RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 IL17RDQ8NFM7 739 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 MIPOL1Q8TD10 442 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 AURKBQ96GD4 344 aaPredicted RBP10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SLC38A2Q96QD8 506 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 RHOXF2Q9BQY4 288 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 OCEL1Q9H607 264 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 MTHFD2LQ9H903 347 aaPredicted RBP10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 CA10Q9NS85 328 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 FLVCR1Q9Y5Y0 555 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 FBN1P35555 2871 aaKnown RBP10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ROS1P08922 2347 aa10.73□□□□□ -0.69
HLA-DQB3-203ENST00000425319 VWC2LB2RUY7 222 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 KLF11O14901 512 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 G6PDP11413 515 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 GTF2E2P29084 291 aaKnown RBP10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 TACR3P29371 465 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 RPS26P62854 115 aaKnown RBP10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 RUNX1T1Q06455 604 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 LRRC74AQ0VAA2 488 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SLC17A1Q14916 467 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 PCLAFQ15004 111 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ZSWIM7Q19AV6 140 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 DPY19L1Q2PZI1 675 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 C3orf36Q3SXR2 165 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 UGT3A2Q3SY77 523 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 TSPO2Q5TGU0 170 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 VHLLQ6RSH7 139 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 B3GLCTQ6Y288 498 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 CCDC36Q8IYA8 594 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 PEX5LQ8IYB4 626 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 RIBC1Q8N443 379 aaPredicted RBP10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 KRTCAP2Q8N6L1 136 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 EIF1ADQ8N9N8 165 aaKnown RBP10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 LINC01356Q8N9X3 169 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 TMEM45BQ96B21 275 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 DNAJA3Q96EY1 480 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 PRR14Q9BWN1 585 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 OR11A1Q9GZK7 315 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 DYNLRB1Q9NP97 96 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 MARCOQ9UEW3 520 aaPredicted RBP10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ZNF232Q9UNY5 417 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SPEF1Q9Y4P9 236 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 TLN2Q9Y4G6 2542 aa10.72□□□□□ -0.69
HLA-DQB3-203ENST00000425319 TMEM247A6NEH6 219 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 CFAP73A6NFT4 308 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 CHRNGP07510 517 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 NUDT17P0C025 328 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 OR4A8P0C604 315 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 NPR2P20594 1047 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 EDNRAP25101 427 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 PPOXP50336 477 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 CLNS1AP54105 237 aaKnown RBP10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SH3BGRP55822 239 aaPredicted RBP10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 H3F3AP84243 136 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 IFFO1Q0D2I5 559 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ATRQ13535 2644 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 REP15Q6BDI9 236 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 OR4F3Q6IEY1 312 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 TNFAIP8L2Q6P589 184 aaPredicted RBP10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ZCCHC23Q6ZST2 131 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 IL17RELQ6ZVW7 336 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 RIMKLAQ8IXN7 391 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 OR8J2Q8NGG1 315 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 WDR60Q8WVS4 1066 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 BOD1Q96IK1 185 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 APOPT1Q96IL0 206 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SORCS2Q96PQ0 1159 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SAP130Q9H0E3 1048 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 CALML5Q9NZT1 146 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 OSGIN1Q9UJX0 560 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 NOX1Q9Y5S8 564 aa10.71□□□□□ -0.69
HLA-DQB3-203ENST00000425319 DNHD1Q96M86 4753 aa10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 ABCA1O95477 2261 aa10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 VPS13CQ709C8 3753 aa10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 A0A096LPI6 279 aa10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 SLC35F4A4IF30 521 aa10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 TMEM233B4DJY2 109 aa10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 PDLIM1O00151 329 aa10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 AKAP8O43823 692 aaKnown RBP10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 LY6HO94772 140 aa10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 STAMBPO95630 424 aa10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 DBIP07108 87 aaKnown RBP10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 FAM153BP0C7A2 387 aa10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 MYZAPP0CAP1 466 aa10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 NR2F1P10589 423 aa10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 DAOP14920 347 aa10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 IFNGR1P15260 489 aa10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 NCF2P19878 526 aaPredicted RBP10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 APEX1P27695 318 aaKnown RBP10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 S100A3P33764 101 aa10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 CEACAM7Q14002 265 aa10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 OR7A5Q15622 319 aa10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 EFNB3Q15768 340 aa10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 TBRG1Q3YBR2 411 aa10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 XKR7Q5GH72 579 aa10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 TYW3Q6IPR3 259 aaKnown RBP10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 ANKRD16Q6P6B7 361 aa10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 EMBQ6PCB8 327 aa10.7□□□□□ -0.7
HLA-DQB3-203ENST00000425319 SHQ1Q6PI26 577 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 232.5 ms