RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 ZNF781Q8N8C0 355 aa13.07□□□□□ -0.32
ATG4B-209ENST00000425239 ANKFN1Q8N957 763 aa13.07□□□□□ -0.32
ATG4B-209ENST00000425239 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.07□□□□□ -0.326e-11■■■■■ 51.9
ATG4B-209ENST00000425239 MSI2Q96DH6 328 aaKnown RBP13.07□□□□□ -0.32
ATG4B-209ENST00000425239 TEX37Q96LM6 180 aa13.07□□□□□ -0.32
ATG4B-209ENST00000425239 SORCS2Q96PQ0 1159 aa13.07□□□□□ -0.32
ATG4B-209ENST00000425239 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.07□□□□□ -0.32
ATG4B-209ENST00000425239 LPAR3Q9UBY5 353 aa13.07□□□□□ -0.32
ATG4B-209ENST00000425239 PCDHGB4Q9UN71 923 aa13.07□□□□□ -0.32
ATG4B-209ENST00000425239 MOKQ9UQ07 419 aa13.07□□□□□ -0.32
ATG4B-209ENST00000425239 SLC9A8Q9Y2E8 581 aa13.07□□□□□ -0.32
ATG4B-209ENST00000425239 AMDHD2Q9Y303 409 aa13.07□□□□□ -0.32
ATG4B-209ENST00000425239 ATP23Q9Y6H3 246 aa13.07□□□□□ -0.32
ATG4B-209ENST00000425239 CPSF4O95639 269 aaKnown RBP13.06□□□□□ -0.32
ATG4B-209ENST00000425239 CHRM4P08173 479 aa13.06□□□□□ -0.32
ATG4B-209ENST00000425239 MPGP29372 298 aa13.06□□□□□ -0.32
ATG4B-209ENST00000425239 NR4A2P43354 598 aa13.06□□□□□ -0.32
ATG4B-209ENST00000425239 MAP2K6P52564 334 aa13.06□□□□□ -0.32
ATG4B-209ENST00000425239 CHRNB3Q05901 458 aa13.06□□□□□ -0.32
ATG4B-209ENST00000425239 HIKESHIQ53FT3 197 aa13.06□□□□□ -0.32
ATG4B-209ENST00000425239 SPANXN4Q5MJ08 99 aa13.06□□□□□ -0.32
ATG4B-209ENST00000425239 ATAD3BQ5T9A4 648 aa13.06□□□□□ -0.32
ATG4B-209ENST00000425239 CASP12Q6UXS9 341 aa13.06□□□□□ -0.32
ATG4B-209ENST00000425239 LINGO2Q7L985 606 aa13.06□□□□□ -0.32
ATG4B-209ENST00000425239 CMIPQ8IY22 773 aa13.06□□□□□ -0.32
ATG4B-209ENST00000425239 TMEM99Q8N816 258 aa13.06□□□□□ -0.32
ATG4B-209ENST00000425239 PMM1Q92871 262 aa13.06□□□□□ -0.32
ATG4B-209ENST00000425239 TRNT1Q96Q11 434 aaKnown RBP13.06□□□□□ -0.32
ATG4B-209ENST00000425239 SORT1Q99523 831 aa13.06□□□□□ -0.32
ATG4B-209ENST00000425239 SOX7Q9BT81 388 aa13.06□□□□□ -0.32
ATG4B-209ENST00000425239 FKRPQ9H9S5 495 aa13.06□□□□□ -0.32
ATG4B-209ENST00000425239 PMF1-BGLAPU3KQ54 211 aa13.06□□□□□ -0.32
ATG4B-209ENST00000425239 IGHV1-18A0A0C4DH31 117 aa13.05□□□□□ -0.32
ATG4B-209ENST00000425239 IGHV4-61A0A0C4DH41 118 aa13.05□□□□□ -0.32
ATG4B-209ENST00000425239 LIPT2A6NK58 231 aa13.05□□□□□ -0.32
ATG4B-209ENST00000425239 CSF3P09919 207 aa13.05□□□□□ -0.32
ATG4B-209ENST00000425239 ACAA2P42765 397 aaKnown RBP13.05□□□□□ -0.32
ATG4B-209ENST00000425239 POLR2HP52434 150 aaKnown RBP13.05□□□□□ -0.32
ATG4B-209ENST00000425239 PRPS1P60891 318 aa13.05□□□□□ -0.32
ATG4B-209ENST00000425239 EPS8Q12929 822 aa13.05□□□□□ -0.32
ATG4B-209ENST00000425239 FAM120AOSQ5T036 256 aa13.05□□□□□ -0.32
ATG4B-209ENST00000425239 ANXA8L1Q5VT79 327 aa13.05□□□□□ -0.32
ATG4B-209ENST00000425239 LRRC74BQ6ZQY2 392 aa13.05□□□□□ -0.32
ATG4B-209ENST00000425239 OR9K2Q8NGE7 335 aa13.05□□□□□ -0.32
ATG4B-209ENST00000425239 DDIT4LQ96D03 193 aa13.05□□□□□ -0.32
ATG4B-209ENST00000425239 PPP1R36Q96LQ0 422 aa13.05□□□□□ -0.32
ATG4B-209ENST00000425239 CCDC115Q96NT0 180 aa13.05□□□□□ -0.32
ATG4B-209ENST00000425239 FOXN4Q96NZ1 517 aa13.05□□□□□ -0.32
ATG4B-209ENST00000425239 SF3B5Q9BWJ5 86 aaKnown RBP13.05□□□□□ -0.32
ATG4B-209ENST00000425239 ROPN1BQ9BZX4 212 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-209ENST00000425239 DPY30Q9C005 99 aa13.05□□□□□ -0.32
ATG4B-209ENST00000425239 SHARPINQ9H0F6 387 aa13.05□□□□□ -0.32
ATG4B-209ENST00000425239 MTHFD2LQ9H903 347 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-209ENST00000425239 ROPN1Q9HAT0 212 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-209ENST00000425239 CRNNQ9UBG3 495 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-209ENST00000425239 UPB1Q9UBR1 384 aa13.05□□□□□ -0.32
ATG4B-209ENST00000425239 MARCOQ9UEW3 520 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-209ENST00000425239 HAO1Q9UJM8 370 aa13.05□□□□□ -0.32
ATG4B-209ENST00000425239 CHST2Q9Y4C5 530 aa13.05□□□□□ -0.32
ATG4B-209ENST00000425239 NDUFS8O00217 210 aa13.04□□□□□ -0.32
ATG4B-209ENST00000425239 KLF11O14901 512 aa13.04□□□□□ -0.32
ATG4B-209ENST00000425239 AKR7A3O95154 331 aa13.04□□□□□ -0.32
ATG4B-209ENST00000425239 IGFBP1P08833 259 aaPredicted RBP13.04□□□□□ -0.32
ATG4B-209ENST00000425239 BMP4P12644 408 aa13.04□□□□□ -0.32
ATG4B-209ENST00000425239 IL12AP29459 219 aa13.04□□□□□ -0.32
ATG4B-209ENST00000425239 GZMKP49863 264 aa13.04□□□□□ -0.32
ATG4B-209ENST00000425239 MVDP53602 400 aa13.04□□□□□ -0.32
ATG4B-209ENST00000425239 LGALS3BPQ08380 585 aa13.04□□□□□ -0.32
ATG4B-209ENST00000425239 CEACAM7Q14002 265 aa13.04□□□□□ -0.32
ATG4B-209ENST00000425239 PDCD2Q16342 344 aaPredicted RBP13.04□□□□□ -0.32
ATG4B-209ENST00000425239 GPAT3Q53EU6 434 aa13.04□□□□□ -0.32
ATG4B-209ENST00000425239 IL17RELQ6ZVW7 336 aa13.04□□□□□ -0.32
ATG4B-209ENST00000425239 RNF130Q86XS8 419 aa13.04□□□□□ -0.32
ATG4B-209ENST00000425239 NUDCD3Q8IVD9 361 aa13.04□□□□□ -0.32
ATG4B-209ENST00000425239 BCL2L2Q92843 193 aaPredicted RBP13.04□□□□□ -0.32
ATG4B-209ENST00000425239 FBXO17Q96EF6 278 aa13.04□□□□□ -0.32
ATG4B-209ENST00000425239 PKNOX2Q96KN3 472 aa13.04□□□□□ -0.32
ATG4B-209ENST00000425239 SLC35A5Q9BS91 424 aa13.04□□□□□ -0.32
ATG4B-209ENST00000425239 NAA11Q9BSU3 229 aaPredicted RBP13.04□□□□□ -0.32
ATG4B-209ENST00000425239 C19orf24Q9BVV8 132 aa13.04□□□□□ -0.32
ATG4B-209ENST00000425239 NELFAQ9H3P2 528 aa13.04□□□□□ -0.32
ATG4B-209ENST00000425239 PIF1Q9H611 641 aa13.04□□□□□ -0.32
ATG4B-209ENST00000425239 RLIMQ9NVW2 624 aa13.04□□□□□ -0.32
ATG4B-209ENST00000425239 BTNL2Q9UIR0 455 aa13.04□□□□□ -0.32
ATG4B-209ENST00000425239 AQP7P3A6NL99 342 aa13.03□□□□□ -0.32
ATG4B-209ENST00000425239 NPIPB7O75200 414 aa13.03□□□□□ -0.32
ATG4B-209ENST00000425239 ALDOCP09972 364 aaKnown RBP13.03□□□□□ -0.32
ATG4B-209ENST00000425239 CDKN2CP42773 168 aa13.03□□□□□ -0.32
ATG4B-209ENST00000425239 KHKP50053 298 aa13.03□□□□□ -0.32
ATG4B-209ENST00000425239 PDLIM4P50479 330 aa13.03□□□□□ -0.32
ATG4B-209ENST00000425239 TGFBR3Q03167 851 aa13.03□□□□□ -0.32
ATG4B-209ENST00000425239 ADIPOQQ15848 244 aa13.03□□□□□ -0.32
ATG4B-209ENST00000425239 ZSWIM7Q19AV6 140 aa13.03□□□□□ -0.32
ATG4B-209ENST00000425239 COX20Q5RI15 118 aa13.03□□□□□ -0.32
ATG4B-209ENST00000425239 OTUD3Q5T2D3 398 aaPredicted RBP13.03□□□□□ -0.32
ATG4B-209ENST00000425239 MRPL2Q5T653 305 aaKnown RBP13.03□□□□□ -0.32
ATG4B-209ENST00000425239 ANKRD16Q6P6B7 361 aa13.03□□□□□ -0.32
ATG4B-209ENST00000425239 EPHX4Q8IUS5 362 aa13.03□□□□□ -0.32
ATG4B-209ENST00000425239 LRRC34Q8IZ02 419 aa13.03□□□□□ -0.32
ATG4B-209ENST00000425239 POMGNT2Q8NAT1 580 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms