNOT9Q92600 299 aaKnown RBP12.82□□□□□ -0.36
RPL28-202ENST00000426763 SLC35A4Q96G79 324 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 AGAP4Q96P64 663 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 MNTQ99583 582 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 ELOVL3Q9HB03 270 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 A0A087WV62 115 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 ITGB2P05107 769 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 NID1P14543 1247 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 HTR5AP47898 357 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 AP2S1P53680 142 aaPredicted RBP12.82□□□□□ -0.36
RPL28-202ENST00000426763 SIRPAP78324 504 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 EIF3IQ13347 325 aaKnown RBP12.82□□□□□ -0.36
RPL28-202ENST00000426763 DHRS4L2Q6PKH6 230 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 GPBAR1Q8TDU6 330 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 RAB9BQ9NP90 201 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 NUDT15Q9NV35 164 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 R4GN57 208 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 METTL15A6NJ78 407 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 FPR3P25089 353 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 ACTBP60709 375 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 ACTG1P63261 375 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 FAM69AQ5T7M9 428 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 LRRC18Q8N456 261 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 GOT1L1Q8NHS2 421 aaPredicted RBP12.82□□□□□ -0.36
RPL28-202ENST00000426763 AMBRA1Q9C0C7 1298 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 C1orf198Q9H425 327 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 BABAM2Q9NXR7 383 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 TAS2R8Q9NYW2 309 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 DNAJB11Q9UBS4 358 aa12.82□□□□□ -0.36
RPL28-202ENST00000426763 YARS2Q9Y2Z4 477 aaKnown RBP12.82□□□□□ -0.36
RPL28-202ENST00000426763 C2orf72A6NCS6 295 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 OR7A10O76100 309 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 NPR2P20594 1047 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 CDK10Q15131 360 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 SLC36A2Q495M3 483 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 ZNF385BQ569K4 471 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 OR7E24Q6IFN5 339 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 CAMKMTQ7Z624 323 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 OR1J2Q8NGS2 313 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 NRG4Q8WWG1 115 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 ZNF587Q96SQ5 575 aaPredicted RBP12.81□□□□□ -0.36
RPL28-202ENST00000426763 INMT-MINDY4F8WBC2 141 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 MEN1O00255 615 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 HMGN4O00479 90 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 TRIM23P36406 574 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 DAPP51397 102 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 PSMA6P60900 246 aaKnown RBP12.81□□□□□ -0.36
RPL28-202ENST00000426763 ACSM3Q53FZ2 586 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 OLIG3Q7RTU3 272 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 SLC35F3Q8IY50 421 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 DNAAF1Q8NEP3 725 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 CREB3L1Q96BA8 519 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 DYNLRB1Q9NP97 96 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 EPHA8P29322 1005 aaPredicted RBP12.81□□□□□ -0.36
RPL28-202ENST00000426763 CD97P48960 835 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 ZNF91Q05481 1191 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 ILKQ13418 452 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 ZNF181Q2M3W8 571 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 RNASE10Q5GAN6 216 aaKnown RBP12.81□□□□□ -0.36
RPL28-202ENST00000426763 B3GNT8Q7Z7M8 397 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 DTX3Q8N9I9 347 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 TRMT10AQ8TBZ6 339 aaKnown RBP12.81□□□□□ -0.36
RPL28-202ENST00000426763 VSX1Q9NZR4 365 aaPredicted RBP12.81□□□□□ -0.36
RPL28-202ENST00000426763 CD300AQ9UGN4 299 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 NUP205Q92621 2012 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 TRAV6A0A075B6T7 132 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms